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2015-10-18Update performance_rips_persistence, which hasn't been working for a long ↵glisse
time. We might want to run it in the testsuite with a smaller parameter so it doesn't take too long. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@863 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1fd91395f855297cf4815d64e94b06a8c400c99b
2015-10-12Fix program_options issue with MSVCvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@850 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b2a90b0c494f0eae1da67e23527946733d501643
2015-10-08cpplint fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@845 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8b15f0805527b494f3a57625de5c69d836b287dd
2015-10-08Fix cpplint on examples.vrouvrea
Bug fix on persistence_from_simple_simplex_tree. Add persistence examples tests. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@843 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9b7b73abb4a5d6bb110376deb689247bfdae035c
2015-10-05No need for Persistent_cohomology_column to have everything private.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@828 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9eea246613f29f78d88e8f1b25cf341c05e5098c
2015-10-05cpplint fixes - simplex_tree_from_file.cpp renamed ↵vrouvrea
simplex_tree_from_cliques_of_graph.cpp - #include "" vs #include <> for skeleton blockers git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@826 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1bd1ad535e4283bce35eeb31fa8d7896b9de474b
2015-10-02Doxygen to be made from user version. Hypergenerator fix. Add definitions ↵vrouvrea
for debug traces. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@821 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5625aaab792264df86d7d442a2e6ff9886cf5d24
2015-09-28Minor optimization: no need to return memory to the dying pool.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/pool@803 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5ea7edddd00890a060d4a77302d239e9e8ef0c85
2015-09-28Merge from trunkglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/pool@802 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4928a537016044c8263cf7f4980caabfcdd108a0
2015-09-28Release CAM cells.glisse
There are a lot of intrusive containers in there, and I believe that most could be replaced with regular containers. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@800 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7246d7db0511ac6bffee2f645c006416a986629d
2015-09-28Minor clean-ups (const, for-range, etc).glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@798 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: de10cc12d852eab34e258bbfb98ff0aef864e453
2015-09-26Replace boost::object_pool by a simpler, more scalable version.glisse
Not ready for trunk, it causes a memory leak, visible for instance with valgrind on PersistentCohomologyMultiFieldUT. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/pool@797 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 20a8296db22f253d49c10edd565557123fdc7c6f
2015-09-16Filtration_simplex_iterator's reference type does not have to be a ↵glisse
reference, and Simplex_handle has to be cheap anyway. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@789 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a3fbf340b9ab3d2186616f14f4b96d3188dafd14
2015-08-20Store num_simplices in persistent_cohomology to avoid to call the function 3 ↵vrouvrea
times. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/num_simplices@748 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 868c69508bd6307c805cfc1a0cab00631c79c000
2015-08-19num_simplices computation instead of increment/set methods.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/num_simplices@743 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 42bad5e259ea540b5ec020f293b2dff86c83101f
2015-07-11Clean-upsglisse
Avoid duplicate search with find+insert. No need to store 0 and 1 and return them by reference. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@702 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 28403136284a9fe2044b9d51bc2f10861b3a09e7
2015-07-11Clean-upsglisse
Use vector instead of list. Use emplace more. Use std::max. Some const. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@701 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 275156e94b4c9900c0af43ed7b74c7bff40bd7fd
2015-07-08Clang boost test segmentation fault fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@697 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ddfc6fe41d7112fd6b6c68eadf45e468f2c8904b
2015-06-30clang requires include fstream (Persistent_cohomology.h)vrouvrea
clang build fails if include guard macro are not correctly defined + goole style fix (Skeleton_blockers_simplices_iterators.h) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/compil_fix@665 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4bbc74ac4726af768816c322bf77e104a1dcf1e6
2015-06-19Trivial clean-upsglisse
- add static/const to some member functions - remove an unused variable - don't pass int by const& git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/constify-ST@632 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d8742bf06caf10115ba4b5157e81bfd7bf8d6e15
2015-04-27This trace is not neededvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@577 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d27d2814b1437e3cad6d87d1c77a39136379a13c
2015-04-27Remove debug traces by defaultvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@576 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 665d5365d12317bd62ce57a94f43247e6a1e55e4
2015-04-25Don't skip destructors even if the type is currently POD.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@574 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ba20755d2b52257f02ae4880a619f7bcc2ac1b14
