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.. only:: html
.. note::
:class: sphx-glr-download-link-note
Click :ref:`here <sphx_glr_download_auto_examples_plot_free_support_barycenter.py>` to download the full example code
.. rst-class:: sphx-glr-example-title
.. _sphx_glr_auto_examples_plot_free_support_barycenter.py:
====================================================
2D free support Wasserstein barycenters of distributions
====================================================
Illustration of 2D Wasserstein barycenters if discributions that are weighted
sum of diracs.
.. code-block:: default
# Author: Vivien Seguy <vivien.seguy@iip.ist.i.kyoto-u.ac.jp>
#
# License: MIT License
import numpy as np
import matplotlib.pylab as pl
import ot
Generate data
-------------
%% parameters and data generation
.. code-block:: default
N = 3
d = 2
measures_locations = []
measures_weights = []
for i in range(N):
n_i = np.random.randint(low=1, high=20) # nb samples
mu_i = np.random.normal(0., 4., (d,)) # Gaussian mean
A_i = np.random.rand(d, d)
cov_i = np.dot(A_i, A_i.transpose()) # Gaussian covariance matrix
x_i = ot.datasets.make_2D_samples_gauss(n_i, mu_i, cov_i) # Dirac locations
b_i = np.random.uniform(0., 1., (n_i,))
b_i = b_i / np.sum(b_i) # Dirac weights
measures_locations.append(x_i)
measures_weights.append(b_i)
Compute free support barycenter
-------------
.. code-block:: default
k = 10 # number of Diracs of the barycenter
X_init = np.random.normal(0., 1., (k, d)) # initial Dirac locations
b = np.ones((k,)) / k # weights of the barycenter (it will not be optimized, only the locations are optimized)
X = ot.lp.free_support_barycenter(measures_locations, measures_weights, X_init, b)
Plot data
---------
.. code-block:: default
pl.figure(1)
for (x_i, b_i) in zip(measures_locations, measures_weights):
color = np.random.randint(low=1, high=10 * N)
pl.scatter(x_i[:, 0], x_i[:, 1], s=b_i * 1000, label='input measure')
pl.scatter(X[:, 0], X[:, 1], s=b * 1000, c='black', marker='^', label='2-Wasserstein barycenter')
pl.title('Data measures and their barycenter')
pl.legend(loc=0)
pl.show()
.. image:: /auto_examples/images/sphx_glr_plot_free_support_barycenter_001.png
:class: sphx-glr-single-img
.. rst-class:: sphx-glr-script-out
Out:
.. code-block:: none
/home/rflamary/PYTHON/POT/examples/plot_free_support_barycenter.py:69: UserWarning: Matplotlib is currently using agg, which is a non-GUI backend, so cannot show the figure.
pl.show()
.. rst-class:: sphx-glr-timing
**Total running time of the script:** ( 0 minutes 0.080 seconds)
.. _sphx_glr_download_auto_examples_plot_free_support_barycenter.py:
.. only :: html
.. container:: sphx-glr-footer
:class: sphx-glr-footer-example
.. container:: sphx-glr-download sphx-glr-download-python
:download:`Download Python source code: plot_free_support_barycenter.py <plot_free_support_barycenter.py>`
.. container:: sphx-glr-download sphx-glr-download-jupyter
:download:`Download Jupyter notebook: plot_free_support_barycenter.ipynb <plot_free_support_barycenter.ipynb>`
.. only:: html
.. rst-class:: sphx-glr-signature
`Gallery generated by Sphinx-Gallery <https://sphinx-gallery.github.io>`_
|
