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2015-12-14remove directionality from developMario Mulansky
directionality development happens in separate branch.
2015-12-14Merge branch 'develop' of github.com:mariomulansky/PySpike into developMario Mulansky
2015-12-14improved edge correction for spike distanceMario Mulansky
Improvement following Eeros suggestions to use auxiliary spike at the edges consistently with the corresponding corrected ISI intervals.
2015-12-14tests: allow to run out-of-treeIgor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-12-14py3: divisionIgor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-12-14py3: xrange() -> range()Igor Gnatenko
Signed-off-by: Igor Gnatenko <i.gnatenko.brain@gmail.com>
2015-08-17major renaming of spike train order functionsMario Mulansky
2015-08-17first unit tests for directionalityMario Mulansky
2015-08-17fix for #14Mario Mulansky
test case and fix for Issue #14. Spike-Sync function now correctly deal with empty intervals as well.
2015-08-17fix #15Mario Mulansky
add test case and fix for Issue #15 closes #15
2015-08-11add regression #11 test caseMario Mulansky
2015-05-17return correct values at exact spike timesMario Mulansky
pwc and pwl function object return the average of the left and right limit as function value at the exact spike times.
2015-05-13pwc function now returns intermediate value at exact spike timesMario Mulansky
2015-05-12+functions to obtain values of the pwc/pwl profileMario Mulansky
Added __call__ operators to PieceWiseConst and PieceWiseLin class for obtaining function values at certain points in time.
2015-05-11bugfix: spike_sync=1 for empty spike trainsMario Mulansky
2015-05-11treatment of empty spike trains in spike syncMario Mulansky
2015-05-11updated copyright yearMario Mulansky
2015-05-11treatment of empty spike trains in spike distanceMario Mulansky
2015-05-11treatment of empty spike trains in isi functionsMario Mulansky
2015-05-07performance improvementsMario Mulansky
use recursive approach to compute average profile for average multivariate distances, dont compute average multivariate profile, but average distances directly.
2015-04-28edge correction for the ISI-distanceMario Mulansky
2015-04-24bugfixes for spike distanceMario Mulansky
2015-04-24renamed interval -> edges in load functionsMario Mulansky
2015-04-24removed auxiliary_spike test, all tests passMario Mulansky
2015-04-24distance tests now pass with new spike trainsMario Mulansky
2015-04-24further adjustments in spike syncMario Mulansky
2015-04-24changed spike sync implementation to SpikeTrainMario Mulansky
2015-04-24changed spike distance to use new SpikeTrain classMario Mulansky
2015-04-22added SpikeTrain class, changed isi_distanceMario Mulansky
spike trains are now represented as SpikeTrain objects consisting of the spike times and the interval edges. The implementation of the ISI-distance has been modified accordingly. The SPIKE-distance and SPIKE-Synchronization are still to be done.
2015-04-02added max_tau to spike_sync functionsMario Mulansky
2015-01-28each function class in separate source fileMario Mulansky
2015-01-22better test for subsets of spike train listsMario Mulansky
added another test case to check if the computation of the multi-variate distance is correct if only a subset of the given spike trains is to be considered.
2015-01-22test mutlivariate with subset of spike trainsMario Mulansky
2015-01-20added spike sync matrixMario Mulansky
2015-01-19fixed bug for multiple intervalsMario Mulansky
2015-01-19interval averages for discrete functionsMario Mulansky
2015-01-19cython implementation of spike-syncMario Mulansky
2015-01-19final version for spike syncMario Mulansky
2014-12-26spike syncMario Mulansky
2014-10-23support for multiple averaging intervalsMario Mulansky
2014-10-22avrg functions now take intervalsMario Mulansky
2014-10-22pwc avrg now takes intervalMario Mulansky
2014-10-16deleted abs_avrg testMario Mulansky
2014-10-16added spike_matrix, refactoring dist matrix functsMario Mulansky
2014-10-16added distance testsMario Mulansky
2014-10-16changed function names distance -> profiles,Mario Mulansky
added distance functions
2014-10-16travis fixMario Mulansky
2014-10-15+average_profile functionMario Mulansky
2014-10-14changed isi distance profile to abs valuesMario Mulansky
2014-10-13changed to BSD licenseMario Mulansky
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