2015-04-25Let destructors do the cleanup.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@573 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a8e9e64a5317ab368832facdf8e34739cfe9b473
2015-04-24Plug small leak.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@572 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 023a64fe20ea940a9f47a101cce627b7facf2f41
2015-04-24Unnecessary new+delete pair.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@571 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 35f4b8e850bba9b72ab9e732dead3c0393e66a9a
2015-04-10Optimization of UT (needs to be short time)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/multifieldoptimization@560 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3e1561da87b9a46f8628a59c3862c0235eee01c5
2015-04-02Merge xunit branch back into trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@537 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1d7c35db28bfead8c5f93dde47c5c695e5ec5c68
2015-04-02add gprof tags - cpplint_to_cppcheckxml.py fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/xunit@533 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fd6945efd5d63d78fd1f5120bf708a3aebdb90f5
2015-04-01GCovr replaces lcov - cpplint_to_cppcheckxml to be conform with xml version 2 vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/xunit@529 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e042eea0b285159f071afb0d07729e6c381f036d
2015-04-01Add gcovr code coverage for Corbera Jenkins pluginvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/xunit@523 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 094ab5eb2bc10d062c669ccb6747c3b87d69b23b
2015-03-31xunit purpose modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/xunit@519 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e9d555de2c1452010be4faa13178e86ae2b77e8d
2015-03-31Add tests name for xunitvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/xunit@517 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fe517d2d9e8ea4a6660c4c9d510912f393ecfcb8
2015-03-31For xunit test purposevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/xunit@514 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 547d5e7d5b1e598d62600838418d25b305db484c
2015-02-06Add of persistence computation from a simple simplex tree - Fix of infinite ↵vrouvrea
persistent (1.#INF under windows) UT git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@462 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f08233c68f60962fa6caa5603b3a8b4a16b2bb76
2015-02-06Fix of unitary tests under windowsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@460 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 93a416618a19024dca350c07509a838314fb32ea
2015-01-30Add insert_simplex_and_subfaces. Insert renamed insert_simplex. TU modified. ↵vrouvrea
Filtration propagation to be done. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@446 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 26cbe4f4abb3bdd5fb88959fd94f6ef30d283c3f
2015-01-28Rollback uin16_t to intvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@433 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6f25b6c7263c3eca9aa5579a4a5e6eedd9dd0464
2015-01-27explications pour la persistencesalinasd
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@422 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 912916cab9c8ce2b3b68c466a6e9fac8ecc24c26
2015-01-21Errors fix in CMakeLists.txt for alpha_shapes_persistence and Windowsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/TDA_dev_1.1.0@418 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 31c3aa0afffab970cc9c65882221173bd1157e85
2015-01-15test on CMakeListvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@411 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c5b0d81d3e77e590fa99f6ca288ce17b4a12f5cc
2015-01-15Merged latest trunk changes to my_branch and fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/TDA_dev_1.1.0@409 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2463ee9b0f8b69e3edbda4e8189eb61606e0af93
2015-01-13Minimum persistence is float formatvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/TDA_dev_1.1.0@408 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ae81df140a70c1e1656487ddc7c6c4e697f4e69c
2015-01-13new alpha shapes persistence example vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/TDA_dev_1.1.0@407 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c261b88e39db9a910d90dccbcb1798287b0ed6da
2015-01-06CMake modification for Windows/Linux comilationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@405 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 76e81b3769a39f13b14be50f5380ed2254c92c94
2014-12-19git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@397 ↵glisse
636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dee74763ef7ee12bc36b6ca28f22df1d8e6e3402
2014-12-19Update CMakeLists.txt with Boost program_optionsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@394 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 180f71a06e54aa8482d8e588a9f4efb32a6fcf94
2014-12-19find_package with version number is not workingvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@391 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 83fa487685b5a403c18444859d504cefaed422f7
2014-12-18git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@387 ↵salinasd
636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f1da07dec37086bcf40a92ea05a245dac0e62f8b
2014-12-18remove useless linkage in cmakelists.txtsalinasd
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@380 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fd906d3e118c4d870509e5f683eed0e50c65f588
generated by cgit v1.2.3 (git 2.39.1) at 2024-07-04 13:15:40 +0000