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2021-10-15Changelog for releaseGard Spreemann
2021-10-15TypoGard Spreemann
2021-10-15Standards-versionGard Spreemann
2021-10-15Fix broken watch fileGard Spreemann
2021-01-23Extend copyright rangesdebian/0.6.0-3Gard Spreemann
2021-01-23ChangelogGard Spreemann
2021-01-23Git to SalsaGard Spreemann
2021-01-23Drop journal reference from descriptionGard Spreemann
It's in the new upstream metadata file now.
2021-01-23Start upstream metadata fileGard Spreemann
2021-01-23DH 13 (new style)Gard Spreemann
2021-01-23Standards-versionGard Spreemann
2020-03-07Add patch to allow floating point behavior differences in tests.debian/0.6.0-2Gard Spreemann
2020-02-06Remove multi-arch support. There'll probably be byte-compiled files.new-queue/20200206debian/0.6.0-1Gard Spreemann
2020-02-06Update changelog.Gard Spreemann
2020-02-06Standards-version.Gard Spreemann
2019-07-22Allow tests to use stderr.mentors/20190722Gard Spreemann
2019-07-22Update changelog.Gard Spreemann
2019-07-22Initial autopkgtest support.Gard Spreemann
2019-07-22Simplify watch file.Gard Spreemann
2019-07-17Build-dep on nose for testing.Gard Spreemann
2019-07-17Watch file.Gard Spreemann
2019-07-17Multi-arch same.Gard Spreemann
2019-07-17Build-depend on cython.Gard Spreemann
2019-07-17Merge tag '0.6.0' into debian/sidGard Spreemann
2019-07-17Initial commit of Debian packaging.Gard Spreemann
2018-09-20Spike Order support (#39)0.6.0Mario Mulansky
* reorganized directionality module * further refactoring of directionality * completed python directionality backend * added SPIKE-Sync based filtering new function filter_by_spike_sync removes spikes that have a multi-variate Spike Sync value below some threshold not yet fully tested, python backend missing. * spike sync filtering, cython sim ann Added function for filtering out events based on a threshold for the spike sync values. Usefull for focusing on synchronous events during directionality analysis. Also added cython version of simulated annealing for performance. * added coincidence single profile to python backend missing function in python backend added, identified and fixed a bug in the implementation as well * updated test case to new spike sync behavior * python3 fixes * another python3 fix * reorganized directionality module * further refactoring of directionality * completed python directionality backend * added SPIKE-Sync based filtering new function filter_by_spike_sync removes spikes that have a multi-variate Spike Sync value below some threshold not yet fully tested, python backend missing. * spike sync filtering, cython sim ann Added function for filtering out events based on a threshold for the spike sync values. Usefull for focusing on synchronous events during directionality analysis. Also added cython version of simulated annealing for performance. * added coincidence single profile to python backend missing function in python backend added, identified and fixed a bug in the implementation as well * updated test case to new spike sync behavior * python3 fixes * another python3 fix * Fix absolute imports in directionality measures * remove commented code * Add directionality to docs, bump version * Clean up directionality module, add doxy. * Remove debug print from tests * Fix bug in calling Python backend * Fix incorrect integrals in PieceWiseConstFunc (#36) * Add (some currently failing) tests for PieceWiseConstFunc.integral * Fix implementation of PieceWiseConstFunc.integral Just by adding a special condition for when we are only taking an integral "between" two edges of a PieceWiseConstFunc All tests now pass. Fixes #33. * Add PieceWiseConstFunc.integral tests for ValueError * Add testing bounds of integral * Raise ValueError in function implementation * Fix incorrect integrals in PieceWiseLinFunc (#38) Integrals of piece-wise linear functions were incorrect if the requested interval lies completely between two support points. This has been fixed, and a unit test exercising this behavior was added. Fixes #38 * Add Spike Order example and Tutorial section Adds an example computing spike order profile and the optimal spike train order. Also adds a section on spike train order to the tutorial.
2018-02-10Merge pull request #32 from mariomulansky/remove-python33Mario Mulansky
Remove Python 3.3 from travis
2018-02-10Merge pull request #31 from jonathanjouty/masterMario Mulansky
Make merge_spike_trains work with empty spike trains, and faster
2018-02-07Remove Python 3.3 from travisMario Mulansky
Python 3.3 is not supported by scipy anymore. This removes Python 3.3 from the CI environments.
2018-02-04Make merge_spike_trains work with empty spike trains, and fasterJonathan Jouty
1. Fixes https://github.com/mariomulansky/PySpike/issues/30 2. Code is faster 3. Add test case
2017-10-04Version bumpMario Mulansky
2017-10-04Fix library status stringMario Mulansky
2017-10-04Fix typo in emailMario Mulansky
2017-10-04Merge branch 'master' of github.com:mariomulansky/PySpikeMario Mulansky
2017-10-04Update version in docs0.5.2Mario Mulansky
2017-10-04Merge pull request #27 from mariomulansky/developMario Mulansky
Merge v 0.5.2
2017-10-04defer numpy import to allow install_requires to do its job (fixes #24)Dan Meliza
2017-10-04Bump versionMario Mulansky
2017-10-04Remove Python2.6, add Python3.6 from/to CIMario Mulansky
2017-10-03Merge pull request #25 from melizalab/masterMario Mulansky
defer numpy import to allow install_requires to do its job (fixes #24)
2017-10-02defer numpy import to allow install_requires to do its job (fixes #24)Dan Meliza
2016-10-30fixed typoMario Mulansky
2016-10-30updated referencesMario Mulansky
2016-10-27Added SoftwareX reference and Spike-Order noteMario Mulansky
2016-06-19increased travis wait time for numeric testsMario Mulansky
2016-06-18added missing data files for testsMario Mulansky
2016-06-18Merge branch 'import_time_series' into developMario Mulansky
Conflicts: pyspike/__init__.py resolved
2016-06-18added function to import time seriesMario Mulansky
new function import_spike_trains_from_time_series that loads spike trains from time series.
2016-03-24bugfix for Python 3 (xrange->range)Mario Mulansky
2016-03-24quick fix in format stringMario Mulansky
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