summaryrefslogtreecommitdiff
AgeCommit message (Collapse)Author
2018-02-01git-svn-id: ↵glisse
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3206 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8b4c9b0d6054aa75bd39113d246e43ee051d0658
2018-02-01Add myself to how-to-cite.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3205 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 160430d4cc3e910870e8b727c8b54c930fa0363f
2018-02-01Avoid line breaks between \cite and key.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3204 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 292a7f7d5cbbe6c4c79fa2a16416fa6e3983b9fd
2018-02-01Really remove README, merge didn't dare.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3202 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7b05c5e75821d6a1b0759db13d326a6e142cc01b
2018-02-01Merge from trunk.glisse
hand-merge README that moved to *.md. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3201 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f1922a265c79937e507bbb963875d21fae88069e
2018-02-01typo in CMakeLists.txt + minor reformulation in doc.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3200 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: de115e83e56358fd3d283b802f16a2cc4f6db4f2
2018-01-31testglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3196 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4fbf12d3a2adc56ee85a13fc35571de3963fee70
2018-01-31Add example.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3195 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b8ded704563c6794c098f9b80b1a5e0200e84694
2018-01-31Modify header (cpp and python) to fit with the new website sectionsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3192 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1dc2f0745020db4a27649c55dc1d01397b0a403c
2018-01-31For official GUDHI versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3190 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f3790f950fc43c2909e9ff88b19753a622b506cc
2018-01-30Fix after web reviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3189 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fd42bab9b27a3c086adeaf75068c83a911ede000
2018-01-30Double all filtration values.glisse
It was using the Cech convention, not the Rips, so the Rips approximation was not close to the Rips, which is likely to confuse users. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3188 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7b948c956f39dc75931cb00a64516d08ff42e435
2018-01-30Compile and doc utilityglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3187 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b9d1ff7172a9012dcca747c97b9367dc5a78800f
2018-01-30Copy test files in build directory for not to pollute sourcesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3185 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4926f0a4e3c02ce77bdbf5847d421b6152a24a65
2018-01-30Fix --v to -v for Cover complexvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3182 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 46e36af1a3e9aae8f1b12d2ee7fc749eb531f505
2018-01-29Ignore md files for Doxygenvrouvrea
Fix relative path issue git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3179 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c8f88a757fdf681327f1cef9feadf7bf8d12da83
2018-01-29Code review : with C++11 fstream constructor from std::string is availablevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3178 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 31485d70d2d4a475b70d0c07859084b36139b56f
2018-01-29Rename README files for web site generation conformityvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3177 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 632b264790c30accb42e731c4a4f6744a2f7ba11
2018-01-29Fix doc issue for utilities part on the web sitevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3176 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3bafd9e13a5646ca93023144705d3ac7ed7c9b3a
2018-01-29Using std::string instead of char array for file names (overflow detected by ↵vrouvrea
fortify) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3171 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b590989d278e00aec79d6a7bc2b72088b5cb0e57
2018-01-26Add doc Copyright for Python partvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3168 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fccabadc27b805caecaab99517df80fab1113d73
2018-01-26Move documentation Copyright in footervrouvrea
Removed from each module git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3167 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7595f2d18cdc3773bbd96fa9fed414876ff9fdc7
2018-01-26Seperate installation and examples from main pagevrouvrea
Move cover complex utilities from examples GIC.cpp example was not compiled, nor tested. It is removed. Persistence representation : no need to link with Boost_SYSTEM git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3164 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cf2bfa6c6de2ed359aaa165b9f80bca7e06defb1
2018-01-26Bug in Persistent_cohomology: it computes H_1 for a 1-complex, while it does ↵glisse
not compute H_2 for a 2-complex. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3163 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0c027aa0c8f14e563ba1e707419b9dee1b84a610
2018-01-26doc for epsilonglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3162 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 02ec0665d288e7e68959aa188cd291924a7d1c8f
2018-01-25Small changes suggested by Marcmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3157 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 011f3638ca7b0c51cdd0d0983bb9e2f6fd256ad9
2018-01-25Code review : fix camel case for types and use of std::log instead of logvrouvrea
Add CGAL dependency for Nerve_GIC (link to bottleneck) Add persistence representation in bibtex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3155 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8a45497b3d1f34a5c4a1c7856113c6b7680a12a2
2018-01-22Fix cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3149 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e1cc797f8c24015168a1f84430666e8a156ababa
2018-01-22Fix some cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3148 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 34a01d0b7d9b59e72fd14e7616a09dde50e1dbd1
2018-01-22Merge branch Nerve_GIC - using boost Dijkstra instead of Simplex treevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3147 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 82ab3eca5c907cbbb716a7ef47cc84b0a0d1000d
2018-01-22Some general doc.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3146 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8105c997b5541d0f3c8640e985de5d6810ab6be9
2018-01-17Fix Qt5 issue for condavrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3142 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fba226ce40c3b20cd53bc1c4a199d309180faa1f
2018-01-16Some references for sparse Rips.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3138 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 56151faea78697afd3da72084f186d25b9252552
2018-01-16Initial commit of sparse Rips, based on Rips_complex.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3137 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f0550a0a24a25e8d9ab16535eb4364e8dc4228e6
2018-01-16Merge from trunk. The Simplex_tree fixes are necessary for the sparse Rips.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3136 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c9b99853fe14525c31aceb4765b107c83e45c373
2018-01-16Merge of branch misc-glissevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3135 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7b678c4b6accf796920ca9582fa57e13f5f1f8cb
2018-01-15New branch.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3132 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 17111daa449314ce52d29607e6f0419b516547da
2018-01-11git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3129 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 567185cf3691252c2685c450d65787d824442bb2
2018-01-11git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3125 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4064ad30936118d97d16f84a5288e349f86109b6
2018-01-09git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3122 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e47b68d4c035119352ad433a9efd516aef3a70f5
2018-01-09git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3121 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d7b24f452fd8e75aac61c40f0281dca683d7fa03
2018-01-08Fix std::max Windows issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3120 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9aad5e17fb5b93b9b9054ce093dd54a56ca4b08a
2018-01-08Add include <iterator> for std::distancevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3119 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 92438c70043c4ee0d200b8906400b059d176196f
2018-01-08clang-format filesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3118 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c8371fc65da4f9912b602a4f3a6701661e46580e
2018-01-08Merge of branch persistence_representation_integration_cmake_improvementvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3117 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 673143bd16e06d990aeb104a506cfd71f91a8717
2018-01-08Merge of persistence_representations_fix_reading branch + clang format filesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3116 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0bae116ddc294d46e347d61fecc6e76b1e13f053
2018-01-07reading ug fixed. pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representations_fix_reading@3114 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b1476d1db101bc4c7377d9e5e34445ee6cd7cf9a
2018-01-04bla bla bla.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representations_fix_reading@3113 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 43e8980c219f47a2a00041cc2c5a9d101f4bd68d
2018-01-03git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@3112 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0e3300cbc4d9c1375a7a162d175a982c3145c42b
2018-01-03git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3111 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 54bd749106f2ceacc067f50c672dc43ead99e8ee