Age | Commit message (Collapse) | Author | |
---|---|---|---|
2016-03-09 | deprecated old multivariate functions | Mario Mulansky | |
with the new interface, the previous functions for computing multivariate profiles and distances are obsolete. This is now noted in the docs. | |||
2016-02-02 | new generic interface for spike_sync functions | Mario Mulansky | |
Similar to the isi and spike distance functions, also the spike sync functions now support the new generic interface. | |||
2016-01-31 | generic interface for spike distance/profile | Mario Mulansky | |
spike_profile and spike_distance now have a generic interface that allows to compute bi-variate and multi-variate results with the same function. | |||
2016-01-31 | generalized interface to isi profile and distance | Mario Mulansky | |
isi profile and distance functionc an now compute bi-variate and multi-variate results. Therefore, it can be called with different "overloads". | |||
2015-12-22 | changed edge correction for single spikes | Mario Mulansky | |
Spike trains with single spikes now only get auxiliary spikes at the edges for the SPIKE distance instead of real spikes before. | |||
2015-12-18 | removed print outs from python backend | Mario Mulansky | |
2015-12-18 | bugfix for edge correction | Mario Mulansky | |
fixed bug within new edge correction (auxiliary spike was ignored in some cases) added regression test with 10000 random spike train sets | |||
2015-12-14 | removed directionality from __init__ and setup.py | Mario Mulansky | |
2015-12-14 | remove directionality from develop | Mario Mulansky | |
directionality development happens in separate branch. | |||
2015-12-14 | python backend updated for new edge correction | Mario Mulansky | |
Eero's improved edge correction now also implemented in the python backend. | |||
2015-12-14 | Merge branch 'develop' of github.com:mariomulansky/PySpike into develop | Mario Mulansky | |
2015-12-14 | improved edge correction for spike distance | Mario Mulansky | |
Improvement following Eeros suggestions to use auxiliary spike at the edges consistently with the corresponding corrected ISI intervals. | |||
2015-12-14 | py3: division | Igor Gnatenko | |
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com> | |||
2015-12-14 | py3: xrange() -> range() | Igor Gnatenko | |
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com> | |||
2015-12-14 | py3: absolute_import | Igor Gnatenko | |
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com> | |||
2015-08-17 | add python backend for directionality | Mario Mulansky | |
2015-08-17 | major renaming of spike train order functions | Mario Mulansky | |
2015-08-17 | first unit tests for directionality | Mario Mulansky | |
2015-08-17 | fix for #14 | Mario Mulansky | |
test case and fix for Issue #14. Spike-Sync function now correctly deal with empty intervals as well. | |||
2015-08-17 | fix #15 | Mario Mulansky | |
add test case and fix for Issue #15 closes #15 | |||
2015-08-13 | more directionality functions | Mario Mulansky | |
+ spike delay asymmetry profile + spike delay dual profile | |||
2015-08-12 | new spike delay asymmetry measures | Mario Mulansky | |
added first version of spike delay asymmetry functions. still incomplete and untested. | |||
2015-08-11 | Merge branch 'ImmanuelSamuel-master' into develop | Mario Mulansky | |
fixes #11 | |||
2015-08-10 | Added more // | ImmanuelSamuel | |
2015-08-10 | Used // instead of type conversion | ImmanuelSamuel | |
2015-08-10 | Syntax correction | ImmanuelSamuel | |
2015-08-10 | Indices for matrix slicing needs to be integers | ImmanuelSamuel | |
Dividing the indices by 2 gives a float which cannot be used for slicing the matrix. Changed the type of the indices to integer to ensure that matrix slicing does not return error. | |||
2015-07-07 | add disable_backend_warning property | Mario Mulansky | |
Users can now disable the warning messages produced when the cython backend is not available by writing spk.disable_backend_warning = True in the beginning | |||
2015-06-24 | fixed typo | Mario Mulansky | |
2015-06-12 | implement __getitem__ and __len__ for SpikeTrain | Mario Mulansky | |
This allows to use SpikeTrain objects to be used in many applications as if they were arrays with spike times. | |||
2015-05-18 | Merge branch 'master' into develop | Mario Mulansky | |
Conflicts: setup.py | |||
2015-05-18 | cosmetics | Mario Mulansky | |
2015-05-17 | return correct values at exact spike times | Mario Mulansky | |
pwc and pwl function object return the average of the left and right limit as function value at the exact spike times. | |||
2015-05-13 | pwc function now returns intermediate value at exact spike times | Mario Mulansky | |
2015-05-12 | +functions to obtain values of the pwc/pwl profile | Mario Mulansky | |
Added __call__ operators to PieceWiseConst and PieceWiseLin class for obtaining function values at certain points in time. | |||
2015-05-11 | bugfix: spike_sync=1 for empty spike trains | Mario Mulansky | |
2015-05-11 | treatment of empty spike trains in spike sync | Mario Mulansky | |
2015-05-11 | treatment of empty spike trains in spike distance | Mario Mulansky | |
2015-05-11 | treatment of empty spike trains in isi functions | Mario Mulansky | |
2015-05-11 | performance improvement for spike sync | Mario Mulansky | |
Additional cython implementation for overall spike sync values. It is not necessary to compute the profile anymore if only the spike sync value is required. 3x performance gain. | |||
2015-05-08 | introduce backend for distance function | Mario Mulansky | |
isi- and spike distances over complete intervals are now computed without obtaining the profile first. This gives more than x2 performance improvements. | |||
2015-05-08 | renamed cython_distance module -> cython_profiles | Mario Mulansky | |
2015-05-08 | improved error message | Mario Mulansky | |
2015-05-08 | performance improvement for multivar spike sync | Mario Mulansky | |
dont compute the average profile in the function spike_sync_multi, but rather compute the overall average distance directly | |||
2015-05-07 | performance improvements | Mario Mulansky | |
use recursive approach to compute average profile for average multivariate distances, dont compute average multivariate profile, but average distances directly. | |||
2015-04-30 | addresses #5 - added __version__ property | Mario Mulansky | |
2015-04-28 | edge correction for the ISI-distance | Mario Mulansky | |
2015-04-27 | adjusted PSTH, added to doc index | Mario Mulansky | |
2015-04-27 | updated docs | Mario Mulansky | |
2015-04-24 | bugfixes for spike distance | Mario Mulansky | |