4 files changed, 32 insertions, 39 deletions

diff --git a/src/Simplex_tree/doc/Intro_simplex_tree.h b/src/Simplex_tree/doc/Intro_simplex_tree.h
index 940dd694..f5b72ff6 100644
--- a/src/Simplex_tree/doc/Intro_simplex_tree.h
+++ b/src/Simplex_tree/doc/Intro_simplex_tree.h
@@ -32,7 +32,7 @@ namespace Gudhi {
  * \author    Clément Maria
  *
  * A simplicial complex \f$\mathbf{K}\f$ on a set of vertices \f$V = \{1, \cdots ,|V|\}\f$ is a collection of
- * implices \f$\{\sigma\}\f$, \f$\sigma \subseteq V\f$ such that
+ * simplices \f$\{\sigma\}\f$, \f$\sigma \subseteq V\f$ such that
  * \f$\tau \subseteq \sigma \in \mathbf{K} \rightarrow \tau \in \mathbf{K}\f$. The dimension \f$n=|\sigma|-1\f$ of
  * \f$\sigma\f$ is its number of elements minus \f$1\f$.
  *
diff --git a/src/Simplex_tree/example/CMakeLists.txt b/src/Simplex_tree/example/CMakeLists.txt
index e5285591..d05bb187 100644
--- a/src/Simplex_tree/example/CMakeLists.txt
+++ b/src/Simplex_tree/example/CMakeLists.txt
@@ -1,33 +1,38 @@
 cmake_minimum_required(VERSION 2.6)
 project(Simplex_tree_examples)
 
-add_executable ( simplex_tree_from_cliques_of_graph simplex_tree_from_cliques_of_graph.cpp )
+add_executable ( Simplex_tree_example_from_cliques_of_graph simplex_tree_from_cliques_of_graph.cpp )
 if (TBB_FOUND)
-  target_link_libraries(simplex_tree_from_cliques_of_graph ${TBB_LIBRARIES})
+  target_link_libraries(Simplex_tree_example_from_cliques_of_graph ${TBB_LIBRARIES})
 endif()
-add_test(simplex_tree_from_cliques_of_graph_2 ${CMAKE_CURRENT_BINARY_DIR}/simplex_tree_from_cliques_of_graph
-         ${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/Klein_bottle_complex.fsc 2)
-add_test(simplex_tree_from_cliques_of_graph_3 ${CMAKE_CURRENT_BINARY_DIR}/simplex_tree_from_cliques_of_graph
-         ${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/Klein_bottle_complex.fsc 3)
+add_test(NAME Simplex_tree_example_from_cliques_of_graph_2 COMMAND $<TARGET_FILE:Simplex_tree_example_from_cliques_of_graph>
+    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/Klein_bottle_complex.fsc" "2")
+add_test(NAME Simplex_tree_example_from_cliques_of_graph_3 COMMAND $<TARGET_FILE:Simplex_tree_example_from_cliques_of_graph>
+    "${CMAKE_SOURCE_DIR}/data/filtered_simplicial_complex/Klein_bottle_complex.fsc" "3")
 
-add_executable ( simple_simplex_tree simple_simplex_tree.cpp )
+add_executable ( Simplex_tree_example_simple_simplex_tree simple_simplex_tree.cpp )
 if (TBB_FOUND)
-  target_link_libraries(simple_simplex_tree ${TBB_LIBRARIES})
+  target_link_libraries(Simplex_tree_example_simple_simplex_tree ${TBB_LIBRARIES})
 endif()
-add_test(simple_simplex_tree ${CMAKE_CURRENT_BINARY_DIR}/simple_simplex_tree)
+add_test(NAME Simplex_tree_example_simple_simplex_tree COMMAND $<TARGET_FILE:Simplex_tree_example_simple_simplex_tree>)
 
-add_executable ( mini_simplex_tree mini_simplex_tree.cpp )
-add_test(mini_simplex_tree ${CMAKE_CURRENT_BINARY_DIR}/mini_simplex_tree)
+add_executable ( Simplex_tree_example_mini_simplex_tree mini_simplex_tree.cpp )
+add_test(NAME Simplex_tree_example_mini_simplex_tree COMMAND $<TARGET_FILE:Simplex_tree_example_mini_simplex_tree>)
 
+install(TARGETS Simplex_tree_example_from_cliques_of_graph DESTINATION bin)
+install(TARGETS Simplex_tree_example_simple_simplex_tree DESTINATION bin)
+install(TARGETS Simplex_tree_example_mini_simplex_tree DESTINATION bin)
 
