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2018-06-14css for https version of the website must be in a valid https locationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3616 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6a85178a0299c744e26b7a98e92c515d9a721039
2018-06-14New website header to facilitate releasesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3614 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aca53e98d8dbfcdde96df5be045acc012ba8608f
2018-06-13Fix cpplintvrouvrea
Merge branch persistence_representation_bug_fix_vincent rev. 3600 git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3603 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7e9364e5294b3433eddcebf273924193da3b0742
2018-06-13Rollback these commit (was just for beta version documentation website)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3602 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c0182e445f444bbf1add347dac217322262db033
2018-06-13Fix cppcheck issuesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3601 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 44cc04b1609d3b3d40382fd02d4fe15e5ba0159f
2018-06-07fix Cubical python documentation (no more simplicial references for periodic)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3555 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 198a65222029760e0ff5cd5e576c3281833b307c
2018-06-06Merge of branch thread_local_optional_vincent to take into account XCode < ↵vrouvrea
v.8 as thread local is not available git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3554 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9dcf072a4606d1131a925bca4571f0f1b5547d14
2018-06-06Doc review : warn about cubical betti numbers function and remove simplicial ↵vrouvrea
references for cubical git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3546 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 41399f9e8aec2ab914368822cd288b1a08839085
2018-06-06Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3544 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 52665a1261ca785f1afe641c483bd65d28045f62
2018-06-06Fix sphinx warning and issues due to new version of sphinxvrouvrea
Modify the doc for persistence diagram git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3543 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3efbc052bce9a11a6b4a758f8229e91eece2a7f4
2018-06-05Add new layout for documentation website for Doxygen (C++) and sphinx (Python)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3539 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2dc9edea317426fad7a7d99d849145845eb75bb9
2018-05-30Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3495 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4033114216c767ad4028e3f6d4ccb5f5dfb88f78
2018-05-30Add install requires matplotlib and numpy in setup.pyvrouvrea
Add Python test fail explanation git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3494 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1bac18228a22ea718bb8c77d38efdf84f9b228eb
2018-05-25Fix bug on Cubical reported by user.vrouvrea
Add test on Python level. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3461 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fffa8df624f81427d0feef6ddc3f8a567aa2d366
2018-05-23Legend in the right bottom cornervrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3453 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 221e39777dd55397a0260a2c83f590db610fdb76
2018-05-23Modify documentation for Simplex_tree make_filtration_non_decreasingvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3452 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 304779c7952985d651750aded78cb32c6e583555
2018-05-22Add CMake 3.1 in installation requirements.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3450 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bae61cf108841dae3ff1be5953eb9f87f1713e41
2018-05-15Seems to be fixed.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_v3_vincent@3446 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 01f10ae61484982dc99fd67573d9ca61ffbbec0a
2018-05-15CMake minimal version is now 3.1vrouvrea
Compilation flags are now externalized in cmake/modules Add NO_POLICY_SCOPE for GUDHI_third_parties to fix warnings Try to fix CGAL 4.12 that is no more setting CGAL_LIBRARIES git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_v3_vincent@3445 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0ac7613f016e28cc634606f76e85ecaf5bacb2d4
2018-05-02Add Python Simplex_tree make_filtration_non_decreasing interface and its testsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3409 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6a3af66b3d90c6114886e54c5c34287a13f4b863
2018-04-27Remove show_palette_valuesvrouvrea
Add legend flag to display the legend Set rips threshold to 0.3 for users not to be surprised when playing with threshold git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3406 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 03999711eafb81748a82b5725482a9f0d4307861
2018-04-27persistence_graphical_tools documentation clarificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3405 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5b38ba745e20585c35263e2880b8511299e11129
2018-04-27Code and doc review with IFPEN :vrouvrea
plot_*: c'est quoi ce paramètre alpha ? band_boot: Renommer en 'band', sans référence au bootstrap. Ne pas l'utiliser dans la majorité des exemples / tutos. max_plots: mettre une valeur par défaut, pour éviter qu'on se retrouve trop facilement coincé à attendre 1h qu'il affiche des points. Éventuellement afficher un message indiquant que certains points n'ont pas été affichés et comment changer ça. barcode: trier les barres par date de naissance (le faire tout le temps ou avoir une option et le faire par défaut). git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3404 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cfa775e425fbf12da1758d601ccbd80a2c7d3bc9
