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-rw-r--r--src/Gudhi_stat/example/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_distance_from_diagonal.cpp79
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diff --git a/src/Gudhi_stat/example/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_distance_from_diagonal.cpp b/src/Gudhi_stat/example/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_distance_from_diagonal.cpp
deleted file mode 100644
index d7f4fbdd..00000000
--- a/src/Gudhi_stat/example/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_distance_from_diagonal.cpp
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@@ -1,79 +0,0 @@
-/* This file is part of the Gudhi Library. The Gudhi library
- * (Geometric Understanding in Higher Dimensions) is a generic C++
- * library for computational topology.
- *
- * Author(s): Pawel Dlotko
- *
- * Copyright (C) 2015 INRIA Sophia-Saclay (France)
- *
- * This program is free software: you can redistribute it and/or modify
- * it under the terms of the GNU General Public License as published by
- * the Free Software Foundation, either version 3 of the License, or
- * (at your option) any later version.
- *
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- * GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License
- * along with this program. If not, see <http://www.gnu.org/licenses/>.
- */
-
-
-
-#include <gudhi/abstract_classes/Abs_Topological_data.h>
-#include <gudhi/concretizations/Persistence_heat_maps.h>
-
-
-
-using namespace Gudhi;
-using namespace Gudhi::Gudhi_stat;
-
-#include <iostream>
-#include <sstream>
-
-
-
-int main( int argc , char** argv )
-{
- std::cout << "This program creates persistence heat map of diagrams provided as an input. The Gaussian kernels are weighted by the distance of a center from the diagonal.\n";
- std::cout << "The first parameter of a program is an integer, a size of a grid.\n";
- std::cout << "The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 \n";
- std::cerr << "The fourth parameter is an integer, the standard deviation of a gaussian kernel expressed in a number of pixels \n";
- std::cout << "The remaining parameters are the names of files with persistence diagrams. \n";
-
- if ( argc < 5 )
- {
- std::cout << "Wrong parameter list, the program will now terminate \n";
- return 1;
- }
-
- size_t size_of_grid = (size_t)atoi( argv[1] );
- double min_ = atof( argv[2] );
- double max_ = atof( argv[3] );
- size_t stdiv = atof( argv[4] );
-
- std::vector< const char* > filenames;
- for ( int i = 5 ; i < argc ; ++i )
- {
- filenames.push_back( argv[i] );
- }
-
-
-
- std::cout << "Creating persistence heat maps...\n";
- std::vector< std::vector<double> > filter = create_Gaussian_filter(stdiv,1);
-
- for ( size_t i = 0 ; i != filenames.size() ; ++i )
- {
- std::cout << "Creating a heat map based on a file : " << filenames[i] << std::endl;
- Persistence_heat_maps l( filenames[i] , filter, distance_from_diagonal, false , size_of_grid , min_ , max_ );
-
- std::stringstream ss;
- ss << filenames[i] << ".mps";
- l.print_to_file( ss.str().c_str() );
- }
- std::cout << "Done \n";
- return 0;
-}