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authorRémi Flamary <remi.flamary@gmail.com>2020-04-22 14:15:15 +0200
committerRémi Flamary <remi.flamary@gmail.com>2020-04-22 14:15:15 +0200
commit8fd50a7e9d0e7d06ea93fe6ad88413abc91ac6f9 (patch)
tree8151a8acc2e1f97b51ea58aa132a984e50051990 /docs
parentbffba0033fda3a45d7cbbde5165e09e886262ab2 (diff)
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@@ -15,82 +15,82 @@ Source Code (MIT): https://github.com/PythonOT/POT
POT provides the following generic OT solvers (links to examples):
- `OT Network Simplex
- solver <https://pythonot.github.io/auto_examples/plot_OT_1D.html>`__
+ solver <auto_examples/plot_OT_1D.html>`__
for the linear program/ Earth Movers Distance [1] .
- `Conditional
- gradient <https://pythonot.github.io/auto_examples/plot_optim_OTreg.html>`__
+ gradient <auto_examples/plot_optim_OTreg.html>`__
[6] and `Generalized conditional
- gradient <https://pythonot.github.io/auto_examples/plot_optim_OTreg.html>`__
+ gradient <auto_examples/plot_optim_OTreg.html>`__
for regularized OT [7].
- Entropic regularization OT solver with `Sinkhorn Knopp
- Algorithm <https://pythonot.github.io/auto_examples/plot_OT_1D.html>`__
+ Algorithm <auto_examples/plot_OT_1D.html>`__
[2] , stabilized version [9] [10], greedy Sinkhorn [22] and
`Screening Sinkhorn
- [26] <https://pythonot.github.io/auto_examples/plot_screenkhorn_1D.html>`__
+ [26] <auto_examples/plot_screenkhorn_1D.html>`__
with optional GPU implementation (requires cupy).
- Bregman projections for `Wasserstein
- barycenter <https://pythonot.github.io/auto_examples/plot_barycenter_lp_vs_entropic.html>`__
+ barycenter <auto_examples/plot_barycenter_lp_vs_entropic.html>`__
[3], `convolutional
- barycenter <https://pythonot.github.io/auto_examples/plot_convolutional_barycenter.html>`__
+ barycenter <auto_examples/plot_convolutional_barycenter.html>`__
[21] and unmixing [4].
- Sinkhorn divergence [23] and entropic regularization OT from
empirical data.
- `Smooth optimal transport
- solvers <https://pythonot.github.io/auto_examples/plot_OT_1D_smooth.html>`__
+ solvers <auto_examples/plot_OT_1D_smooth.html>`__
(dual and semi-dual) for KL and squared L2 regularizations [17].
- Non regularized `Wasserstein barycenters
- [16] <https://pythonot.github.io/auto_examples/plot_barycenter_lp_vs_entropic.html>`__)
+ [16] <auto_examples/plot_barycenter_lp_vs_entropic.html>`__)
with LP solver (only small scale).
- `Gromov-Wasserstein
- distances <https://pythonot.github.io/auto_examples/plot_gromov.html>`__
+ distances <auto_examples/plot_gromov.html>`__
and `GW
- barycenters <https://pythonot.github.io/auto_examples/plot_gromov_barycenter.html>`__
+ barycenters <auto_examples/plot_gromov_barycenter.html>`__
(exact [13] and regularized [12])
- `Fused-Gromov-Wasserstein distances
- solver <https://pythonot.github.io/auto_examples/plot_fgw.html#sphx-glr-auto-examples-plot-fgw-py>`__
+ solver <auto_examples/plot_fgw.html#sphx-glr-auto-examples-plot-fgw-py>`__
and `FGW
- barycenters <https://pythonot.github.io/auto_examples/plot_barycenter_fgw.html>`__
+ barycenters <auto_examples/plot_barycenter_fgw.html>`__
[24]
- `Stochastic
- solver <https://pythonot.github.io/auto_examples/plot_stochastic.html>`__
+ solver <auto_examples/plot_stochastic.html>`__
for Large-scale Optimal Transport (semi-dual problem [18] and dual
problem [19])
- Non regularized `free support Wasserstein
- barycenters <https://pythonot.github.io/auto_examples/plot_free_support_barycenter.html>`__
+ barycenters <auto_examples/plot_free_support_barycenter.html>`__
[20].
- `Unbalanced
- OT <https://pythonot.github.io/auto_examples/plot_UOT_1D.html>`__
+ OT <auto_examples/plot_UOT_1D.html>`__
with KL relaxation and
- `barycenter <https://pythonot.github.io/auto_examples/plot_UOT_barycenter_1D.html>`__
+ `barycenter <auto_examples/plot_UOT_barycenter_1D.html>`__
[10, 25].
- `Partial Wasserstein and
- Gromov-Wasserstein <https://pythonot.github.io/auto_examples/plot_partial_wass_and_gromov.html>`__
+ Gromov-Wasserstein <auto_examples/plot_partial_wass_and_gromov.html>`__
(exact [29] and entropic [3] formulations).
POT provides the following Machine Learning related solvers:
- `Optimal transport for domain
- adaptation <https://pythonot.github.io/auto_examples/plot_otda_classes.html>`__
+ adaptation <auto_examples/plot_otda_classes.html>`__
with `group lasso
- regularization <https://pythonot.github.io/auto_examples/plot_otda_classes.html>`__,
+ regularization <auto_examples/plot_otda_classes.html>`__,
`Laplacian
- regularization <https://pythonot.github.io/auto_examples/plot_otda_laplacian.html>`__
+ regularization <auto_examples/plot_otda_laplacian.html>`__
[5] [30] and `semi supervised
- setting <https://pythonot.github.io/auto_examples/plot_otda_semi_supervised.html>`__.
+ setting <auto_examples/plot_otda_semi_supervised.html>`__.
- `Linear OT
- mapping <https://pythonot.github.io/auto_examples/plot_otda_linear_mapping.html>`__
+ mapping <auto_examples/plot_otda_linear_mapping.html>`__
[14] and `Joint OT mapping
- estimation <https://pythonot.github.io/auto_examples/plot_otda_mapping.html>`__
+ estimation <auto_examples/plot_otda_mapping.html>`__
[8].
- `Wasserstein Discriminant
- Analysis <https://pythonot.github.io/auto_examples/plot_WDA.html>`__
+ Analysis <auto_examples/plot_WDA.html>`__
[11] (requires autograd + pymanopt).
- `JCPOT algorithm for multi-source domain adaptation with target
- shift <https://pythonot.github.io/auto_examples/plot_otda_jcpot.html>`__
+ shift <auto_examples/plot_otda_jcpot.html>`__
[27].
Some demonstrations are available in the
-`documentation <https://pythonot.github.io/auto_examples/index.html>`__.
+`documentation <auto_examples/index.html>`__.
Using and citing the toolbox
^^^^^^^^^^^^^^^^^^^^^^^^^^^^