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authorMarc Glisse <marc.glisse@inria.fr>2020-04-03 21:04:52 +0200
committerMarc Glisse <marc.glisse@inria.fr>2020-04-03 21:04:52 +0200
commit6acbc89d185d1c537778fb2d4a8503bab61fca31 (patch)
treeb8ba4b2ae1b5afc387dd6ab5497c28cfb59e65e3 /src/python/include
parent2f46606b406aafc69e37a68dca33e1858ab7b817 (diff)
Split compute_persistence from get_persistence.
Diffstat (limited to 'src/python/include')
-rw-r--r--src/python/include/Persistent_cohomology_interface.h29
1 files changed, 16 insertions, 13 deletions
diff --git a/src/python/include/Persistent_cohomology_interface.h b/src/python/include/Persistent_cohomology_interface.h
index 8c79e6f3..a29ebbee 100644
--- a/src/python/include/Persistent_cohomology_interface.h
+++ b/src/python/include/Persistent_cohomology_interface.h
@@ -23,6 +23,7 @@ template<class FilteredComplex>
class Persistent_cohomology_interface : public
persistent_cohomology::Persistent_cohomology<FilteredComplex, persistent_cohomology::Field_Zp> {
private:
+ typedef persistent_cohomology::Persistent_cohomology<FilteredComplex, persistent_cohomology::Field_Zp> Base;
/*
* Compare two intervals by dimension, then by length.
*/
@@ -43,25 +44,28 @@ persistent_cohomology::Persistent_cohomology<FilteredComplex, persistent_cohomol
public:
Persistent_cohomology_interface(FilteredComplex* stptr)
- : persistent_cohomology::Persistent_cohomology<FilteredComplex, persistent_cohomology::Field_Zp>(*stptr),
+ : Base(*stptr),
stptr_(stptr) { }
Persistent_cohomology_interface(FilteredComplex* stptr, bool persistence_dim_max)
- : persistent_cohomology::Persistent_cohomology<FilteredComplex,
- persistent_cohomology::Field_Zp>(*stptr, persistence_dim_max),
+ : Base(*stptr, persistence_dim_max),
stptr_(stptr) { }
- std::vector<std::pair<int, std::pair<double, double>>> get_persistence(int homology_coeff_field,
- double min_persistence) {
- persistent_cohomology::Persistent_cohomology<FilteredComplex,
- persistent_cohomology::Field_Zp>::init_coefficients(homology_coeff_field);
- persistent_cohomology::Persistent_cohomology<FilteredComplex,
- persistent_cohomology::Field_Zp>::compute_persistent_cohomology(min_persistence);
+ void compute_persistence(int homology_coeff_field, double min_persistence) {
+ Base::init_coefficients(homology_coeff_field);
+ Base::compute_persistent_cohomology(min_persistence);
+ }
+
+ void maybe_compute_persistence(int homology_coeff_field, double min_persistence) {
+ // Currently get_persistent_pairs safely returns an empty vector before compute_persistent_cohomology
+ if(Base::get_persistent_pairs().empty())
+ compute_persistence(homology_coeff_field, min_persistence);
+ }
+ std::vector<std::pair<int, std::pair<double, double>>> get_persistence() {
// Custom sort and output persistence
cmp_intervals_by_dim_then_length cmp(stptr_);
- auto persistent_pairs = persistent_cohomology::Persistent_cohomology<FilteredComplex,
- persistent_cohomology::Field_Zp>::get_persistent_pairs();
+ auto persistent_pairs = Base::get_persistent_pairs();
std::sort(std::begin(persistent_pairs), std::end(persistent_pairs), cmp);
std::vector<std::pair<int, std::pair<double, double>>> persistence;
@@ -74,8 +78,7 @@ persistent_cohomology::Persistent_cohomology<FilteredComplex, persistent_cohomol
}
std::vector<std::pair<std::vector<int>, std::vector<int>>> persistence_pairs() {
- auto pairs = persistent_cohomology::Persistent_cohomology<FilteredComplex,
- persistent_cohomology::Field_Zp>::get_persistent_pairs();
+ auto pairs = Base::get_persistent_pairs();
std::vector<std::pair<std::vector<int>, std::vector<int>>> persistence_pairs;
persistence_pairs.reserve(pairs.size());