diff options
Diffstat (limited to 'src/python/doc')
| -rw-r--r-- | src/python/doc/rips_complex_ref.rst | 13 | ||||
| -rw-r--r-- | src/python/doc/rips_complex_sum.inc | 3 | ||||
| -rw-r--r-- | src/python/doc/rips_complex_user.rst | 20 |
3 files changed, 36 insertions, 0 deletions
diff --git a/src/python/doc/rips_complex_ref.rst b/src/python/doc/rips_complex_ref.rst index 5f3e46c1..f781fd92 100644 --- a/src/python/doc/rips_complex_ref.rst +++ b/src/python/doc/rips_complex_ref.rst @@ -25,3 +25,16 @@ Weighted Rips complex reference manual :show-inheritance: .. automethod:: gudhi.weighted_rips_complex.WeightedRipsComplex.__init__ + +.. _dtm-rips-complex-reference-manual: + +================================= +DTM Rips complex reference manual +================================= + +.. autoclass:: gudhi.dtm_rips_complex.DtmRipsComplex + :members: + :undoc-members: + :show-inheritance: + + .. automethod:: gudhi.dtm_rips_complex.DtmRipsComplex.__init__
\ No newline at end of file diff --git a/src/python/doc/rips_complex_sum.inc b/src/python/doc/rips_complex_sum.inc index f7580714..9cd8074b 100644 --- a/src/python/doc/rips_complex_sum.inc +++ b/src/python/doc/rips_complex_sum.inc @@ -14,6 +14,9 @@ | | | | | | Weighted Rips complex constructs a simplicial complex from a distance | | | | matrix and weights on vertices. | | + | | | | + | | DTM Rips complex builds a simplicial complex from a point set or | | + | | a distance matrix. | | +----------------------------------------------------------------+------------------------------------------------------------------------+----------------------------------------------------------------------+ | * :doc:`rips_complex_user` | * :doc:`rips_complex_ref` | +----------------------------------------------------------------+-----------------------------------------------------------------------------------------------------------------------------------------------+ diff --git a/src/python/doc/rips_complex_user.rst b/src/python/doc/rips_complex_user.rst index 819568be..eb2657df 100644 --- a/src/python/doc/rips_complex_user.rst +++ b/src/python/doc/rips_complex_user.rst @@ -398,3 +398,23 @@ The output is: .. testoutput:: [(0, (3.1622776601683795, inf)), (0, (3.1622776601683795, 5.39834563766817)), (0, (3.1622776601683795, 5.39834563766817))] + +DTM Rips Complex +---------------- + +`DtmdRipsComplex <rips_complex_ref.html#dtm-rips-complex-reference-manual>`_ builds a simplicial complex from a point set or a full distence matrix (in the form of ndarray), as described in the above example. + +.. testcode:: + + import numpy as np + from dtm_rips_complex import DtmRipsComplex + pts = np.array([[2.0, 2.0], [0.0, 1.0], [3.0, 4.0]]) + dtm_rips = DtmRipsComplex(points=pts, k=2) + st = dtm_rips.create_simplex_tree(max_dimension=2) + print(st.persistence()) + +The output is: + +.. testoutput:: + + [(0, (3.1622776601683795, inf)), (0, (3.1622776601683795, 5.39834563766817)), (0, (3.1622776601683795, 5.39834563766817))] |