summaryrefslogtreecommitdiff
AgeCommit message (Collapse)Author
2018-05-02Add Python Simplex_tree make_filtration_non_decreasing interface and its testsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3409 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6a3af66b3d90c6114886e54c5c34287a13f4b863
2018-04-30git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3408 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6bfd16f3520497204e4bb67e0705ce120af23ec9
2018-04-27Remove show_palette_valuesvrouvrea
Add legend flag to display the legend Set rips threshold to 0.3 for users not to be surprised when playing with threshold git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3406 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 03999711eafb81748a82b5725482a9f0d4307861
2018-04-27persistence_graphical_tools documentation clarificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3405 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5b38ba745e20585c35263e2880b8511299e11129
2018-04-27Code and doc review with IFPEN :vrouvrea
plot_*: c'est quoi ce paramètre alpha ? band_boot: Renommer en 'band', sans référence au bootstrap. Ne pas l'utiliser dans la majorité des exemples / tutos. max_plots: mettre une valeur par défaut, pour éviter qu'on se retrouve trop facilement coincé à attendre 1h qu'il affiche des points. Éventuellement afficher un message indiquant que certains points n'ont pas été affichés et comment changer ça. barcode: trier les barres par date de naissance (le faire tout le temps ou avoir une option et le faire par défaut). git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3404 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cfa775e425fbf12da1758d601ccbd80a2c7d3bc9
2018-04-27Merge Copyright clarificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3402 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c24c2226a76df7a6a95d2531e98850c7c19580e1
2018-04-27Merge copyright_clarification_vincent branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3401 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4aac79bc289d93cd77bf712d7efcc3a893ee652c
2018-04-26Fix Copyrightsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/copyright_clarification_vincent@3400 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff348beedf92656c6913c2a1df983b5804b33988
2018-04-26A branch to clarify copyrights - necessary for Debian packagevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/copyright_clarification_vincent@3399 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7c05904320b8e67549719f1de5c852e8edf324ee
2018-04-25renamed landscape and image code to make them fit in Pawel's denominationmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3398 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c57a2eb71d848df7bd677a8f3fc803b0c87d2d8d
2018-04-25renamed landscape and image code to make them fit in Pawel's denominationmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3397 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ddbd1dc31e12654bf3a9d9aaf67c4dfc482faa03
2018-04-25renamed landscape and image code to make them fit in Pawel's denominationmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3396 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5269a65810a1164cb61bcb34d23046e6a48ec355
2018-04-25persistence_pairs Python versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3393 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5ee633545ca5754b605cdd789ca9720f5936998a
2018-04-24Fix Python tangential complex versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3392 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f0d9e008229a6cd7868f4afd11eaf3c566e81adf
2018-04-23added unitary tests for kernelsmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3391 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d383ed76f3cfd3724449cb7e8c24b895a7322d52
2018-04-23git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3389 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1569e7e9d47af54fe85e736583e53c99f1178439
2018-04-23added weight_functions.hmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3388 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 71f741e7ca2fcacc877d44e4d6b633f283526f2f
2018-04-23git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3387 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3fe2ae4af0c7cadf507fc5148c05dcf664c5e151
2018-04-20git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3386 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 29ea554ecd104927cce84dbc21dab531fc21265c
2018-04-20git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3385 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2a83e62e132ce406986efa1456b5f1bca6b93691
2018-04-12git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3378 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7cd9f2ae7c9da5d525bdb76a00ffac1359a47da7
2018-04-12Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3376 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6d1270a8145be1f57d0a597426b550dd9770249f
2018-04-12Add a CMake option in order to use TBB or not. Default is ONvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3375 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fbe41ee9e7771095e34b6c12adbacddf9484f1b1
2018-04-12A new branch to fix some bugs in GUDHI 2.1.0 Python versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3374 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 30c37e171b1196e670854267be182365d65fd5dd
2018-04-10Doc review : Gudhi::Proximity_graph and Gudhi::Radius_distance must be links ↵vrouvrea
in the doc git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3370 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fc57faf137316ae07e06491482e0756fbacaf479
