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2018-03-13Simplex_key clarifications in FilteredComplex concept.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3284 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a42ef2c14a64a769c9a8c8ddc37071ba260b17bf
2018-03-12untestedglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3279 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 327de60f56f1c0baa9dfdcbd4ca86afa43fcc053
2018-03-12git-svn-id: ↵glisse
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3278 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 68262663f0fbeceef2a81929e42799479e7038f8
2018-03-08Web site review after Editorial Boardvrouvrea
Do not need to import gudhi twice in py git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3270 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7d7a4bba27f4cbcad5f8b18cb86587a15e6a8435
2018-03-06Merge of branch offreaderfix_vincentvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3267 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 92edf71d87033c53b3a46fbd86d5d8e4e2f0e1b5
2018-03-06Add offline_header.html for Debian package generation that requires ↵vrouvrea
self-contained documentation. Command for generation : ( cat Doxyfile ; echo "HTML_HEADER = doc/common/offline_header.html" ) | doxygen - git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3266 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7bd88e71f56b8c7929cfc8475dd49ff2b0901b53
2018-03-05Install Miniball with gudhi for Cech to compilevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3265 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 35309d8ef71455028fd4abeeba03ece2b0d0461f
2018-03-05Fix documentationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3264 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: af6241dfe42d988b542224b9dae7364f3f22b6fd
2018-03-05Fix doc and testsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3262 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c76eb981f5960938221aa2498cb87b0707391733
2018-02-22Fix Cech with radius distancevrouvrea
Add a meta generation script for off_file_generator git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3256 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fb13baa124ddc97c0dc61835ab0c72595d666155
2018-02-20Add doc, example renamedvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3254 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 666bacd07c711b89167c87155c21fe88688e2e68
2018-02-20tests and utils fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3253 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5786a8a7e4b16750f29fac99ca61926158542cfd
2018-02-16Compiles. Class documentation is done.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3252 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fdcfe090afddb112dee4c19c7b42432277a7f468
2018-02-16Add Cech complex. Do not compile yet.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3250 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bef87ed8038444685b964175ea65860300917380
2018-02-14Fix copyright issues for Simplex treevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3248 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d13758f0059174863de260efac88b32aef256753
2018-02-14A new branch for Cech complex to fix merge issue of cech_complex branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3245 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 31f2c9572964dad073caa91ace7821cf8e46d89a
2018-02-13Fix Kl.off strange formatvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/offreaderfix_vincent@3244 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1e297c5703ddd59e5b1af6c65a4fbe2a4c318c33
2018-02-13Add documentation tests for example_vector_double_points_off_readervrouvrea
Fix Marc's comments about reader git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/offreaderfix_vincent@3243 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7dfb928c064c1286c1903cb91600ebace7a8fd47
2018-02-13A branch to fix OFF file readervrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/offreaderfix_vincent@3242 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: badda4f7aa6d1528fb90bfed3bfee8f716bd4a60
2018-02-08Fixed comments from Marc and Vincent.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3234 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8b5e08c38cd05512ba8b2824f13a62d35f39bac3
2018-02-08random commit.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3233 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9a3ccdd8a000bd3fd79bab61b35e50bd707cfb29
2018-02-08The file has been removed.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3232 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4e6e6b2c1939506e19bb76a7bb507f869160577b
2018-02-08Commit to remove one file.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3231 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5795ef0322c1ba328e8bee068009a27f18b7224c
2018-02-08pastoglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3230 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b6d3b0a18215b9541b72f2c7097717d5bfb65574
2018-02-05Do like C++ examplevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3217 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cc963c77e30c649e7428afc609bac4ba1f515a37
2018-02-05clang format filesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3216 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 09a40b92cc8e0cc1a08f962de14daed975338d1c
2018-02-02Fix readme and doc issue after mergevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3213 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4fd050a6f686044aa6f6dcc290025e321e0dba1b
2018-02-02Merge last trunk modificatvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3212 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ea6296547b67ad82f5983d4309493e9131da7dd0
2018-02-02Fix after version release of Cover complex and Persistence representation ↵vrouvrea
installations Fix utils download link git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3211 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9596df8b0d0cdc3d8df79aa367a26b34a96d7f5e
2018-02-02yearglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3210 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f962c12e4016ddcd498265c57add0c432212b4dc
2018-02-02epsilonglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3209 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c7cac815867c94821d13d8dd972e6505c43b04ba
2018-02-01git-svn-id: ↵glisse
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3208 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2e0fd8691e04dd1088673910258017802370d265
2018-02-01Move sparse example outside of the "distance" section.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3207 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cca8dee4bf43082286fc9ce1eae5d366c17a333f
2018-02-01git-svn-id: ↵glisse
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3206 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8b4c9b0d6054aa75bd39113d246e43ee051d0658
2018-02-01Add myself to how-to-cite.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3205 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 160430d4cc3e910870e8b727c8b54c930fa0363f
2018-02-01Avoid line breaks between \cite and key.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3204 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 292a7f7d5cbbe6c4c79fa2a16416fa6e3983b9fd
2018-02-01Really remove README, merge didn't dare.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3202 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7b05c5e75821d6a1b0759db13d326a6e142cc01b
2018-02-01Merge from trunk.glisse
hand-merge README that moved to *.md. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3201 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f1922a265c79937e507bbb963875d21fae88069e
2018-02-01typo in CMakeLists.txt + minor reformulation in doc.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3200 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: de115e83e56358fd3d283b802f16a2cc4f6db4f2
2018-01-31testglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3196 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4fbf12d3a2adc56ee85a13fc35571de3963fee70
2018-01-31Add example.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3195 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b8ded704563c6794c098f9b80b1a5e0200e84694
2018-01-31Modify header (cpp and python) to fit with the new website sectionsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3192 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1dc2f0745020db4a27649c55dc1d01397b0a403c
2018-01-31For official GUDHI versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3190 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f3790f950fc43c2909e9ff88b19753a622b506cc
2018-01-30Fix after web reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3189 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fd42bab9b27a3c086adeaf75068c83a911ede000
2018-01-30Double all filtration values.glisse
It was using the Cech convention, not the Rips, so the Rips approximation was not close to the Rips, which is likely to confuse users. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3188 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7b948c956f39dc75931cb00a64516d08ff42e435
2018-01-30Compile and doc utilityglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3187 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b9d1ff7172a9012dcca747c97b9367dc5a78800f
2018-01-30Copy test files in build directory for not to pollute sourcesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3185 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4926f0a4e3c02ce77bdbf5847d421b6152a24a65
2018-01-30Fix --v to -v for Cover complexvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3182 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 46e36af1a3e9aae8f1b12d2ee7fc749eb531f505
2018-01-29Ignore md files for Doxygenvrouvrea
Fix relative path issue git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3179 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c8f88a757fdf681327f1cef9feadf7bf8d12da83
2018-01-29Code review : with C++11 fstream constructor from std::string is availablevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3178 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 31485d70d2d4a475b70d0c07859084b36139b56f