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author | Mario Mulansky <mario.mulansky@gmx.net> | 2015-05-08 18:06:59 +0200 |
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committer | Mario Mulansky <mario.mulansky@gmx.net> | 2015-05-08 18:06:59 +0200 |
commit | f688dc2e8616f914040746de845646abb158125d (patch) | |
tree | 01229c5fc4a5eee546a365595388c5159a479375 /setup.py | |
parent | 619ffd7105203938a26075c79a77d63960da9922 (diff) |
introduce backend for distance function
isi- and spike distances over complete intervals are now computed without
obtaining the profile first. This gives more than x2 performance improvements.
Diffstat (limited to 'setup.py')
-rw-r--r-- | setup.py | 5 |
1 files changed, 4 insertions, 1 deletions
@@ -22,7 +22,8 @@ else: use_cython = True if os.path.isfile("pyspike/cython/cython_add.c") and \ - os.path.isfile("pyspike/cython/cython_profiles.c"): + os.path.isfile("pyspike/cython/cython_profiles.c") and \ + os.path.isfile("pyspike/cython/cython_distances.c"): use_c = True else: use_c = False @@ -34,12 +35,14 @@ if use_cython: # Cython is available, compile .pyx -> .c ext_modules += [ Extension("pyspike.cython.cython_add", ["pyspike/cython/cython_add.pyx"]), Extension("pyspike.cython.cython_profiles", ["pyspike/cython/cython_profiles.pyx"]), + Extension("pyspike.cython.cython_distances", ["pyspike/cython/cython_distances.pyx"]), ] cmdclass.update({'build_ext': build_ext}) elif use_c: # c files are there, compile to binaries ext_modules += [ Extension("pyspike.cython.cython_add", ["pyspike/cython/cython_add.c"]), Extension("pyspike.cython.cython_profiles", ["pyspike/cython/cython_profiles.c"]), + Extension("pyspike.cython.cython_distances", ["pyspike/cython/cython_distances.c"]), ] # neither cython nor c files available -> automatic fall-back to python backend |