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| author | Ulrich Bauer <mail@ulrich-bauer.org> | 2021-03-22 21:00:14 +0100 |
|---|---|---|
| committer | Ulrich Bauer <mail@ulrich-bauer.org> | 2021-03-22 21:00:14 +0100 |
| commit | 690f6adfaa4a9c099beeadbd6170958b453ca23c (patch) | |
| tree | cdf7b1677661f44b0d531327d0260d57af7ba9f6 | |
| parent | 473e51092fc1938eab8543aa61299cef02050d1a (diff) | |
updated readme to correctly specify default file format
| -rw-r--r-- | README.md | 6 |
1 files changed, 3 insertions, 3 deletions
@@ -74,9 +74,9 @@ A Makefile is provided with some variants of the above options. Use `make all` t The input is given either in a file whose name is passed as an argument, or through stdin. The following options are supported at the command line: - `--format`: use the specified file format for the input. The following formats are supported: - - `lower-distance` (default if no format is specified): lower triangular distance matrix; a comma (or whitespace, or other non-numerical character) separated list of the distance matrix entries below the diagonal, sorted lexicographically by row index, then column index. + - `lower-distance`: lower triangular distance matrix; a comma (or whitespace, or other non-numerical character) separated list of the distance matrix entries below the diagonal, sorted lexicographically by row index, then column index. - `upper-distance`: upper triangular distance matrix; similar to the previous, but for the entries above the diagonal; suitable for output from the MATLAB functions `pdist` or `seqpdist`, exported to a CSV file. - - `distance`: full distance matrix; similar to the above, but for all entries of the distance matrix. One line per row of the matrix; only the part below the diagonal is actually read. + - `distance` (default if no format is specified): full distance matrix; similar to the above, but for all entries of the distance matrix. One line per row of the matrix; only the part below the diagonal is actually read. - `dipha`: DIPHA distance matrix as described on the [DIPHA] website. - `point-cloud`: point cloud; a comma (or whitespace, or other non-numerical character) separated list of coordinates of the points in some Euclidean space, one point per line. - `binary`: lower distance matrix in binary file format; a sequence of the distance matrix entries below the diagonal in 32 bit float format (IEEE 754, single, little endian). @@ -128,4 +128,4 @@ Ripser is licensed under the [MIT] license (`COPYING.txt`), with an extra clause [Perseus]: <http://www.sas.upenn.edu/~vnanda/perseus/> [GUDHI]: <http://gudhi.gforge.inria.fr> [robinhoodhash]: <https://github.com/martinus/robin-hood-hashing> -[MIT]: <https://opensource.org/licenses/mit-license.php>
\ No newline at end of file +[MIT]: <https://opensource.org/licenses/mit-license.php> |