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2020-12-19Docstring improvements in RipsComplexUmberto Lupo
- create_simplex_tree method referred to the Delaunay triangulation instead of the flag complex - "rips" was not capitalized - "double" was used in the docs but only "float" (which has double precision) is a Python type
2020-12-14Fix sphinx warning and doc identationROUVREAU Vincent
2020-12-12Merge pull request #436 from VincentRouvreau/ci_without_cgalVincent Rouvreau
Add build and tests wo cgal and eigen and wo cgal
2020-12-11code review: throw an eception if collapse_edges when no Eigen3ROUVREAU Vincent
2020-12-11code review: GUDHI_USE_EIGEN3 generated by CMake in __init__.py as suggested ↵ROUVREAU Vincent
and roll back the other solution
2020-12-10Merge pull request #408 from mglisse/subsampleMarc Glisse
Clean-ups in subsampling
2020-12-09Fix #388ROUVREAU Vincent
2020-12-08Fix #388 for the tests to passROUVREAU Vincent
2020-11-18merge master and resolve conflictsROUVREAU Vincent
2020-11-09Don't test the equality case in sparsify_point_set. sqrt.Marc Glisse
2020-11-07Swap clip with int conversionMarc Glisse
This allows correct handling of infinite values.
2020-11-05More numpy in BettiCurveMarc Glisse
suggested by @raphaeltinarrage
2020-11-03Add comment in code for get_boundaries if not interested in filtration valuesROUVREAU Vincent
2020-11-02Merge master and resolve conflictsROUVREAU Vincent
2020-10-22Document the changeMarc Glisse
It would be possible to emit the duplicate points instead of stopping, but the current implementation makes that inconvenient.
2020-09-28doc review: improve reset_filtration documentationROUVREAU Vincent
2020-09-28code review: Let the exception propagateROUVREAU Vincent
2020-08-25Code review: min_dim = 0 as default and some doc reviewROUVREAU Vincent
2020-08-21Add link to extended persistence notebookROUVREAU Vincent
2020-08-18reset_filtration from a dimension (instead of 'until')ROUVREAU Vincent
2020-08-18Merge master and resolve conflictsROUVREAU Vincent
2020-08-18Merge master & resolve conflictsROUVREAU Vincent
2020-08-12code review: boundaries uses only once find and return a pair of iterator. ↵ROUVREAU Vincent
Exception is raised when not found. tested
2020-08-12Update src/python/gudhi/simplex_tree.pyxVincent Rouvreau
Co-authored-by: Marc Glisse <marc.glisse@inria.fr>
2020-08-04Remove JAX from the documentationMarc Glisse
jax.grad does not work with our functions (I think it used to work...)
2020-08-04fix wasserstein autodiffMathieuCarriere
2020-08-03Merge pull request #368 from VincentRouvreau/matplotlib_latex_desactivationVincent Rouvreau
Add mechanism to deactivate LaTeX matplotlib rendering
2020-08-03code review: no need to test if pointer is NULLROUVREAU Vincent
2020-07-31Rebuild example page and link to example. Add also a link to the ↵ROUVREAU Vincent
publication. Doc review: document edge collapse ignores simplices of higher dimension.
2020-07-31code review: nogil and use ptr as suggestedROUVREAU Vincent
2020-07-30collapse edges for python simplex treeROUVREAU Vincent
2020-07-28Code review: rollback lru_cacheROUVREAU Vincent
2020-07-28Code review: Do not print warnings on import gudhiROUVREAU Vincent
2020-07-28Add mechanism to deactivate LaTeX matplotlib renderingROUVREAU Vincent
2020-07-23Merge pull request #348 from martinroyer/atolVincent Rouvreau
Introduction of ATOL in finite vectorisation method
2020-07-03A proposal for simplex_tree reset_filtration (python & C++)ROUVREAU Vincent
2020-07-03A fix proposal for boudaries of a simplex python versionROUVREAU Vincent
2020-07-03small optimmartinroyer-buntu
2020-07-02Fix #358ROUVREAU Vincent
2020-07-02Merge pull request #355 from VincentRouvreau/alpha_complex_3d_pythonVincent Rouvreau
Alpha complex is using 3d version in dim 3
2020-07-01Merge pull request #349 from tlacombe/fix342Vincent Rouvreau
fix #342
2020-07-01Doc review: add some details about get_pointROUVREAU Vincent
2020-06-29Merge pull request #357 from ↵Vincent Rouvreau
VincentRouvreau/no_latex_for_matplotlib_if_not_available No latex for matplotlib if not available
2020-06-29Merge branch 'master' into fix342Théo Lacombe
2020-06-29update doc in wasserstein.wasserstein to reflect change in default paramtlacombe
2020-06-29update default param for representation.metricstlacombe
2020-06-25cache checkdep_usetex valueROUVREAU Vincent
2020-06-22Merge branch 'master' into alpha_complex_3d_pythonROUVREAU Vincent
2020-06-19Mention the 2 billion limit in the docMarc Glisse
2020-06-19fix for null inertiasmartinroyer
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