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2015-05-18Merge branch 'master' into developMario Mulansky
Conflicts: setup.py
2015-05-18cosmeticsMario Mulansky
2015-05-17return correct values at exact spike timesMario Mulansky
pwc and pwl function object return the average of the left and right limit as function value at the exact spike times.
2015-05-13pwc function now returns intermediate value at exact spike timesMario Mulansky
2015-05-12+functions to obtain values of the pwc/pwl profileMario Mulansky
Added __call__ operators to PieceWiseConst and PieceWiseLin class for obtaining function values at certain points in time.
2015-05-11bugfix: spike_sync=1 for empty spike trainsMario Mulansky
2015-05-11treatment of empty spike trains in spike syncMario Mulansky
2015-05-11treatment of empty spike trains in spike distanceMario Mulansky
2015-05-11treatment of empty spike trains in isi functionsMario Mulansky
2015-05-11performance improvement for spike syncMario Mulansky
Additional cython implementation for overall spike sync values. It is not necessary to compute the profile anymore if only the spike sync value is required. 3x performance gain.
2015-05-08introduce backend for distance functionMario Mulansky
isi- and spike distances over complete intervals are now computed without obtaining the profile first. This gives more than x2 performance improvements.
2015-05-08renamed cython_distance module -> cython_profilesMario Mulansky
2015-05-08improved error messageMario Mulansky
2015-05-08performance improvement for multivar spike syncMario Mulansky
dont compute the average profile in the function spike_sync_multi, but rather compute the overall average distance directly
2015-05-07performance improvementsMario Mulansky
use recursive approach to compute average profile for average multivariate distances, dont compute average multivariate profile, but average distances directly.
2015-04-30addresses #5 - added __version__ propertyMario Mulansky
2015-04-28edge correction for the ISI-distanceMario Mulansky
2015-04-27adjusted PSTH, added to doc indexMario Mulansky
2015-04-27updated docsMario Mulansky
2015-04-24bugfixes for spike distanceMario Mulansky
2015-04-24renamed interval -> edges in load functionsMario Mulansky
2015-04-24renamed interval -> edges in SpikeTrainMario Mulansky
2015-04-24distance tests now pass with new spike trainsMario Mulansky
2015-04-24further adjustments in spike syncMario Mulansky
2015-04-24changed spike sync implementation to SpikeTrainMario Mulansky
2015-04-24changed spike distance to use new SpikeTrain classMario Mulansky
2015-04-23improved commentMario Mulansky
2015-04-23fixed parameter namesMario Mulansky
2015-04-23fixed some commentsMario Mulansky
2015-04-22added SpikeTrain class, changed isi_distanceMario Mulansky
spike trains are now represented as SpikeTrain objects consisting of the spike times and the interval edges. The implementation of the ISI-distance has been modified accordingly. The SPIKE-distance and SPIKE-Synchronization are still to be done.
2015-04-02add max_tau to spike sync in python backendMario Mulansky
2015-04-02added max_tau to spike_sync functionsMario Mulansky
2015-03-22no print statementMario Mulansky
2015-02-03first version of psth profileMario Mulansky
2015-02-03update docs to the structural changesMario Mulansky
2015-02-03+init pyMario Mulansky
2015-02-03moved cython functions to subdirectoryMario Mulansky
2015-02-03copyright, docsMario Mulansky
2015-02-03split distance.py into 3 separate modulesMario Mulansky
2015-01-28added missing py filesMario Mulansky
2015-01-28each function class in separate source fileMario Mulansky
2015-01-28convert return to arraysMario Mulansky
2015-01-28added smoothing functionality to spike syncMario Mulansky
2015-01-22Merge branch 'master' of https://github.com/richardtomsett/PySpike into ↵Mario Mulansky
richardtomsett-master
2015-01-20added spike sync desc to docsMario Mulansky
2015-01-20added spike sync matrixMario Mulansky
2015-01-19fixed bug for multiple intervalsMario Mulansky
2015-01-19interval averages for discrete functionsMario Mulansky
2015-01-19renamed IntervalSequence -> DiscreteFunction, cython implementation of addMario Mulansky
2015-01-19cython implementation of spike-syncMario Mulansky