diff options
Diffstat (limited to 'src/cython/example/cubical_complex_from_perseus_file_example.py')
-rwxr-xr-x | src/cython/example/cubical_complex_from_perseus_file_example.py | 56 |
1 files changed, 56 insertions, 0 deletions
diff --git a/src/cython/example/cubical_complex_from_perseus_file_example.py b/src/cython/example/cubical_complex_from_perseus_file_example.py new file mode 100755 index 00000000..23f7ece6 --- /dev/null +++ b/src/cython/example/cubical_complex_from_perseus_file_example.py @@ -0,0 +1,56 @@ +#!/usr/bin/env python + +import gudhi +import numpy +import argparse +import operator +import os + +"""This file is part of the Gudhi Library. The Gudhi library + (Geometric Understanding in Higher Dimensions) is a generic C++ + library for computational topology. + + Author(s): Vincent Rouvreau + + Copyright (C) 2016 INRIA + + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program. If not, see <http://www.gnu.org/licenses/>. +""" + +__author__ = "Vincent Rouvreau" +__copyright__ = "Copyright (C) 2016 INRIA" +__license__ = "GPL v3" + +parser = argparse.ArgumentParser(description='Cubical complex from a perseus' + 'file style name.', + epilog='Example: ' + './cubical_complex_from_perseus_file_example.py' + ' -f ../data/bitmap/CubicalTwoSphere.txt') + +parser.add_argument("-f", "--file", type=str, required=True) + +args = parser.parse_args() + +if os.access(args.file, os.R_OK): + print("#####################################################################") + print("CubicalComplex creation") + cubical_complex = gudhi.CubicalComplex(perseus_file=args.file) + + print("persistence(homology_coeff_field=2, min_persistence=0)=") + print(cubical_complex.persistence(homology_coeff_field=2, min_persistence=0)) + + print("betti_numbers()=") + print(cubical_complex.betti_numbers()) +else: + print(args.file, "is unreachable") |