 # An example with Simplex-tree using CGAL alpha_shapes_3
 if(GMP_FOUND AND CGAL_FOUND)
-  add_executable ( alpha_shapes_3_simplex_tree_from_off_file example_alpha_shapes_3_simplex_tree_from_off_file.cpp )
-  target_link_libraries(alpha_shapes_3_simplex_tree_from_off_file ${GMP_LIBRARIES} ${CGAL_LIBRARY} ${Boost_SYSTEM_LIBRARY})
+  add_executable ( Simplex_tree_example_alpha_shapes_3_from_off example_alpha_shapes_3_simplex_tree_from_off_file.cpp )
+  target_link_libraries(Simplex_tree_example_alpha_shapes_3_from_off ${GMP_LIBRARIES} ${CGAL_LIBRARY} ${Boost_SYSTEM_LIBRARY})
   if (TBB_FOUND)
-    target_link_libraries(alpha_shapes_3_simplex_tree_from_off_file ${TBB_LIBRARIES})
+    target_link_libraries(Simplex_tree_example_alpha_shapes_3_from_off ${TBB_LIBRARIES})
   endif()
-  add_test(alpha_shapes_3_simplex_tree_from_off_file
-           ${CMAKE_CURRENT_BINARY_DIR}/alpha_shapes_3_simplex_tree_from_off_file
-           ${CMAKE_SOURCE_DIR}/data/points/bunny_5000.off)
+  add_test(NAME Simplex_tree_example_alpha_shapes_3_from_off COMMAND $<TARGET_FILE:Simplex_tree_example_alpha_shapes_3_from_off>
+      "${CMAKE_SOURCE_DIR}/data/points/bunny_5000.off")
+
+  install(TARGETS Simplex_tree_example_alpha_shapes_3_from_off DESTINATION bin)
+
 endif()
diff --git a/src/Simplex_tree/example/README b/src/Simplex_tree/example/README
index e37af790..a9498173 100644
--- a/src/Simplex_tree/example/README
+++ b/src/Simplex_tree/example/README
@@ -10,7 +10,7 @@ Example of use :
 
 *** Simple simplex tree construction
 
-./simple_simplex_tree
+./Simplex_tree_example_simple_simplex_tree
 
 ********************************************************************
 EXAMPLE OF SIMPLE INSERTION
@@ -52,7 +52,7 @@ EXAMPLE OF SIMPLE INSERTION
 
 *** Simplex tree construction with Z/2Z coefficients on weighted graph Klein bottle file:
 
-./simplex_tree_from_cliques_of_graph ../../../data/points/Klein_bottle_complex.txt 2
+./Simplex_tree_example_from_cliques_of_graph ../../../data/points/Klein_bottle_complex.txt 2
 Insert the 1-skeleton in the simplex tree in 0 s. 
 Expand the simplex tree in 0 s. 
 Information of the Simplex Tree: 
@@ -60,7 +60,7 @@ Information of the Simplex Tree:
 
 with Z/3Z coefficients:
 
-./simplex_tree_from_cliques_of_graph ../../../data/points/Klein_bottle_complex.txt 3
+./Simplex_tree_example_from_cliques_of_graph ../../../data/points/Klein_bottle_complex.txt 3
 
 Insert the 1-skeleton in the simplex tree in 0 s.
 Expand the simplex tree in 0 s.
@@ -70,4 +70,4 @@ Information of the Simplex Tree:
 *** Simplex_tree computed and displayed from a 3D alpha complex:
     [ Requires CGAL, GMP and GMPXX to be installed]
 
-./simplex_tree_from_alpha_shapes_3 ../../../data/points/bunny_5000
+./Simplex_tree_example_alpha_shapes_3_from_off ../../../data/points/bunny_5000
diff --git a/src/Simplex_tree/test/CMakeLists.txt b/src/Simplex_tree/test/CMakeLists.txt
index e95d0782..17b0f2c2 100644
--- a/src/Simplex_tree/test/CMakeLists.txt
+++ b/src/Simplex_tree/test/CMakeLists.txt
@@ -1,27 +1,15 @@
 cmake_minimum_required(VERSION 2.6)
 project(Simplex_tree_tests)
 
-if (GCOVR_PATH)
-  # for gcovr to make coverage reports - Corbera Jenkins plugin
-  set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -fprofile-arcs -ftest-coverage")
-endif()
-if (GPROF_PATH)
-  # for gprof to make coverage reports - Jenkins
-  set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -pg")
-endif()
+include(GUDHI_test_coverage)
 
-add_executable ( SimplexTreeUT simplex_tree_unit_test.cpp )
-target_link_libraries(SimplexTreeUT ${Boost_SYSTEM_LIBRARY} ${Boost_UNIT_TEST_FRAMEWORK_LIBRARY})
+add_executable ( Simplex_tree_test_unit simplex_tree_unit_test.cpp )
+target_link_libraries(Simplex_tree_test_unit ${Boost_SYSTEM_LIBRARY} ${Boost_UNIT_TEST_FRAMEWORK_LIBRARY})
 if (TBB_FOUND)
-  target_link_libraries(SimplexTreeUT ${TBB_LIBRARIES})
+  target_link_libraries(Simplex_tree_test_unit ${TBB_LIBRARIES})
 endif()
 
 # Do not forget to copy test files in current binary dir
 file(COPY "simplex_tree_for_unit_test.txt" DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
 
-# Unitary tests
-add_test(NAME SimplexTreeUT
-  COMMAND ${CMAKE_CURRENT_BINARY_DIR}/SimplexTreeUT 
-    # XML format for Jenkins xUnit plugin 
-    --log_format=XML --log_sink=${CMAKE_SOURCE_DIR}/SimplexTreeUT.xml --log_level=test_suite --report_level=no)
-
+gudhi_add_coverage_test(Simplex_tree_test_unit)