From 0cc35ad04f9c2997014d7cf62a12f697e79fb534 Mon Sep 17 00:00:00 2001 From: Arnur Nigmetov Date: Sat, 20 Jan 2018 19:11:29 +0100 Subject: Major rewrite, templatized version --- .../wasserstein/include/dnn/local/kd-tree.hpp | 57 ++++++++++++++-------- 1 file changed, 36 insertions(+), 21 deletions(-) (limited to 'geom_matching/wasserstein/include/dnn/local/kd-tree.hpp') diff --git a/geom_matching/wasserstein/include/dnn/local/kd-tree.hpp b/geom_matching/wasserstein/include/dnn/local/kd-tree.hpp index 22108aa..3a4f0eb 100644 --- a/geom_matching/wasserstein/include/dnn/local/kd-tree.hpp +++ b/geom_matching/wasserstein/include/dnn/local/kd-tree.hpp @@ -9,14 +9,14 @@ #include "def_debug_ws.h" template -dnn::KDTree:: +hera::ws::dnn::KDTree:: KDTree(const Traits& traits, HandleContainer&& handles, double _wassersteinPower): traits_(traits), tree_(std::move(handles)), wassersteinPower(_wassersteinPower) { assert(wassersteinPower >= 1.0); init(); } template template -dnn::KDTree:: +hera::ws::dnn::KDTree:: KDTree(const Traits& traits, const Range& range, double _wassersteinPower): traits_(traits), wassersteinPower(_wassersteinPower) { @@ -27,7 +27,7 @@ KDTree(const Traits& traits, const Range& range, double _wassersteinPower): template template void -dnn::KDTree:: +hera::ws::dnn::KDTree:: init(const Range& range) { size_t sz = std::distance(std::begin(range), std::end(range)); @@ -41,7 +41,7 @@ init(const Range& range) template void -dnn::KDTree:: +hera::ws::dnn::KDTree:: init() { if (tree_.empty()) @@ -61,7 +61,7 @@ init() template struct -dnn::KDTree::OrderTree +hera::ws::dnn::KDTree::OrderTree { OrderTree(HCIterator b_, HCIterator e_, size_t i_, const Traits& traits_): b(b_), e(e_), i(i_), traits(traits_) {} @@ -114,7 +114,7 @@ dnn::KDTree::OrderTree template template void -dnn::KDTree:: +hera::ws::dnn::KDTree:: search(PointHandle q, ResultsFunctor& rf) const { typedef typename HandleContainer::const_iterator HCIterator; @@ -123,7 +123,7 @@ search(PointHandle q, ResultsFunctor& rf) const if (tree_.empty()) return; - DistanceType D = std::numeric_limits::infinity(); + DistanceType D = std::numeric_limits::max(); // TODO: use tbb::scalable_allocator for the queue std::queue nodes; @@ -140,14 +140,16 @@ search(PointHandle q, ResultsFunctor& rf) const i = (i + 1) % traits().dimension(); HCIterator m = b + (e - b)/2; - DistanceType dist = pow(traits().distance(q, *m), wassersteinPower) + weights_[m - tree_.begin()]; + + DistanceType dist = (wassersteinPower == 1.0) ? traits().distance(q, *m) + weights_[m - tree_.begin()] : std::pow(traits().distance(q, *m), wassersteinPower) + weights_[m - tree_.begin()]; D = rf(*m, dist); // we are really searching w.r.t L_\infty ball; could prune better with an L_2 ball Coordinate diff = cmp.diff(q, *m); // diff returns signed distance - DistanceType diffToWasserPower = (diff > 0 ? 1.0 : -1.0) * pow(fabs(diff), wassersteinPower); + + DistanceType diffToWasserPower = (wassersteinPower == 1.0) ? diff : ((diff > 0 ? 1.0 : -1.0) * std::pow(fabs(diff), wassersteinPower)); size_t lm = m + 1 + (e - (m+1))/2 - tree_.begin(); if (e > m + 1 && diffToWasserPower - subtree_weights_[lm] >= -D) { @@ -163,7 +165,20 @@ search(PointHandle q, ResultsFunctor& rf) const template void -dnn::KDTree:: +hera::ws::dnn::KDTree:: +adjust_weights(DistanceType delta) +{ + for(auto& w : weights_) + w -= delta; + + for(auto& sw : subtree_weights_) + sw -= delta; +} + + +template +void +hera::ws::dnn::KDTree:: change_weight(PointHandle p, DistanceType w) { size_t idx = indices_[p]; @@ -246,32 +261,32 @@ change_weight(PointHandle p, DistanceType w) } template -typename dnn::KDTree::HandleDistance -dnn::KDTree:: +typename hera::ws::dnn::KDTree::HandleDistance +hera::ws::dnn::KDTree:: find(PointHandle q) const { - dnn::NNRecord nn; + hera::ws::dnn::NNRecord nn; search(q, nn); return nn.result; } template -typename dnn::KDTree::Result -dnn::KDTree:: +typename hera::ws::dnn::KDTree::Result +hera::ws::dnn::KDTree:: findR(PointHandle q, DistanceType r) const { - dnn::rNNRecord rnn(r); + hera::ws::dnn::rNNRecord rnn(r); search(q, rnn); std::sort(rnn.result.begin(), rnn.result.end()); return rnn.result; } template -typename dnn::KDTree::Result -dnn::KDTree:: +typename hera::ws::dnn::KDTree::Result +hera::ws::dnn::KDTree:: findK(PointHandle q, size_t k) const { - dnn::kNNRecord knn(k); + hera::ws::dnn::kNNRecord knn(k); search(q, knn); std::sort(knn.result.begin(), knn.result.end()); return knn.result; @@ -279,7 +294,7 @@ findK(PointHandle q, size_t k) const template -struct dnn::KDTree::CoordinateComparison +struct hera::ws::dnn::KDTree::CoordinateComparison { CoordinateComparison(size_t i, const Traits& traits): i_(i), traits_(traits) {} @@ -297,7 +312,7 @@ struct dnn::KDTree::CoordinateComparison template void -dnn::KDTree:: +hera::ws::dnn::KDTree:: printWeights(void) { #ifndef FOR_R_TDA -- cgit v1.2.3