Code review: rename cython as python (make target and directory

1 files changed, 0 insertions, 144 deletions

diff --git a/src/cython/include/Simplex_tree_interface.h b/src/cython/include/Simplex_tree_interface.h
deleted file mode 100644
index c15a44a5..00000000
--- a/src/cython/include/Simplex_tree_interface.h
+++ /dev/null
@@ -1,144 +0,0 @@
-/*    This file is part of the Gudhi Library. The Gudhi library
- *    (Geometric Understanding in Higher Dimensions) is a generic C++
- *    library for computational topology.
- *
- *    Author(s):       Vincent Rouvreau
- *
- *    Copyright (C) 2016 Inria
- *
- *    Modification(s):
- *      - YYYY/MM Author: Description of the modification
- */
-
-#ifndef INCLUDE_SIMPLEX_TREE_INTERFACE_H_
-#define INCLUDE_SIMPLEX_TREE_INTERFACE_H_
-
-#include <gudhi/graph_simplicial_complex.h>
-#include <gudhi/distance_functions.h>
-#include <gudhi/Simplex_tree.h>
-#include <gudhi/Points_off_io.h>
-
-#include "Persistent_cohomology_interface.h"
-
-#include <iostream>
-#include <vector>
-#include <utility>  // std::pair
-
-namespace Gudhi {
-
-template<typename SimplexTreeOptions = Simplex_tree_options_full_featured>
-class Simplex_tree_interface : public Simplex_tree<SimplexTreeOptions> {
- public:
-  using Base = Simplex_tree<SimplexTreeOptions>;
-  using Filtration_value = typename Base::Filtration_value;
-  using Vertex_handle = typename Base::Vertex_handle;
-  using Simplex_handle = typename Base::Simplex_handle;
-  using Insertion_result = typename std::pair<Simplex_handle, bool>;
-  using Simplex = std::vector<Vertex_handle>;
-  using Filtered_simplices = std::vector<std::pair<Simplex, Filtration_value>>;
-
- public:
-  bool find_simplex(const Simplex& vh) {
-    return (Base::find(vh) != Base::null_simplex());
-  }
-
-  void assign_simplex_filtration(const Simplex& vh, Filtration_value filtration) {
-    Base::assign_filtration(Base::find(vh), filtration);
-  }
-
-  bool insert(const Simplex& simplex, Filtration_value filtration = 0) {
-    Insertion_result result = Base::insert_simplex_and_subfaces(simplex, filtration);
-    return (result.second);
-  }
-
-  // Do not interface this function, only used in alpha complex interface for complex creation
-  bool insert_simplex(const Simplex& simplex, Filtration_value filtration = 0) {
-    Insertion_result result = Base::insert_simplex(simplex, filtration);
-    return (result.second);
-  }
-
-  // Do not interface this function, only used in interface for complex creation
-  bool insert_simplex_and_subfaces(const Simplex& simplex, Filtration_value filtration = 0) {
-    Insertion_result result = Base::insert_simplex_and_subfaces(simplex, filtration);
-    return (result.second);
-  }
-
-  // Do not interface this function, only used in strong witness interface for complex creation
-  bool insert_simplex(const std::vector<std::size_t>& simplex, Filtration_value filtration = 0) {
-    Insertion_result result = Base::insert_simplex(simplex, filtration);
-    return (result.second);
-  }
-
-  // Do not interface this function, only used in strong witness interface for complex creation
-  bool insert_simplex_and_subfaces(const std::vector<std::size_t>& simplex, Filtration_value filtration = 0) {
-    Insertion_result result = Base::insert_simplex_and_subfaces(simplex, filtration);
-    return (result.second);
-  }
-
-  Filtration_value simplex_filtration(const Simplex& simplex) {
-    return Base::filtration(Base::find(simplex));
-  }
-
-  void remove_maximal_simplex(const Simplex& simplex) {
-    Base::remove_maximal_simplex(Base::find(simplex));
-    Base::initialize_filtration();
-  }
-
-  Filtered_simplices get_filtration() {
-    Base::initialize_filtration();
-    Filtered_simplices filtrations;
-    for (auto f_simplex : Base::filtration_simplex_range()) {
-      Simplex simplex;
-      for (auto vertex : Base::simplex_vertex_range(f_simplex)) {
-        simplex.insert(simplex.begin(), vertex);
-      }
-      filtrations.push_back(std::make_pair(simplex, Base::filtration(f_simplex)));
-    }
-    return filtrations;
-  }
-
-  Filtered_simplices get_skeleton(int dimension) {
-    Filtered_simplices skeletons;
-    for (auto f_simplex : Base::skeleton_simplex_range(dimension)) {
-      Simplex simplex;
-      for (auto vertex : Base::simplex_vertex_range(f_simplex)) {
-        simplex.insert(simplex.begin(), vertex);
-      }
-      skeletons.push_back(std::make_pair(simplex, Base::filtration(f_simplex)));
-    }
-    return skeletons;
-  }
-
-  Filtered_simplices get_star(const Simplex& simplex) {
-    Filtered_simplices star;
-    for (auto f_simplex : Base::star_simplex_range(Base::find(simplex))) {
-      Simplex simplex_star;
-      for (auto vertex : Base::simplex_vertex_range(f_simplex)) {
-        simplex_star.insert(simplex_star.begin(), vertex);
-      }
-      star.push_back(std::make_pair(simplex_star, Base::filtration(f_simplex)));
-    }
-    return star;
-  }
-
-  Filtered_simplices get_cofaces(const Simplex& simplex, int dimension) {
-    Filtered_simplices cofaces;
-    for (auto f_simplex : Base::cofaces_simplex_range(Base::find(simplex), dimension)) {
-      Simplex simplex_coface;
-      for (auto vertex : Base::simplex_vertex_range(f_simplex)) {
-        simplex_coface.insert(simplex_coface.begin(), vertex);
-      }
-      cofaces.push_back(std::make_pair(simplex_coface, Base::filtration(f_simplex)));
-    }
-    return cofaces;
-  }
-
-  void create_persistence(Gudhi::Persistent_cohomology_interface<Base>* pcoh) {
-    Base::initialize_filtration();
-    pcoh = new Gudhi::Persistent_cohomology_interface<Base>(*this);
-  }
-};
-
-}  // namespace Gudhi
-
-#endif  // INCLUDE_SIMPLEX_TREE_INTERFACE_H_