# -*- coding: utf-8 -*- """ ==================================================== 2D Optimal transport between empirical distributions ==================================================== @author: rflamary """ import numpy as np import matplotlib.pylab as pl import ot #%% parameters and data generation n=50 # nb samples mu_s=np.array([0,0]) cov_s=np.array([[1,0],[0,1]]) mu_t=np.array([4,4]) cov_t=np.array([[1,-.8],[-.8,1]]) xs=ot.datasets.get_2D_samples_gauss(n,mu_s,cov_s) xt=ot.datasets.get_2D_samples_gauss(n,mu_t,cov_t) a,b = ot.unif(n),ot.unif(n) # uniform distribution on samples # loss matrix M=ot.dist(xs,xt) M/=M.max() #%% plot samples pl.figure(1) pl.plot(xs[:,0],xs[:,1],'+b',label='Source samples') pl.plot(xt[:,0],xt[:,1],'xr',label='Target samples') pl.legend(loc=0) pl.title('Source and traget distributions') pl.figure(2) pl.imshow(M,interpolation='nearest') pl.title('Cost matrix M') #%% EMD G0=ot.emd(a,b,M) pl.figure(3) pl.imshow(G0,interpolation='nearest') pl.title('OT matrix G0') pl.figure(4) ot.plot.plot2D_samples_mat(xs,xt,G0,c=[.5,.5,1]) pl.plot(xs[:,0],xs[:,1],'+b',label='Source samples') pl.plot(xt[:,0],xt[:,1],'xr',label='Target samples') pl.legend(loc=0) pl.title('OT matrix with samples') #%% sinkhorn # reg term lambd=5e-4 Gs=ot.sinkhorn(a,b,M,lambd) pl.figure(5) pl.imshow(Gs,interpolation='nearest') pl.title('OT matrix sinkhorn') pl.figure(6) ot.plot.plot2D_samples_mat(xs,xt,Gs,color=[.5,.5,1]) pl.plot(xs[:,0],xs[:,1],'+b',label='Source samples') pl.plot(xt[:,0],xt[:,1],'xr',label='Target samples') pl.legend(loc=0) pl.title('OT matrix Sinkhorn with samples')