From ac8e9ca85a889ee2d9fe984d19976917ffdfea46 Mon Sep 17 00:00:00 2001 From: Mario Mulansky Date: Thu, 23 Oct 2014 12:48:19 +0200 Subject: +averaging example, removed empty averaging sec from docs --- examples/averages.py | 42 ++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 42 insertions(+) create mode 100644 examples/averages.py (limited to 'examples/averages.py') diff --git a/examples/averages.py b/examples/averages.py new file mode 100644 index 0000000..a06871a --- /dev/null +++ b/examples/averages.py @@ -0,0 +1,42 @@ +""" averages.py + +Simple example showing how to compute averages of distance profiles + +Copyright 2014, Mario Mulansky + +Distributed under the BSD License +""" + +from __future__ import print_function + +import pyspike as spk + +spike_trains = spk.load_spike_trains_from_txt("PySpike_testdata.txt", + time_interval=(0, 4000)) + +f = spk.isi_profile(spike_trains[0], spike_trains[1]) + +print("ISI-distance: %.8f" % f.avrg()) + +isi1 = f.avrg(interval=(0, 1000)) +isi2 = f.avrg(interval=(1000, 2000)) +isi3 = f.avrg(interval=(2000, 3000)) +isi4 = f.avrg(interval=(3000, 4000)) + +print("ISI-distance (0-1000): %.8f" % isi1) +print("ISI-distance (1000-2000): %.8f" % isi2) +print("ISI-distance (2000-3000): %.8f" % isi3) +print("ISI-distance (3000-4000): %.8f" % isi4) +print() + +print("SPIKE-distance: %.8f" % f.avrg()) + +spike1 = f.avrg(interval=(0, 1000)) +spike2 = f.avrg(interval=(1000, 2000)) +spike3 = f.avrg(interval=(2000, 3000)) +spike4 = f.avrg(interval=(3000, 4000)) + +print("SPIKE-distance (0-1000): %.8f" % spike1) +print("SPIKE-distance (1000-2000): %.8f" % spike2) +print("SPIKE-distance (2000-3000): %.8f" % spike3) +print("SPIKE-distance (3000-4000): %.8f" % spike4) -- cgit v1.2.3