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authorRĂ©mi Flamary <remi.flamary@gmail.com>2019-03-11 16:59:57 +0100
committerGitHub <noreply@github.com>2019-03-11 16:59:57 +0100
commite757b75976ece1e6e53e655852b9f8863e7b6f5a (patch)
treefc0383786c3b997a1c205749018cfc52114fc2fd /ot
parent90d04e0f9a3e70d76c9a42b9bbc9c6f6a168269c (diff)
parentfea0c38c4260788c0359547f7caf75a3d92a2b42 (diff)
Merge pull request #76 from rflamary/bug_log_greenkhorn
Bug Greenkhorn with log=True closes Issue #75
Diffstat (limited to 'ot')
-rw-r--r--ot/bregman.py14
1 files changed, 13 insertions, 1 deletions
diff --git a/ot/bregman.py b/ot/bregman.py
index 43340f7..013bc33 100644
--- a/ot/bregman.py
+++ b/ot/bregman.py
@@ -120,7 +120,8 @@ def sinkhorn(a, b, M, reg, method='sinkhorn', numItermax=1000,
print('Warning : unknown method using classic Sinkhorn Knopp')
def sink():
- return sinkhorn_knopp(a, b, M, reg, **kwargs)
+ return sinkhorn_knopp(a, b, M, reg, numItermax=numItermax,
+ stopThr=stopThr, verbose=verbose, log=log, **kwargs)
return sink()
@@ -499,6 +500,15 @@ def greenkhorn(a, b, M, reg, numItermax=10000, stopThr=1e-9, verbose=False, log=
"""
+ a = np.asarray(a, dtype=np.float64)
+ b = np.asarray(b, dtype=np.float64)
+ M = np.asarray(M, dtype=np.float64)
+
+ if len(a) == 0:
+ a = np.ones((M.shape[0],), dtype=np.float64) / M.shape[0]
+ if len(b) == 0:
+ b = np.ones((M.shape[1],), dtype=np.float64) / M.shape[1]
+
n = a.shape[0]
m = b.shape[0]
@@ -514,7 +524,9 @@ def greenkhorn(a, b, M, reg, numItermax=10000, stopThr=1e-9, verbose=False, log=
viol = G.sum(1) - a
viol_2 = G.sum(0) - b
stopThr_val = 1
+
if log:
+ log = dict()
log['u'] = u
log['v'] = v