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author | vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2016-06-30 16:02:15 +0000 |
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committer | vrouvrea <vrouvrea@636b058d-ea47-450e-bf9e-a15bfbe3eedb> | 2016-06-30 16:02:15 +0000 |
commit | 8a84688f538eabfacfbbfdbf6cc8e159b1c3b412 (patch) | |
tree | e53090f1c6240168cfae190a870375892c8a8be8 /src/cython/doc/source/index.rst | |
parent | a931b662e64cca8d5ab0224c99742f3392b85f64 (diff) |
Doc with sphinx
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_cythonize@1369 636b058d-ea47-450e-bf9e-a15bfbe3eedb
Former-commit-id: ad4fe8083b2659af5f34c71fa02decf63403bce4
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diff --git a/src/cython/doc/source/index.rst b/src/cython/doc/source/index.rst new file mode 100644 index 00000000..7dfea239 --- /dev/null +++ b/src/cython/doc/source/index.rst @@ -0,0 +1,64 @@ +.. GUDHI documentation master file, created by + sphinx-quickstart on Thu Jun 30 09:55:51 2016. + You can adapt this file completely to your liking, but it should at least + contain the root `toctree` directive. + +.. toctree:: + :maxdepth: 2 + +GUDHI's documentation +##################### + +.. image:: img/Gudhi_banner.png + :align: center + +Introduction +************ + +The Gudhi library (Geometry Understanding in Higher Dimensions) is a generic +open source C++ library for Computational Topology and Topological Data +Analysis (TDA). The GUDHI library intends to help the development of new +algorithmic solutions in TDA and their transfer to applications. It provides +robust, efficient, flexible and easy to use implementations of +state-of-the-art algorithms and data structures. + +The current release of the GUDHI library includes: + +* Data structures to represent, construct and manipulate simplicial complexes. +* Algorithms to compute persistent homology and multi-field persistent homology. +* Simplication of simplicial complexes by edge contraction. + +All data-structures are generic and several of their aspects can be +parameterized via template classes. We refer to [14] for a detailed +description of the design of the library. + +Data structures +*************** + +Alpha complex +============= + +.. image:: img/alpha_complex_representation.png + :align: center + +Alpha_complex is a simplicial complex constructed from the finite cells of a +Delaunay Triangulation. + +The filtration value of each simplex is computed as the square of the +circumradius of the simplex if the circumsphere is empty (the simplex is then +said to be Gabriel), and as the minimum of the filtration values of the +codimension 1 cofaces that make it not Gabriel otherwise. All simplices that +have a filtration value strictly greater than a given alpha squared value are +not inserted into the complex. + +This package requires having CGAL version 4.7 or higher (4.8.1 is advised for +better perfomances). + +* :ref:`alphacomplex` + + +.. automodule:: gudhi + :members: + :undoc-members: + :show-inheritance: + |