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| author | cjamin <cjamin@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2017-11-15 15:57:48 +0000 |
|---|---|---|
| committer | cjamin <cjamin@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2017-11-15 15:57:48 +0000 |
| commit | 6dbf0ab8f84fd57d4fb80cd3c1bcf0aca6f0bb05 (patch) | |
| tree | c840646b2caf395ed6672f1f3c847f7aeb1a9f00 /src/Alpha_complex/utilities | |
| parent | 048108b77120bf7b607a5093977b1da294bc472b (diff) | |
Doc
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2884 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: c5e0a65a484a71d8a9fc1fc2b695dd20a367fd0c
Diffstat (limited to 'src/Alpha_complex/utilities')
| -rw-r--r-- | src/Alpha_complex/utilities/CMakeLists.txt | 4 | ||||
| -rw-r--r-- | src/Alpha_complex/utilities/README | 17 |
2 files changed, 19 insertions, 2 deletions
diff --git a/src/Alpha_complex/utilities/CMakeLists.txt b/src/Alpha_complex/utilities/CMakeLists.txt index 120ca416..18699650 100644 --- a/src/Alpha_complex/utilities/CMakeLists.txt +++ b/src/Alpha_complex/utilities/CMakeLists.txt @@ -17,9 +17,9 @@ if(CGAL_FOUND) add_test(NAME Alpha_complex_utilities_alpha_complex_3d_persistence COMMAND $<TARGET_FILE:alpha_complex_3d_persistence> "${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off" "2" "0.45") - add_test(NAME Persistent_cohomology_example_exact_alpha_complex_3d COMMAND $<TARGET_FILE:exact_alpha_complex_3d_persistence> + add_test(NAME Alpha_complex_utilities_exact_alpha_complex_3d COMMAND $<TARGET_FILE:exact_alpha_complex_3d_persistence> "${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off" "2" "0.45") - add_test(NAME Persistent_cohomology_example_weighted_alpha_complex_3d COMMAND $<TARGET_FILE:weighted_alpha_complex_3d_persistence> + add_test(NAME Alpha_complex_utilities_weighted_alpha_complex_3d COMMAND $<TARGET_FILE:weighted_alpha_complex_3d_persistence> "${CMAKE_SOURCE_DIR}/data/points/tore3D_300.off" "${CMAKE_SOURCE_DIR}/data/points/tore3D_300.weights" "2" "0.45") install(TARGETS alpha_complex_3d_persistence DESTINATION bin) diff --git a/src/Alpha_complex/utilities/README b/src/Alpha_complex/utilities/README index 67ea1875..6e7d16b7 100644 --- a/src/Alpha_complex/utilities/README +++ b/src/Alpha_complex/utilities/README @@ -39,6 +39,23 @@ N.B.: +## `exact_alpha_complex_3d_persistence` ## +Same as `alpha_complex_3d_persistence`, but using exact computation. It is slower, but it is necessary when points are on a grid for instance. + + + +## `weighted_alpha_complex_3d_persistence` ## +Same as `alpha_complex_3d_persistence`, but using weighted points. + +**Usage** +`weighted_alpha_complex_3d_persistence <input OFF file> <input weights file> <p> <min_persistence>` +where +`<input OFF file>` is the path to the input point cloud in OFF format. +`<input weights file>` is the path to the file containing the weights of the points (one value per line). +`<p>` is the characteristic p of the coefficient field *Z/pZ* for computing homology. It must be a stricly positive integer. +`<min_persistence>` is the minimal lifetime of homology feature to be recorded. Enter a negative value to see zero length intervals. + + ## `periodic_alpha_complex_3d_persistence` ## This program computes the persistent homology with coefficient field Z/pZ of the 3D periodic alpha complex built from a 3D point cloud. The output diagram contains one bar per line, written with the convention: |