2018-04-10Doc review : Add explanation when to use Alpha or Cech.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3369 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4b6cf58478a7dbe1825491681507d4304d8f3584
2018-04-10Change tparam doc from Chech_complex_blockervrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3367 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 717baf604d7c639eabed28f4ad5639c4eac15dc1
2018-04-10Code review : Cech_blocker was hardcoding doublevrouvrea
replace point_iterator function in a get_point const function that returns a Point InputPointRange description Cech blocker is now templated with Cech complex, which is no more included. Deep copy of the point cloud on Cech complex ctor git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3365 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 93e3cf3fe61290b88a0714b9e55ad80e01a34f36
2018-04-10Doc review : Separate global definition and a new section algorithm.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3360 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 88289d011e416c3b3d66faffbcaa3e07b910314c
2018-04-09Code review : Rename ForwardPointIterator with InputPointRangevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3358 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6f90e228c4c546b28b9fe610e5f59bbab047cd27
2018-04-09Add an algorithm sectionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3357 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 17324da3ced1ff07a46b1c0d2abe782b5e706279
2018-04-09Doc review : Fix links to Gudhi::Minimal_enclosing_ball_radiusvrouvrea
Improve the doc git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3356 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 886022b4addfe0b0993fbe2675adb527a0f57700
2018-04-09Doc review: Fix main page cech complex explainationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3354 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0871ae5a851c40e880625a08f470277f93476864
2018-04-09Add Miniball file changes for Gudhi requirements inside Miniball.READMEvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cechcomplex_vincent@3353 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 099bc9ed544e5a81a5dc3a8dea3ce93afbfef82b
2018-04-09Fix deprecated CGAL random functionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3352 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dcd5eadc420575b1de91acd80328c6026bef7e0a
2018-04-05Merge last modifications of Nerve_GIC branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3342 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 268968d6b446db88bdaab48bbdb5c91882d4a820
2018-04-04No need to repeat title, automatically done by the websitevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3338 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 51d295377d2b3235e9316f199bf95d3c5aeaeab3
2018-04-04Fix max issue on MacOS clangvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3337 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 89cd68f9abd58a43553d9ca2d54e776374557f26
2018-04-04Merge sparse rips branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3336 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 01dcab006197637ccba9c29f8990375fe05ad7b4
2018-04-03Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-glisse@3335 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 41b78dbadb13e3eca889479c1112814b2b58f679
2018-04-03Modify the correct signature to operator== and !=vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3333 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 936c6abcb75e16cc569368e45e87feaa409e0890
2018-04-03Try to fix operator< for std::sort on CentOSvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3332 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: caaeb02c38a8adc8c09321e534f9b73181450acf
2018-04-03Add explicit operator< to fix sort bugvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3331 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d1a70cdbae311f1376e24d61568471d81b7f0df1
2018-04-03Merge rips_complex_from_correlation_matrix branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3328 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a0d98d884fc06a6528e3362d6ed627cd964f527a
2018-04-03Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3327 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 85b28237989b93fb4b5f8629a7f28bdb51b9a1b1
2018-04-03Add warnings for rips persistence from correlation matrix (points under the ↵vrouvrea
diagonal). Use range instead of vector in write_persistence_intervals_to_stream git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3326 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ea0fdc32c91f1927c5a9f2a3864360895ce8128a
2018-03-30git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3323 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 550a4c3f9050b542203ab53ea7ef5ae1c8032f38
2018-03-29added doc + cythonmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/kernels@3319 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cffc2e28ebf6fae46246c5abaac52b7328adf490
2018-03-29Use add_edge_without_blockers in GudhUI.glisse
When the meaning of add_edge changed, GudhUI was not updated. The old functionality is available as add_edge_without_blockers. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3318 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 58b10f79177736cc99e35fb526e4c987d615ae4c
2018-03-29Use CGAL::NT_converter to convert filtration values.glisse
Alpha_complex may produce something different from what the Simplex_tree expects, convert it explicitly. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3317 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d6c7492bbf48401a9f63f6462c7704e380eff6e1
generated by cgit v1.2.3 (git 2.39.1) at 2024-07-16 09:41:51 +0000