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2017-06-08Add modules as CMake options in order to be able to activate/desactivate ↵vrouvrea
compilation git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_modules_for_gudhi@2515 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 53d5e669ad310c9d8d17c7f95f1e07c3bf658d77
2017-06-06Fix typosvrouvrea
remove LateX documentation git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2514 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 221bb6c675a47aca0f7867dde37b9db556f21e60
2017-06-06Make build out of sourcevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2513 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7b6b18858d5e71613c4c15c4c262b4c4b5a6ac8e
2017-06-02Fix install issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/boost_system_no_deprecated_test@2510 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c081183c9876761dace595a09ec04fe220846ed6
2017-06-02Get rid of Boost_system library linkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/boost_system_no_deprecated_test@2509 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 52deba0f2212767b99b801810d356e55417225db
2017-06-02Fix cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2508 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 21df689e8e3b5cdacd33a580c1b3533e34f7f1dc
2017-06-02Fix cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2507 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0e623d7fda81eb22a1572fe6f821697d2265de3b
2017-06-02Fix compilation issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2506 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 22e04a60dc830fc87f18e3cb82410cfd8a7a0d74
2017-06-02use std::fabs. Compilation issue on Fedora25vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2505 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d0e3e91bea107a8f392f1d57462d489df01fb98b
2017-06-02Try to remove boost systemvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/boost_system_no_deprecated_test@2504 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fd12c45af5ebeb72c4b49142abab91b46ce1a9da
2017-06-02Fix cpplint issuesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2503 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f2c5ba756b7cd4115fb97eeb066216b312b4ae2f
2017-06-02Fix some cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2502 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0a6422b0fa27105b9aaba743371da3328d9039be
2017-06-01Doc for "pers" file formatcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2500 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2da948fefffcb1961961e3111c89f400f23b65d3
2017-06-01Use make_function_output_iterator to avoid code duplicationcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2498 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7d9a9d3f72ef4af17f4a9b8263526df69498090c
2017-05-31Test bottleneck_read_file_examplecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2490 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dbbce2ac4862dfdd3c01a619bf68120112ab44d5
2017-05-31Add persistence diagram samplescjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2489 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bcad955589cbfccdb5f887e409df17a07288c9e4
2017-05-31Check if birth <= deathcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2488 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fc7aeca7ca7cd1ec2e9a9263849ec34d4dfa8414
2017-05-31Fix doccjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2487 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7be9a5da2a64835ff7558373e7a754647bc5b663
2017-05-31Typocjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2486 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dcc6134d95dea816a3c54a2a796535f384ccfc54
2017-05-31Fix doc and shorten codecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2485 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 97dcd51c0dc9cef00a655e5e0ad078de752eabe8
2017-05-31A branch to test boost_system_no_deprecatedvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/boost_system_no_deprecated_test@2483 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bb3ac8fa89506500e0ef55266b4b358dd444dc56
2017-05-31Merge from trunkcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2482 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5487cc3f399d42f736ec008f40c4082d51e3f683
2017-05-31Fix cpplintvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2481 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3e39324360996e408351421a2185c2cd9e6ee1ae
2017-05-31Fix cpplint and cppcheckvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2480 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9ad6fc7b096fff02a8696515c074ddd92980a8e2
2017-05-30Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2479 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bfadffa81f3cd05c8d4a4c911853ad2f2cd0ac36
2017-05-30Fix copyrightvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2478 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a39e151c31bdf4968f5cc09cc8fd3115d2eaed3e
2017-05-30clang format all sourcesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2477 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 326d664483d6700f82be824f79a0bf5c082b4945
2017-05-30Fix doc typovrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2476 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: eee441e3902a0995a8356d76007664fe559f3036
2017-05-30Fix spell checker errorsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2475 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 94422e6f356532b2db4dc5a55cbb851210b3c36d
2017-05-30Clean-upcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2474 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9586b4987dad745fa60bca1a433349a2f78fa9bd
2017-05-30Remove debug codecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2473 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 458dcfcf18b36f8dd0023dfe5af0d6083d1c7684
2017-05-30Typovrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2472 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 457b970258b8a99519db664358c19d0dee80d879
2017-05-30Rename Gudhi_stat in Persistence representationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2471 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5307a48496d758110274ef021834394b0a60bf95
2017-05-30Merge gudhi_stat branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2470 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2067fcd13bd6d8549fccf63f1d03fd31bc783cc8
2017-05-30Merge cmake_modules_for_gudhi branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2469 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a7ae351317d741b2657b0fcde335393fbdfc1630
2017-05-30Merge last trunk modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_modules_for_gudhi@2468 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0fc91d24907c2259fba5b7bb7d3f870ea1a68d9e
2017-05-30Make install examples mechanismvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_modules_for_gudhi@2467 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 018b6e55c392b37d02503e7822e0a586061c987d
2017-05-30A branch in order to integrate persistence representation branch (named ↵vrouvrea
gudhi_stat) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_representation_integration@2466 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: df498589be1980983e786f83e6d2c1368c18aa1f
2017-05-30Add a warningvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_modules_for_gudhi@2465 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a873c9c6fff031968747c3dec197aec06738c32a
2017-05-29Add 2 new variants of read_persistence_diagram_from_filecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2463 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bd0dd2c981856c8e1a51b2b97ac10d9edd59f694
2017-05-23read_persistence_diagram_from_file now uses an output iteratorcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2455 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3969666dcde3581a75789c5a4b62817dea553f9f
2017-05-19Move src/common/utilities/hypergenerator.cpp in src/common/utilitiesvrouvrea
Management of Python distribution packages make install is now installing utilities and GUDHI python module git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_modules_for_gudhi@2453 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a85576c7ae062718900f0db2bfb0dd3f26e87177
2017-05-19Remove DEBUG_TRACEScjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2446 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2290435a73db6bea9297fa79e10f7e36be10a43e
2017-05-18Modify the way cmake handles utilities, examples, test and benchmarks with ↵vrouvrea
new options to activate/desactivate them. Move hypergenerator as a common utility. Move random point generation from hypergenerator in src/common/include/gudhi/random_point_generators.h git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_modules_for_gudhi@2442 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e2d13e4b0c09455fb604b684f6d71530352271eb
2017-05-17This branch is to develop modules in order to simplify and factorize GUDHI CMakevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_modules_for_gudhi@2441 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 184e041ce8e7f5687076b28a91e57490eb6c8576
2017-05-16Use read_persistence_diagram_from_file in this examplecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2440 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cb5cbba3f968c6cd16025250076bbe1df4f2e11a
2017-05-16Add read_persistence_diagram_from_filecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2439 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 026fbb0528343a15a46935ded3aaf13297afeff5
2017-05-16git-svn-id: ↵cjamin
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/read_persistence_from_file@2438 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 928b03076f7a40e4d9b09e663e618fdba2d89e57
2017-05-16Merge doxygen_using_mathjax branch with a local copy of MathJax.jsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2434 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9c6260d7b0f91420f0b3dc71d0ba04a422937b86
2017-05-16Modify Doxyfile to make it work with distributed MathJax.jsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/doxygen_using_mathjax@2433 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 386ef39799695204b98d43b5a2f36a1a9e91f04e
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