""" test_sync_filter.py Tests the spike sync based filtering Copyright 2015, Mario Mulansky Distributed under the BSD License """ from __future__ import print_function import numpy as np from numpy.testing import assert_equal, assert_almost_equal, \ assert_array_almost_equal import pyspike as spk from pyspike import SpikeTrain def test_cython(): st1 = np.array([1.0, 2.0, 3.0, 4.0]) st2 = np.array([1.1, 2.1, 3.8]) # cython implementation try: from pyspike.cython.cython_profiles import coincidence_single_profile_cython \ as coincidence_impl except ImportError: from pyspike.cython.python_backend import coincidence_single_profile_python \ as coincidence_impl sync_prof = spk.spike_sync_profile(SpikeTrain(st1, 5.0), SpikeTrain(st2, 5.0)) coincidences = np.array(coincidence_impl(st1, st2, 0, 5.0, 0.0)) for i, t in enumerate(st1): assert_equal(coincidences[i], sync_prof.y[sync_prof.x == t], "At index %d" % i) coincidences = np.array(coincidence_impl(st2, st1, 0, 5.0, 0.0)) for i, t in enumerate(st2): assert_equal(coincidences[i], sync_prof.y[sync_prof.x == t], "At index %d" % i)