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2017-11-30Typo get_point_cloud retrieves the points, not the triangulation.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2998 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: acc15d17d9ebf9cb3e64c8c66e756cdd8627d137
2017-11-30rename the_simplex_tree which represents one simplexglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2996 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fae071018b07c2a3304d14038b6778da0589bf05
2017-11-30No loop for 2 valuesglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2995 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a0e12ce0db1dfdaf922daa1ed85da4712fd36191
2017-11-30list -> vectorglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2994 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 336af6c51d9b6ca4d60b2caac02a3f53b02ffda5
2017-11-30remove filtration_maxglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2993 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 99113f763adb76266bb2dad206bce539076c3f62
2017-11-30remove dim_maxglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2992 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8d511d55de65a316b2c83a6763c90ef2bc26942f
2017-11-30dead typedefglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2991 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a314bb92443fc49370a7e12da84713eed7985981
2017-11-30map::insert(pair(a,b)) --> map::emplace(a,b)glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2990 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ae232890c6291e2e381b0d76f21b2a66da2cf9f5
2017-11-30Small optimization for neighbor search in bottleneck.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2989 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5f13ee7292f8c43a430ee80d27e549ad0d1e938b
2017-11-30Branch for minor patchesglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@2988 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3fb19e8331355da7d3bb91afef6e8a34c6886c27
2017-11-24Merge ST-doc-simplex branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2953 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6a2e9879d7374ce337b2be7a445d8f4adce1f332
2017-11-22Merge set_dimension_mechanism_precision branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2936 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b308c3c49a541175f4c70e7e28575ac503552514
2017-11-22Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2933 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 35002d0ff4808310af630a0dd7a5697e7c069812
2017-11-22Merge graph_expansion_blocker fix from cech_complex branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2932 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c6397609dbf92cad0fdd6c0fc5365b96657edec9
2017-11-22Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2931 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 44ca09283b600e6af453eb3507bb4ec92b31948b
2017-11-21Merge add_utils_in_gudhi_v2 branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2925 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7e7153337bed2b1641bb80c6c532d07f526f5b10
2017-11-20Merge to resolve svn issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2923 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3bcc7619c82e7c9b91cf68ceab13ae061bf28bbf
2017-11-20Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2922 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9ea024337f05cfc4f9a1d645c6e6ee9aac9700ba
2017-11-20Merge witness documentation correctionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2921 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 893873ebcabe2e9f876590f194d438018e0c83b4
2017-11-20Copy the doc from FilteredComplex::simplex to the Simplex_tree.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST-doc-simplex@2920 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0323c23e4cd46f79439f477475df4273847aafc2
2017-11-20Branch to fix the doc of Simplex_tree::simplex(key)glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST-doc-simplex@2919 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 86bcbd9e8cf28fa9e79901e03a4fb8ae58f963cd
2017-11-20assign_filtration bindingvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2918 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 390839c0f172993f6117746d08c5a22c00778c5f
2017-11-20Add upper_bound_dimension and associated documentation for automatic ↵vrouvrea
dimension set. prune_above_filtration cythonization git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2917 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 12af3c5c2d6012c43d80cc95e1ecc8a2c0df340e
2017-11-17Corrected Strong_witness docskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2911 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7eba082751ee3e97bcf007946fe8be79a60680a4
2017-11-17Added the commented choose_n_farthest_points everywhereskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2909 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9f7a325facf798748c4c08e3815fbbd3d4075b78
2017-11-17Made farthest_points clickableskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2908 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 452e4af3d270f02ce5bfe77309aca4a84772acba
2017-11-17Added a comment to one of the examplesskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2906 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ed2a18c2c6f90c4c9f71f2415f97198473352db7
2017-11-17Modified docskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2905 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2e5b2ab68008719be5835bcad4aa38fbceaf2c9c
2017-11-17Created a branch for correcting the documentation for witness complexskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/wit_doc_corrections@2904 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e49da032662f4b878b684d8931542fc6983cd5f8
2017-11-17Homogenize shebang for Python scripts used as executablesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2903 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 904aff059b880e4e197fd81c46160d53b5794998
2017-11-16Merge branch Nerve_GIC for the Nerve Graph Induced Complex implementationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2902 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d35cef17512459b855ee5305be856511ac0d18b4
2017-11-16cpplint fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@2901 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e3bcc2ee7393216cb37422bc9133bf9649695a82
2017-11-16A new branch to precise set dimesion mechanismvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2900 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 325b3d02bb777df6d6fffed2178a698b045fd8b1
2017-11-16Fix cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@2899 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a9ae3db0198920608159e57b246f19c3d1acb9dc
2017-11-16Apply google code conventions for cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@2898 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2f82ddf869dc95ec33c6cea825ee24cd1a849c4b
2017-11-16Merge last trunk modificationsvrouvrea
Fix copyright issues Add Nerve_GIC as examples git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@2897 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ee046c4c043c7fb76f4b2ad6772229f3a837ae8f
2017-11-16Fix compilationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@2896 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 338feabf060d18464fce006487c190e7dc36fef9
2017-11-16Remove this bad commit from rev. 2873vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2894 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: eb837c2fbeda683375f0b9355ce44953045f1649
2017-11-16Add missing includescjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2890 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9ddda864abff7b9509984dcbc657225ea1c80b1a
2017-11-16Add a script to concatenate utilities/README filesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2889 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1e79ad60b440d1bb2bd2fb5ede8d541e5970d6aa
2017-11-16Merge last trunk modificationsvrouvrea
Fix doxygen warnings git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2888 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b80b28a10495b6f2519b53885b1bf31be85ed7ac
2017-11-16Code review : Homogenize alpha shape examples command linevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2887 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8c692434eb48c525047bc34a6fab7d7c1af64d56
2017-11-15Doccjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2884 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c5e0a65a484a71d8a9fc1fc2b695dd20a367fd0c
2017-11-15Move 2 more examples into utilitiescjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2883 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b9fd71a4833c84640be2a0f792f1eaea5109874d
2017-11-15Add iso-cuboid file formatcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2882 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ad82867ef7523c4a03fdb89054e5bd7b8d40f7da
2017-11-15Fixes according to Marc's reviewcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/add_utils_in_gudhi_v2@2881 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 84870193cb05cabd8c756a3bbc49083e4d739525
2017-11-14Merged trunk in cc_wit for having fun with Pawel's ideaskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2873 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 56c9a7c1528f0b94ab69e5327dabbc602f18036c
2017-11-13Thanks to code coverage, I fugured out some tests were not performed because ↵vrouvrea
of teir same name git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2872 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9c2158b7e0e77ad7ce8812bdfac312f3f7daf992
2017-11-13Merge of branch periodic_cubical_complex_fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2871 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4fa2858384d6a0b3e8fd25703be40f243e2fea5e
2017-11-13User feedback : documentation shall explain the default homology_coeff_field ↵vrouvrea
is set to '11' in Simplex_tree Python bindings. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2870 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3db5b073fce8ca99271d20690e3559c3a0a6557d