import numpy as np import ot import time import pytest try: # test if cudamat installed import ot.gpu nogpu = False except ImportError: nogpu = True @pytest.mark.skipif(nogpu, reason="No GPU available") def test_gpu_sinkhorn(): np.random.seed(0) def describeRes(r): print("min:{:.3E}, max::{:.3E}, mean::{:.3E}, std::{:.3E}".format( np.min(r), np.max(r), np.mean(r), np.std(r))) for n in [50, 100, 500, 1000]: print(n) a = np.random.rand(n // 4, 100) b = np.random.rand(n, 100) time1 = time.time() transport = ot.da.OTDA_sinkhorn() transport.fit(a, b) G1 = transport.G time2 = time.time() transport = ot.gpu.da.OTDA_sinkhorn() transport.fit(a, b) G2 = transport.G time3 = time.time() print("Normal sinkhorn, time: {:6.2f} sec ".format(time2 - time1)) describeRes(G1) print(" GPU sinkhorn, time: {:6.2f} sec ".format(time3 - time2)) describeRes(G2) assert np.allclose(G1, G2, rtol=1e-5, atol=1e-5) @pytest.mark.skipif(nogpu, reason="No GPU available") def test_gpu_sinkhorn_lpl1(): np.random.seed(0) def describeRes(r): print("min:{:.3E}, max:{:.3E}, mean:{:.3E}, std:{:.3E}" .format(np.min(r), np.max(r), np.mean(r), np.std(r))) for n in [50, 100, 500]: print(n) a = np.random.rand(n // 4, 100) labels_a = np.random.randint(10, size=(n // 4)) b = np.random.rand(n, 100) time1 = time.time() transport = ot.da.OTDA_lpl1() transport.fit(a, labels_a, b) G1 = transport.G time2 = time.time() transport = ot.gpu.da.OTDA_lpl1() transport.fit(a, labels_a, b) G2 = transport.G time3 = time.time() print("Normal sinkhorn lpl1, time: {:6.2f} sec ".format( time2 - time1)) describeRes(G1) print(" GPU sinkhorn lpl1, time: {:6.2f} sec ".format( time3 - time2)) describeRes(G2) assert np.allclose(G1, G2, rtol=1e-5, atol=1e-5)