/* Copyright 2013 IST Austria
Contributed by: Ulrich Bauer, Michael Kerber, Jan Reininghaus
This file is part of PHAT.
PHAT is free software: you can redistribute it and/or modify
it under the terms of the GNU Lesser General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
PHAT is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License
along with PHAT. If not, see . */
#pragma once
#include
#include
namespace phat {
// Note: We could even make the rep generic in the underlying Const representation
// But I cannot imagine that anything else than vector> would
// make sense
template< typename PivotColumn >
class abstract_pivot_column : public vector_vector {
public:
protected:
typedef vector_vector Base;
typedef PivotColumn pivot_column;
// For parallization purposes, it could be more than one full column
mutable thread_local_storage< pivot_column > _pivot_columns;
mutable thread_local_storage< index > pos_of_pivot_columns;
pivot_column& get_pivot_column() const {
return _pivot_columns();
}
bool is_represented_by_pivot_column( index idx ) const {
return pos_of_pivot_columns() == idx;
}
void unset_pos_of_pivot_column() {
index idx = pos_of_pivot_columns();
if( idx != -1 ) {
_pivot_columns().get_column_and_clear( this->matrix[ idx ] );
}
pos_of_pivot_columns() = -1;
}
void represent_by_pivot_column( index idx ) {
pos_of_pivot_columns() = idx;
get_pivot_column().add_column( matrix[ idx ] );
}
public:
void _set_num_cols( index nr_of_columns ) {
#pragma omp parallel for
for( int tid = 0; tid < omp_get_num_threads(); tid++ ) {
_pivot_columns[ tid ].init( nr_of_columns );
pos_of_pivot_columns[ tid ] = -1;
}
Base::_set_num_cols( nr_of_columns );
}
// replaces(!) content of 'col' with boundary of given index
void _get_col( index idx, column& col ) const {
col.clear();
if( is_represented_by_pivot_column( idx ) ) {
pivot_column& pivot_column = get_pivot_column();
pivot_column.get_column_and_clear( col );
pivot_column.add_column( col );
} else {
Base::_get_col( idx, col );
}
}
// true iff boundary of given idx is empty
bool _is_empty( index idx ) const {
return is_represented_by_pivot_column( idx ) ? get_pivot_column().empty() : Base::_is_empty( idx );
}
// largest row index of given column idx (new name for lowestOne())
index _get_max_index( index idx ) const {
if( is_represented_by_pivot_column( idx ) ) {
pivot_column& pivot_column = get_pivot_column();
if( pivot_column.empty() ) {
return -1;
} else {
return pivot_column.max_index();
}
} else {
return Base::_get_max_index( idx );
}
}
// adds column 'source' to column 'target'
void _add_to( index source, index target ) {
if( !is_represented_by_pivot_column( target ) ) {
unset_pos_of_pivot_column();
represent_by_pivot_column( target );
}
get_pivot_column().add_column( matrix[source] );
}
// clears given column
void _clear( index idx ) {
if( is_represented_by_pivot_column( idx ) ) {
column dummy;
get_pivot_column().get_column_and_clear(dummy);
} else {
Base::_clear( idx );
}
}
void _set_col( index idx, const column& col ) {
if( is_represented_by_pivot_column( idx ) ) {
column dummy;
pivot_column& pivot_column = get_pivot_column();
pivot_column.get_column_and_clear( dummy );
pivot_column.add_column( col );
} else {
Base::_set_col( idx, col );
}
}
// removes the maximal index of a column
void _remove_max( index idx ) {
_toggle( idx, _get_max_index( idx ) );
}
//// toggles given index pair
void _toggle( index col_idx, index row_idx ) {
if( !is_represented_by_pivot_column( col_idx ) ) {
unset_pos_of_pivot_column();
represent_by_pivot_column( col_idx );
}
get_pivot_column().add_index( row_idx );
}
// syncronizes all data structures (essential for openmp stuff)
// has to be called before and after any multithreaded access!
void _sync() {
#pragma omp parallel for
for( int tid = 0; tid < omp_get_num_threads(); tid++ )
unset_pos_of_pivot_column();
}
};
}