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| author | MathieuCarriere <mathieu.carriere3@gmail.com> | 2020-03-19 17:02:55 -0400 |
|---|---|---|
| committer | MathieuCarriere <mathieu.carriere3@gmail.com> | 2020-03-19 17:02:55 -0400 |
| commit | 361abfcfa9ec18c76837f847f8e2e3a060cf7db7 (patch) | |
| tree | 159948d60884caa4993a9b4bd5924d87a29170b2 /src/python/gudhi/simplex_tree.pyx | |
| parent | 61691b0081cb868645335c0b1433ddcc0bcbf9e3 (diff) | |
added decoding function
Diffstat (limited to 'src/python/gudhi/simplex_tree.pyx')
| -rw-r--r-- | src/python/gudhi/simplex_tree.pyx | 10 |
1 files changed, 3 insertions, 7 deletions
diff --git a/src/python/gudhi/simplex_tree.pyx b/src/python/gudhi/simplex_tree.pyx index 3502000a..2cd81c14 100644 --- a/src/python/gudhi/simplex_tree.pyx +++ b/src/python/gudhi/simplex_tree.pyx @@ -415,9 +415,9 @@ cdef class SimplexTree: """ return self.get_ptr().compute_extended_filtration() - def extended_persistence(self, homology_coeff_field=11, min_persistence=0, persistence_dim_max = False): + def extended_persistence(self, homology_coeff_field=11, min_persistence=0): """This function retrieves good values for extended persistence, and separate the diagrams - into the ordinary, relative, extended+ and extended- subdiagrams. + into the Ordinary, Relative, Extended+ and Extended- subdiagrams. :param homology_coeff_field: The homology coefficient field. Must be a prime number. Default value is 11. @@ -427,10 +427,6 @@ cdef class SimplexTree: 0.0. Sets min_persistence to -1.0 to see all values. :type min_persistence: float. - :param persistence_dim_max: If true, the persistent homology for the - maximal dimension in the complex is computed. If false, it is - ignored. Default is false. - :type persistence_dim_max: bool :returns: A vector of four persistence diagrams. The first one is Ordinary, the second one is Relative, the third one is Extended+ and the fourth one is Extended-. See section 2.2 in https://link.springer.com/article/10.1007/s10208-017-9370-z for a description of these subtypes. .. note:: @@ -447,7 +443,7 @@ cdef class SimplexTree: """ cdef vector[pair[int, pair[double, double]]] persistence_result if self.pcohptr == NULL: - self.pcohptr = new Simplex_tree_persistence_interface(self.get_ptr(), persistence_dim_max) + self.pcohptr = new Simplex_tree_persistence_interface(self.get_ptr(), True) if self.pcohptr != NULL: self.pcohptr.get_persistence(homology_coeff_field, min_persistence) if self.pcohptr != NULL: |