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2021-12-09[MRG] Tensorflow backend & Benchmarker & Myst_parser (#316)Nathan Cassereau
* First batch of tf methods (to be continued) * Second batch of method (yet to debug) * tensorflow for cpu * add tf requirement * pep8 + bug * small changes * attempt to solve pymanopt bug with tf2 * attempt #2 * attempt #3 * attempt 4 * docstring * correct pep8 violation introduced in merge conflicts resolution * attempt 5 * attempt 6 * just a random try * Revert "just a random try" This reverts commit 8223e768bfe33635549fb66cca2267514a60ebbf. * GPU tests for tensorflow * pep8 * attempt to solve issue with m2r2 * Remove transpose backend method * first draft of benchmarker (need to correct time measurement) * prettier bench table * Bitsize and prettier device methods * prettified table bench * Bug corrected (results were mixed up in the final table) * Better perf counter (for GPU support) * pep8 * EMD bench * solve bug if no GPU available * pep8 * warning about tensorflow numpy api being required in the backend.py docstring * Bug solve in backend docstring * not covering code which requires a GPU * Tensorflow gradients manipulation tested * Number of warmup runs is now customizable * typo * Remove some warnings while building docs * Change prettier_device to device_type in backend * Correct JAX mistakes preventing to see the CPU if a GPU is present * Attempt to solve JAX bug in case no GPU is found * Reworked benchmarks order and results storage & clear GPU after usage by benchmark * Add bench to backend docstring * better benchs * remove useless stuff * Better device_type * Now using MYST_PARSER and solving links issue in the README.md / online docs
2021-11-03[MRG] Docs updates (#298)ncassereau-idris
* bregman docs * sliced docs * docs partial * unbalanced docs * stochastic docs * plot docs * datasets docs * utils docs * dr docs * dr docs corrected * smooth docs * docs da * pep8 * docs gromov * more space after min and argmin * docs lp * bregman docs * bregman docs mistake corrected * pep8 Co-authored-by: Rémi Flamary <remi.flamary@gmail.com>
2021-04-19[MRG] Cleanup test warnings (#242)Rémi Flamary
* remove warnings in tests from docstrings * working tets for bregman implemneted methods * pep8
2020-08-24Fix to BaseTransport.transform_labels() (#208)Samarth Mishra
* Fix to BaseTransport.transform_labels() Issue #207 * Fix - forgot to commit
2020-04-24pep8Rémi Flamary
2020-04-24add ferradans to da classes documentationRémi Flamary
2020-04-24better documentationRémi Flamary
2020-04-20added defaults for emd_laplaceievred
2020-04-20added defaults for emd_laplaceievred
2020-04-20sim+sim param fixedievred
2020-04-20added kwargs to sim + docievred
2020-04-17added regulrization from [6]+fix other issuesievred
2020-04-16references addedievred
2020-04-15import laplacianievred
2020-04-15Merge branch 'master' into laplace_daIevgen Redko
2020-04-15check conflict daievred
2020-04-15fix soft labels, remove gammas from jcpotievred
2020-04-08added label normalization to utilsievred
2020-04-08add label prop + inverseievred
2020-04-08remove blank lineievred
2020-04-08remove jcpot from laplaceievred
2020-04-08test+utils+readmeievred
2020-04-08remove laplace from jcpotievred
2020-04-03autopep+remove sinkhorn+add simtypeievred
2020-04-03v2 laplace emd sinkhornievred
2020-04-01fix imports remove checksievred
2020-03-31readme move to bregmanievred
2020-03-31v1 jcpot example testievred
2020-03-31added jcpotievred
2019-08-28correct call of unbalanced with reg_mHicham Janati
2019-08-12fixes for travis, added test, minor nitsngayraud
2019-08-12Added Unbalaced transport to domain adaptation methods. Corrected small bug ↵ngayraud
related to warnings in unbalaced.py . Added an error message when user wants to normalize with other than expected cost normalization functions.
2019-06-06start documentation otRémi Flamary
2019-05-14Fixed pep8 related issuengayraud
2019-05-10Fixed multiple docstring issuesngayraud
2018-05-29remove OTDA + pep8Rémi Flamary
2018-05-09Merge pull request #42 from rflamary/linear_mappingRémi Flamary
Linear mapping + tests
2018-05-09doc typos in linear map functionRémi Flamary
2018-04-18BUG: correct typo problemsTardy Benjamin
2018-04-18BUG: typo error lo->logTardy Benjamin
2018-04-18BUG: Parameter log unusable in sinkhorn classesTardy Benjamin
2018-04-18ENH: Change the parameter type to bool in class EMDTransport documentationTardy Benjamin
2018-04-18BUG: EMDTransport parameter log unusableTardy Benjamin
2018-03-21pep cleanupRémi Flamary
2018-03-21update readme + docRémi Flamary
2018-03-20passing testsRémi Flamary
2018-03-20add class LinearTransportRémi Flamary
2018-03-20add linear mapping functionRémi Flamary
2018-02-16no more pep8 problem, need cleanup plots in test and examplesRémi Flamary
2018-02-16better pep8 but not solvedRémi Flamary
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