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authorRĂ©mi Flamary <remi.flamary@gmail.com>2021-06-01 10:10:54 +0200
committerGitHub <noreply@github.com>2021-06-01 10:10:54 +0200
commit184f8f4f7ac78f1dd7f653496d2753211a4e3426 (patch)
tree483a7274c91030fd644de49b03a5fad04af9deba /.github/workflows/build_tests.yml
parent1f16614954e2522fbdb1598c5b1f5c3630c68472 (diff)
[MRG] POT numpy/torch/jax backends (#249)
* add numpy and torch backends * stat sets on functions * proper import * install recent torch on windows * install recent torch on windows * now testing all functions in backedn * add jax backedn * clenaup windowds * proper convert for jax backedn * pep8 * try again windows tests * test jax conversion * try proper widows tests * emd fuction ses backedn * better test partial OT * proper tests to_numpy and teplate Backend * pep8 * pep8 x2 * feaking sinkhorn works with torch * sinkhorn2 compatible * working ot.emd2 * important detach * it should work * jax autodiff emd * pep8 * no tast same for jax * new independat tests per backedn * freaking pep8 * add tests for gradients * deprecate ot.gpu * worging dist function * working dist * dist done in backedn * not in * remove indexing * change accuacy for jax * first pull backend * projection simplex * projection simplex * projection simplex * projection simplex no ci * projection simplex no ci * projection simplex no ci * pep8 * add backedn discusion to quickstart guide * projection simplex no ci * projection simplex no ci * projection simplex no ci * pep8 + better doc * proper links * corect doctest * big debug documentation * doctest again * doctest again bis * doctest again ter (last one or i kill myself) * backend test + doc proj simplex * correction test_utils * correction test_utils * correction cumsum * correction flip * correction flip v2 * more debug * more debug * more debug + pep8 * pep8 * argh * proj_simplex * backedn works for sort * proj simplex * jax sucks * update doc * Update test/test_utils.py Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * Update docs/source/quickstart.rst Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * Update docs/source/quickstart.rst Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * Update docs/source/quickstart.rst Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * Update docs/source/readme.rst Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * Update test/test_utils.py Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * Update ot/utils.py Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * Update docs/source/readme.rst Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * Update ot/lp/__init__.py Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org> * begin comment alex * comment alex part 2 * optimize test gromov * proj_simplex on vectors * add awesome gradient decsnt example on the weights * pep98 of course * proof read example by alex * pep8 again * encoding oos in translation * correct legend Co-authored-by: Nicolas Courty <ncourty@irisa.fr> Co-authored-by: Alexandre Gramfort <alexandre.gramfort@m4x.org>
Diffstat (limited to '.github/workflows/build_tests.yml')
-rw-r--r--.github/workflows/build_tests.yml9
1 files changed, 5 insertions, 4 deletions
diff --git a/.github/workflows/build_tests.yml b/.github/workflows/build_tests.yml
index 2fc6770..92a07b5 100644
--- a/.github/workflows/build_tests.yml
+++ b/.github/workflows/build_tests.yml
@@ -40,7 +40,7 @@ jobs:
pip install -e .
- name: Run tests
run: |
- python -m pytest -v test/ ot/ --doctest-modules --ignore ot/gpu/ --cov=ot
+ python -m pytest -v test/ ot/ --doctest-modules --ignore ot/gpu/ --cov=ot --color=yes
- name: Upload codecov
run: |
codecov
@@ -142,11 +142,12 @@ jobs:
- name: Install dependencies
run: |
python -m pip install --upgrade pip
- pip install -r requirements.txt
- pip install pytest "pytest-cov<2.6"
+ python -m pip install -r .github/requirements_test_windows.txt
+ python -m pip install torch==1.8.1+cpu -f https://download.pytorch.org/whl/torch_stable.html
+ python -m pip install pytest "pytest-cov<2.6"
- name: Install POT
run: |
- pip install -e .
+ python -m pip install -e .
- name: Run tests
run: |
python -m pytest -v test/ ot/ --doctest-modules --ignore ot/gpu/ --cov=ot