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authorRémi Flamary <remi.flamary@gmail.com>2020-04-20 15:19:09 +0200
committerRémi Flamary <remi.flamary@gmail.com>2020-04-20 15:19:09 +0200
commite65606ae498bd611f6a994868c2a66dfbea403cd (patch)
treeb9b43dcaf8499b6d57b806ce04350fb6b792537f /docs/source/auto_examples/plot_OT_1D.rst
parent8acaf262baa04a4d2bdd9c774c45c5bb2fb2d12a (diff)
big update examples
Diffstat (limited to 'docs/source/auto_examples/plot_OT_1D.rst')
-rw-r--r--docs/source/auto_examples/plot_OT_1D.rst133
1 files changed, 81 insertions, 52 deletions
diff --git a/docs/source/auto_examples/plot_OT_1D.rst b/docs/source/auto_examples/plot_OT_1D.rst
index b97d67c..ec21845 100644
--- a/docs/source/auto_examples/plot_OT_1D.rst
+++ b/docs/source/auto_examples/plot_OT_1D.rst
@@ -1,6 +1,12 @@
+.. only:: html
+
+ .. note::
+ :class: sphx-glr-download-link-note
+ Click :ref:`here <sphx_glr_download_auto_examples_plot_OT_1D.py>` to download the full example code
+ .. rst-class:: sphx-glr-example-title
-.. _sphx_glr_auto_examples_plot_OT_1D.py:
+ .. _sphx_glr_auto_examples_plot_OT_1D.py:
====================
@@ -12,8 +18,7 @@ and their visualization.
-
-.. code-block:: python
+.. code-block:: default
# Author: Remi Flamary <remi.flamary@unice.fr>
@@ -32,17 +37,14 @@ and their visualization.
+
Generate data
-------------
-
-.. code-block:: python
+.. code-block:: default
-
- #%% parameters
-
n = 100 # nb bins
# bin positions
@@ -63,55 +65,60 @@ Generate data
+
Plot distributions and loss matrix
----------------------------------
+.. code-block:: default
-.. code-block:: python
-
-
- #%% plot the distributions
pl.figure(1, figsize=(6.4, 3))
pl.plot(x, a, 'b', label='Source distribution')
pl.plot(x, b, 'r', label='Target distribution')
pl.legend()
- #%% plot distributions and loss matrix
- pl.figure(2, figsize=(5, 5))
- ot.plot.plot1D_mat(a, b, M, 'Cost matrix M')
+.. image:: /auto_examples/images/sphx_glr_plot_OT_1D_001.png
+ :class: sphx-glr-single-img
-.. rst-class:: sphx-glr-horizontal
+.. rst-class:: sphx-glr-script-out
+ Out:
- *
+ .. code-block:: none
- .. image:: /auto_examples/images/sphx_glr_plot_OT_1D_001.png
- :scale: 47
- *
+ <matplotlib.legend.Legend object at 0x7f4c75f9fcc0>
- .. image:: /auto_examples/images/sphx_glr_plot_OT_1D_002.png
- :scale: 47
+.. code-block:: default
+
+
+ pl.figure(2, figsize=(5, 5))
+ ot.plot.plot1D_mat(a, b, M, 'Cost matrix M')
+
-Solve EMD
----------
+.. image:: /auto_examples/images/sphx_glr_plot_OT_1D_002.png
+ :class: sphx-glr-single-img
-.. code-block:: python
- #%% EMD
+
+Solve EMD
+---------
+
+
+.. code-block:: default
+
G0 = ot.emd(a, b, M)
@@ -121,8 +128,9 @@ Solve EMD
-.. image:: /auto_examples/images/sphx_glr_plot_OT_1D_005.png
- :align: center
+.. image:: /auto_examples/images/sphx_glr_plot_OT_1D_003.png
+ :class: sphx-glr-single-img
+
@@ -131,12 +139,8 @@ Solve Sinkhorn
--------------
+.. code-block:: default
-.. code-block:: python
-
-
-
- #%% Sinkhorn
lambd = 1e-3
Gs = ot.sinkhorn(a, b, M, lambd, verbose=True)
@@ -148,46 +152,71 @@ Solve Sinkhorn
-.. image:: /auto_examples/images/sphx_glr_plot_OT_1D_007.png
- :align: center
+.. image:: /auto_examples/images/sphx_glr_plot_OT_1D_004.png
+ :class: sphx-glr-single-img
.. rst-class:: sphx-glr-script-out
- Out::
+ Out:
+ .. code-block:: none
+
+ It. |Err
+ -------------------
+ 0|2.861463e-01|
+ 10|1.860154e-01|
+ 20|8.144529e-02|
+ 30|3.130143e-02|
+ 40|1.178815e-02|
+ 50|4.426078e-03|
+ 60|1.661047e-03|
+ 70|6.233110e-04|
+ 80|2.338932e-04|
+ 90|8.776627e-05|
+ 100|3.293340e-05|
+ 110|1.235791e-05|
+ 120|4.637176e-06|
+ 130|1.740051e-06|
+ 140|6.529356e-07|
+ 150|2.450071e-07|
+ 160|9.193632e-08|
+ 170|3.449812e-08|
+ 180|1.294505e-08|
+ 190|4.857493e-09|
It. |Err
-------------------
- 0|8.187970e-02|
- 10|3.460174e-02|
- 20|6.633335e-03|
- 30|9.797798e-04|
- 40|1.389606e-04|
- 50|1.959016e-05|
- 60|2.759079e-06|
- 70|3.885166e-07|
- 80|5.470605e-08|
- 90|7.702918e-09|
- 100|1.084609e-09|
- 110|1.527180e-10|
+ 200|1.822723e-09|
+ 210|6.839572e-10|
+ /home/rflamary/PYTHON/POT/examples/plot_OT_1D.py:84: UserWarning: Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
+ pl.show()
+
+
-**Total running time of the script:** ( 0 minutes 0.561 seconds)
+.. rst-class:: sphx-glr-timing
+
+ **Total running time of the script:** ( 0 minutes 0.665 seconds)
+
+
+.. _sphx_glr_download_auto_examples_plot_OT_1D.py:
.. only :: html
.. container:: sphx-glr-footer
+ :class: sphx-glr-footer-example
+
- .. container:: sphx-glr-download
+ .. container:: sphx-glr-download sphx-glr-download-python
:download:`Download Python source code: plot_OT_1D.py <plot_OT_1D.py>`
- .. container:: sphx-glr-download
+ .. container:: sphx-glr-download sphx-glr-download-jupyter
:download:`Download Jupyter notebook: plot_OT_1D.ipynb <plot_OT_1D.ipynb>`
@@ -196,4 +225,4 @@ Solve Sinkhorn
.. rst-class:: sphx-glr-signature
- `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.readthedocs.io>`_
+ `Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_