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2016-08-25Add a comment on MiniSTOption Simplex_key type definition about the maximum ↵vrouvrea
to be reached git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1456 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 476838c17d5f6e8745661ee0a67295ce65828f43
2016-08-25Modify the comment about uint_8 -> max is 255vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1455 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6ca626c7d0f4a690587946bf7b9e4d31c8effc23
2016-08-25Modify SimpleyKey, SimplexTreeOptions concept and SimplexTree documentation ↵vrouvrea
about Simplex_key type (can be signed or unsigned). git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1454 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 562aadf6d7491ea7f7144a3394dc78bdabc9e9f1
2016-08-25Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1453 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fe9826c9e59a9252b51a5fa204d3e87e087281d8
2016-08-22Clarify installation documentation by separating in a section optional cotsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1446 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5c5a0544148248f16f03c888b2e8598bc2076a9e
2016-08-05bad tag termination for doxygenvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1421 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7665d06c502a1ed93d87d0393e630083e34bc846
2016-08-05Fix the 3 billions of simplices limitvrouvrea
Add some comment and documentation about the new limit (4 billions) Rephrase third party library installation documentation git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1420 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 95b20677e455b61578da74aabbd3764b4a27816d
2016-08-05With the good include cstdvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1419 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 864b9995ec8675e1578bccf81126959a4a5a22c4
2016-08-05Modify plain_homology to show a Simplex_key type modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1418 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9d9c99b8d8acd8a6fdbfe09601ffe6826ca04857
2016-08-05A branch to fix the 3 billions of simplices bugvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/3billions_simplices_fix@1416 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0718c287f3b538e56832bad09016bed86e643e21
2016-08-04Make GUDHI Cmake less verbose on CGAL package findingvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1415 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2eebce43b0f75ab1cef3a2fe6f2c1bd0b38672a9
2016-07-01Merge of branch eigen3_cmake_factorizationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1379 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d59540faacaa815127c5f42e4aec2bdb5b3caf92
2016-07-01Eigen3 find_package factorizationvrouvrea
CGAL find package in root CMakeLists.txt for Witness complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/eigen3_cmake_factorization@1377 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 32137f7687837c63ecfab3a2d11114b27873a1f2
2016-07-01Eigen3 CMake factorizationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/eigen3_cmake_factorization@1376 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f4da420a6217729fd68f4a883e5c13cee9e53c75
2016-07-01Merge of fix_naming branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1373 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cdd9722e1d58fca13de0f9a9cf0404eb3a22d98d
2016-06-24Bug fix in Gudhi 1.3.0 documentation - Alpha_complex_from_off.cpp and ↵vrouvrea
Alpha_complex_from_points.cpp requires CGAL >= 4.7 git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1346 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e6f0966710d6b07f629490d4b6068d087777488f
2016-06-16Merge FindTBB patch for cmake.vrouvrea
GMP and GMPXX are required only for multi field persistence. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1307 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 56a66e166a07b9eb22ec0d8d05ec66bb5162da5b
2016-06-16Try with 1307 points on a torevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tbb_msvc2015@1306 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 82c15cf0810c287c1d8728c13e7fcc1e75f98af6
2016-06-16Make a simplier test for Contraction as it is too long under Windowsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tbb_msvc2015@1305 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8269c97d1be121be164afe0c8720863541b5799e
2016-06-16Remove GMP and GMPXX required for all persistence examples. Only for ↵vrouvrea
Multi-field. Update doc. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tbb_msvc2015@1303 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5ade88a9525f04ac45e2ddd65881da1771954ef6
2016-06-16gmpxx is required only for Multi-field persistence examplesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tbb_msvc2015@1302 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 567bf69e3efba23f065d296c2b3d69578c377be3
2016-06-16Fix find TBB package for msvc 2015vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tbb_msvc2015@1301 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a76105ff52729d8170eb88f5a5cbbce06b65b0ad
2016-06-16Merge get_persistence code review fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1300 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 47937842d6d42b702c5b67d0002f27e74445b645