2018-04-26Fix Copyrightsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/copyright_clarification_vincent@3400 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ff348beedf92656c6913c2a1df983b5804b33988
2018-04-25persistence_pairs Python versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3393 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5ee633545ca5754b605cdd789ca9720f5936998a
2018-04-24Fix Python tangential complex versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/python_2.1.0_fix_vincent@3392 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f0d9e008229a6cd7868f4afd11eaf3c566e81adf
2018-04-12Add a CMake option in order to use TBB or not. Default is ONvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3375 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fbe41ee9e7771095e34b6c12adbacddf9484f1b1
2018-04-04Merge sparse rips branch in trunkvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3336 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 01dcab006197637ccba9c29f8990375fe05ad7b4
2018-04-03Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3327 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 85b28237989b93fb4b5f8629a7f28bdb51b9a1b1
2018-04-03Add warnings for rips persistence from correlation matrix (points under the ↵vrouvrea
diagonal). Use range instead of vector in write_persistence_intervals_to_stream git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3326 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ea0fdc32c91f1927c5a9f2a3864360895ce8128a
2018-03-08Web site review after Editorial Boardvrouvrea
Do not need to import gudhi twice in py git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3270 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7d7a4bba27f4cbcad5f8b18cb86587a15e6a8435
2018-02-05Do like C++ examplevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3217 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cc963c77e30c649e7428afc609bac4ba1f515a37
2018-02-02Merge last trunk modificatvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/rips_complex_from_correlation_matrix@3212 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ea6296547b67ad82f5983d4309493e9131da7dd0
2018-02-02Fix after version release of Cover complex and Persistence representation ↵vrouvrea
installations Fix utils download link git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3211 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9596df8b0d0cdc3d8df79aa367a26b34a96d7f5e
2018-01-31Modify header (cpp and python) to fit with the new website sectionsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3192 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1dc2f0745020db4a27649c55dc1d01397b0a403c
2018-01-26Add doc Copyright for Python partvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3168 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fccabadc27b805caecaab99517df80fab1113d73
2017-12-19Boost minimal version is 1.48.0 (modification rollback) - if boost_version ↵vrouvrea
use static_vector (from Boost 1.54.0) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3090 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 487d902c645793f2647191a0d8f9218184fa19de
2017-12-18Boost minimal version is now 1.56.0vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3081 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c3f409eb75ecb7a7f08735a99549c15662b7e5fe
2017-12-14Merge of branch misc-glissevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3074 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d0842416dbf4ee1ff25a7421841efe8f097e5379
2017-12-09Doc review: bad example link for euclidean strong witness Python examplevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3063 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 16af7cb7d034eb3ca17ecd037f97e6d4d44e3d54
2017-12-08File formats for iso cuboid and perseus in the Python versionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3057 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 6eb0a025d8549320e03727ce491563b2a941c82d
2017-12-02remove dead variable max_dimglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@3011 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: efdeef33160a5a0d8c033ff5b049ee6907d84671
2017-12-01Fix cubical periodic cythonizationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3004 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 664770dcae1726b94d4a486c376d1d2f744371eb
2017-11-30python doc clarificationsglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/misc-glisse@3001 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9dc859e34125fc163c02a32353879b59fff610a7
2017-11-22Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2931 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 44ca09283b600e6af453eb3507bb4ec92b31948b
2017-11-20assign_filtration bindingvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2918 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 390839c0f172993f6117746d08c5a22c00778c5f
2017-11-20Add upper_bound_dimension and associated documentation for automatic ↵vrouvrea
dimension set. prune_above_filtration cythonization git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/set_dimension_mechanism_precision@2917 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 12af3c5c2d6012c43d80cc95e1ecc8a2c0df340e
2017-11-17Homogenize shebang for Python scripts used as executablesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2903 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 904aff059b880e4e197fd81c46160d53b5794998
2017-11-13Thanks to code coverage, I fugured out some tests were not performed because ↵vrouvrea
of teir same name git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2872 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9c2158b7e0e77ad7ce8812bdfac312f3f7daf992
2017-11-13User feedback : documentation shall explain the default homology_coeff_field ↵vrouvrea
is set to '11' in Simplex_tree Python bindings. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@2870 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3db5b073fce8ca99271d20690e3559c3a0a6557d
generated by cgit v1.2.3 (git 2.39.1) at 2024-07-05 14:41:47 +0000