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2020-06-03Delete bundled copy of PHAT.Gard Spreemann
2020-06-03Delete bundled catch library.Gard Spreemann
2020-06-01Remove spdlog and fmt from matching distance code.Arnur Nigmetov
2020-03-19Minor changes.Arnur Nigmetov
2020-03-19Remove useless symlinks.Arnur Nigmetov
2020-03-09Update md/README.Arnur Nigmetov
2020-03-09Update md/README.Arnur Nigmetov
2020-03-09Suppress warning in matching_distance, module_example.Arnur Nigmetov
2020-03-09Add tests for module slice restriction.Arnur Nigmetov
2020-03-07Fix multiple bugs in matching distance for modules, add example.Arnur Nigmetov
2020-03-06Reorganize matching_dist code, minor fixes.Arnur Nigmetov
2020-03-04Make matching distance header-only.Arnur Nigmetov
2020-03-01Keep only unique positions in module.Arnur Nigmetov
Other minor changes: 1. Remove bi-grades and unnecessary IntPoint class. 2. Remove ModulePresentation ctor from file.
2020-02-19Require first file line specify the format.Arnur Nigmetov
1. Input format must be in the first line of input file, as in RIVET. 2. Disable more unnecessary output. 3. Get rid of some warnings.
2020-02-19Fix BifiltrationProxy bug; disable debug output.Arnur Nigmetov
1. Same bifiltration was used in constructing two bifiltration proxies; the second bifiltration was ignored. Fixed. 2. Switched from spd::info to spd::debug in most places. 3. Get rid of absolute paths for test bifiltrations.
2020-02-18Rename enum.Arnur Nigmetov
2020-02-18Interim: matching distance for modulesArnur Nigmetov
1. Templatize DistanceCalculator (DiagramProvider) 2. Add BifiltrationProxy with the same interface as ModulePresentation (dimension fixed). 3. Call Hera with relative error. 4. Add class ModulePresentation. To-Do: reading module presentations from Rivet format.
2020-02-18Add matching distance code.Arnur Nigmetov