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Diffstat (limited to 'src/Gudhi_stat/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal.cpp')
-rw-r--r--src/Gudhi_stat/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal.cpp18
1 files changed, 13 insertions, 5 deletions
diff --git a/src/Gudhi_stat/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal.cpp b/src/Gudhi_stat/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal.cpp
index f62615f5..27846a99 100644
--- a/src/Gudhi_stat/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal.cpp
+++ b/src/Gudhi_stat/utilities/persistence_heat_maps/create_persistence_heat_maps_weighted_by_squared_distance_from_diagonal.cpp
@@ -39,8 +39,11 @@ int main( int argc , char** argv )
std::cout << "The first parameter of a program is an integer, a size of a grid.\n";
std::cout << "The second and third parameters are min and max of the grid. If you want those numbers to be computed based on the data, set them both to -1 \n";
std::cerr << "The fourth parameter is an integer, the standard deviation of a gaussian kernel expressed in a number of pixels \n";
+ std::cout << "The fifth parameter of this program is a dimension of persistence that will be used in creation of the persistence heat maps.";
+ std::cout << "If our input files contain persistence pairs of various dimension, as a fifth parameter of the procedure please provide the dimension of persistence you want to use.";
+ std::cout << "If in your file there are only birth-death pairs of the same dimension, set the first parameter to -1." << std::endl;
std::cout << "The remaining parameters are the names of files with persistence diagrams. \n";
-
+
if ( argc < 5 )
{
std::cout << "Wrong parameter list, the program will now terminate \n";
@@ -51,14 +54,19 @@ int main( int argc , char** argv )
double min_ = atof( argv[2] );
double max_ = atof( argv[3] );
size_t stdiv = atof( argv[4] );
+
+ unsigned dimension = std::numeric_limits<unsigned>::max();
+ int dim = atoi( argv[5] );
+ if ( (dim != -1) && (dim >= 0) )
+ {
+ dimension = (unsigned)dim;
+ }
std::vector< const char* > filenames;
- for ( int i = 5 ; i < argc ; ++i )
+ for ( int i = 6 ; i < argc ; ++i )
{
filenames.push_back( argv[i] );
}
-
-
std::cout << "Creating persistence heat maps...\n";
std::vector< std::vector<double> > filter = create_Gaussian_filter(stdiv,1);
@@ -66,7 +74,7 @@ int main( int argc , char** argv )
for ( size_t i = 0 ; i != filenames.size() ; ++i )
{
std::cout << "Creating a heat map based on a file : " << filenames[i] << std::endl;
- Persistence_heat_maps<squared_distance_from_diagonal_scaling> l( filenames[i] , filter, false , size_of_grid , min_ , max_ );
+ Persistence_heat_maps<squared_distance_from_diagonal_scaling> l( filenames[i] , filter, false , size_of_grid , min_ , max_ , dimension );
std::stringstream ss;
ss << filenames[i] << ".mps";