2016-06-16Fix after code reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1299 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2c58cbcd94f72930f8516121f47cace95a84511c
2016-06-16Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1298 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bd50f9840b3ef3b3ef7593e81cbd7d6d22b845e3
2016-06-16A branch to fix tbb with MSVC 2015vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/tbb_msvc2015@1297 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5282c77fe12adff4be5c779aba6c4a21b9ec5d09
2016-06-14data points generator to follow convention namingvrouvrea
Alpha_complex instead of Alpha_shape git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1278 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 680d599dce4b87a570083ac16c6574166d7af47d
2016-06-10Rename namespaces according to conventioncjamin
+ Missing Boost_THREAD_LIBRARY + Useless typename + Use TBB_LIBRARIES git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1274 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5c02ec481b62ef52b40d849e76e3d333e2ca4e7c
2016-06-10Useless typenamecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1271 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dcc10421c0e2ce26abbfa93176c62d6c834bb5d3
2016-06-10Missing link with Boost Systemcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1270 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 70e3dfb20af1a0b4f048f56fff0c85dbbde3f530
2016-06-10Use TBB_LIBRARIES instead of TBB_RELEASE_LIBRARY + missing boost dependencycjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1269 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d39ecf562678c53f960467e7cb14eeaff4b938c4
2016-06-08periodic_alpha_complex_3d_persistence modification for is_cuboid_3 to be ↵vrouvrea
customized through a file. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1261 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9862a35dcdfc0dbf0eff01375ea716f094833127
2016-06-07Rename projects in CMakeLists.txtcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1257 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a51e43d795b0c246d0949c7566aa57d3e15925c7
2016-06-07Replace content by a link to the wikicjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1256 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 15a35a7aaeb71f3e137508acce7cd4ff2a0505dc
2016-06-07git-svn-id: ↵cjamin
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/fix_naming@1255 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b5df5fa8a429d3bf1d0290d7b98c0b0618c875ed
2016-05-30get_persistece branch mergevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1222 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bd541b18e29cf7b21524e526e3aefcb363dbaa2b
2016-05-30Missing documentation for parameters.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1220 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 190cfccdca4d4fd15066ad04885d5dc19428d59c
2016-05-30cpplint fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1219 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 81a6208f769c5237d4f81bc97fc1f3d581e733be
2016-05-26Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1214 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1e2a34cf76b6a90a7b640167bb511c2d0125584a
2016-05-26Add doc, examples and unitary testsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1213 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dc7980ef3f1baef17f2e42770da146d6c961e672
2016-05-26Betti number fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1207 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5dacf1565eee2fe83781b0bdfb05898ffa36fe66
2016-05-24get_persistence and Betti numbersvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1190 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6da18e680111a9a1ad7753779a94a1e8ce49702c
2016-05-24Add Aurélien Alvarez's generatorcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1189 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5fe81e09f9f5efe8ea50ac34d9c012c70283a3e6
2016-05-23auto-props only applies to new files, manually set eol-style on old files.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1188 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4aa016adc98fdeaab47ad98f0e5d7e3491d092d0
2016-05-19Seperate doc from code in Persistent_cohomology module.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1184 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 90b406b11cfa6356243bb4e881c8c7db06f14d6e
2016-05-19A branch to develop a persistence gettervrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/get_persistence@1183 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d394e3e8c32cc3093f55da01ed2459175dad6dec
2016-05-10Clock.h requires Boost.Date_timecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1159 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 536869c84e7ced010376bc7c8a7d9608764e7247
2016-05-10Missing "include(${TBB_USE_FILE})"cjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1158 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 61e131f64d4abcf238c24da563fe58703e450346
2016-04-16Use svn:auto-props so EOL should be right on any platform.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1137 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5c3394e504b79e38f6fce56450a64c73b7545884
2016-04-16off file shouldn't be executableglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1136 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e3b902f56f2bddcc363e6abd2b39533bf36c8a6d