from __future__ import print_function import matplotlib.pyplot as plt import pyspike as spk spike_trains = spk.load_spike_trains_from_txt("../test/SPIKE_Sync_Test.txt", edges=(0, 4000)) plt.figure() f = spk.spike_sync_profile(spike_trains[0], spike_trains[1]) x, y = f.get_plottable_data() plt.plot(x, y, '--ok', label="SPIKE-SYNC profile") print(f.x) print(f.y) print(f.mp) print("Average:", f.avrg()) f = spk.spike_profile(spike_trains[0], spike_trains[1]) x, y = f.get_plottable_data() plt.plot(x, y, '-b', label="SPIKE-profile") plt.axis([0, 4000, -0.1, 1.1]) plt.legend(loc="center right") plt.figure() plt.subplot(211) f = spk.spike_sync_profile_multi(spike_trains) x, y = f.get_plottable_data() plt.plot(x, y, '-b', alpha=0.7, label="SPIKE-Sync profile") x1, y1 = f.get_plottable_data(averaging_window_size=50) plt.plot(x1, y1, '-k', lw=2.5, label="averaged SPIKE-Sync profile") plt.subplot(212) f_psth = spk.psth(spike_trains, bin_size=50.0) x, y = f_psth.get_plottable_data() plt.plot(x, y, '-k', alpha=1.0, label="PSTH") print("Average:", f.avrg()) plt.show()