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2018-10-04Merge branch windows_warning_removal_vincent to fix warning level at 3 for ↵vrouvrea
Windows (level 4 is too verbose) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3929 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fff76c74c6ccea48e3bba55fe929e58557c09b3e
2018-10-04Merge of branch plot_persistence_density_vincentvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3927 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a996b8e1ddcdb53f9ea6dff341ae5f1bad26639c
2018-10-03Modify "-pedantic" compiler option management in order to be tracedvrouvrea
Modify windows warning level git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_warning_removal_vincent@3926 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1c6e61fb968b6b4072b86a520e2edf78aedf1ffa
2018-10-02Merge of last modifications on Nerve_GIC branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3923 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 785b87581429e8973b9660db0940b9dfb5d37827
2018-10-02Catch exception by const&glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3922 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1b0cea99516d6b42e5ab3b0fdb21468b321e6d6c
2018-10-02Doc review : Explain that plot persistence density function doesn't handle ↵vrouvrea
degenerate data git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3920 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7794f7959b98b0245e26077d2f2639f33655d5c9
2018-10-02Code review : remove executable propertyvrouvrea
Doc review : Rephrase inf_delta explanation git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3919 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b45697b675a20cdca7bb42fa7a555df6c35fe0fd
2018-10-02Doc review : "Selected points are" -> "Selected intervals are"vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3918 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 79857a4609428fc623f8f4656762261ea664cf12
2018-10-02Doc review: max_intervals documentation in plot_persistence_densityvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3917 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 90cfd77ad4aad4cdb0937f43dd4f802688f98295
2018-09-28Fix typo in installationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3915 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b7f7c3344fef9915a48ee29764063a91f3d860a4
2018-09-28Python Nerve and Graph Induced Complex was introduced in GUDHI 2.3.0 (not 2.1.0)vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3914 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8e34cf876daf73288caed371c7ce9c51f07fbf7f
2018-09-28https://gitlab.inria.fr/GUDHI/gudhi-devel/issues/32 - [Cmake - Qt5] CMake ↵vrouvrea
outputs an error when Qt5 is not installed Modify/add cmake messages for missing modules git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/cmake_missing_modules_clarification_vincent@3912 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 37e1035f7c27ce994e05386801d72959696de7d4
2018-09-20fixed small bug on persistence diagramsmcarrier
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@3901 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cbeecd2f928b4c4df13acf5a7a2083882fdc98d2
2018-09-18git-svn-id: ↵mcarrier
svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@3897 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f5fe42a6f42443ca7217c69f8a18780cdb85669e
2018-09-10Code review : More explicit message when import fails in plot persistence ↵vrouvrea
graphical tools git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3881 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 96f9e3da3bd68d6cba65242b9890c4beb463c863
2018-09-10Doc review : Add a link to scipy.stats.gaussian_kde official documentationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3878 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: dd6e1a4131be1ed0306a48f9b095e0d09ddee848
2018-09-04Use debug or release version to link with python packagevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3871 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: afbd5c833ddc3a525d7091ab186714825109eb87
2018-08-31Link with release third parties library version, even in debug modevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3863 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e33e15081b3029d9dfd4edc464d91b0db47e1754
2018-08-31Works fine in debug and release modevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3857 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2cc11e2a6e7f8eed6c234c17cad7ff04efdbc659
2018-08-31Try with boost release and debug lib versionsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3856 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 130a4319577ef0ec8c10a87c98b7ffcf6f16d808
2018-08-31Pass parameters to cmake function through double quote for unset variables casevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3855 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 57ff4e884e6575cc7938da3937a7a0090567ad74
2018-08-31Add CGAL_LIBRARIESvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3854 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0b8ee8cf61dca1b74481d556615e55caa39246ae
2018-08-31Add debug tracesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3853 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e8792fc3427cb4f4e92f3297aa3f4aea57c54e60
2018-08-31Add debug tracesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3852 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1a99305e1bfab4d86f5a10371dbad3438f3b0580
2018-08-31Add debug tracesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/windows_cgal_non_header_only_compilation_issue@3851 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 00f56b397048aca87422e6da9385b2622acf1094
2018-08-30A thread_local was missingvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3845 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 739268e9feab840a1d8a405dad696ca95330623a
2018-08-28added function to read point cloud from array in memory + changed a little ↵mcarrier
bit the API git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@3841 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f31a3a60b2438d7b767a1ee310d859477330a743
2018-08-17Makes clearer dependencies for each function of persistence graphical toolsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3804 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7572f54368ff235f5e78df74121bf6b1ee107177
2018-08-17Code review : rename max_plots and max_barcodes as max_intervals for ↵vrouvrea
peristence_graphical_tools git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3803 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ad73f7e6cc6d72c3ba24b5ac947265c78a29f387
2018-08-17Code review : Rename max_plots with max_intervals for persistence densityvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3801 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8d20ee2f721b856bba69bc5bc10db26032649129
2018-08-17Doc review : inf_delta explanation improvementvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3800 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 01fff74d79228431d77a46b713ac656ab7e84dc0
2018-08-17Code review : Add a bw_method parameter to plot_persistence_density for the ↵vrouvrea
standard deviation of the Gaussian git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3799 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3bbc988434951bb429acd44b1f31f8310bb9ba9c
2018-08-17doc review : modification of persistence barcode example to make it more ↵vrouvrea
relevant git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3796 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 17acc09cdf7d09b13c177334efb1e309c4fd8d9c
2018-08-17Doc review : rephrase max_plots explanationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3795 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f6059d3a242eed53dfdddb76ffed33f99892f4bc
2018-08-17Code review : add a parameter to select dimension for ↵vrouvrea
plot_persistence_density. Default is None and mix all dimensions git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3794 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 493f5ecfad2bcf0ee4a40ec7b315863c471d088f
2018-08-16Bug fixvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3788 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d8b898ca963d8d956307bb1dfd8abea1acbe6c96
2018-08-16Code review : Try to import module. Functions are unavailable if not available.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3785 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 53c89a30f7992aa8d20e8330628c03291cea6473
2018-08-13Clarify installation, utilities and examples generationvrouvrea
Add a link to the Hello GUDHI World project git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3776 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bb4dea879baac0280b38ee7ab9f466e0c090a38c
2018-08-13Modify GUDHIConfig.cmake in order to have :vrouvrea
Order is : 1. user defined GUDHI_INCLUDE_DIRS 2. ${CMAKE_SOURCE_DIR}/include => Where the 'cmake' has been done 3. ${CMAKE_INSTALL_PREFIX}/include => Where the 'make install' has been performed git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3775 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 506357257ce261cb2778e357ca902401da4838e7
2018-08-09GUDHI_CAN_USE_CXX11_THREAD_LOCAL was missing in ↵vrouvrea
Persistent_cohomology::annotation_of_the_boundary git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3764 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7d53de701470203e48f76896e2859d1df670564c
2018-08-09Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3763 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 96af633598ea1efa65ce9b78742628722f469d9e
2018-08-09Merge ninja_cmake_warning_fix_vincent branchvrouvrea
Fix issues #4, 6, 13, 14, 15, 21 git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3760 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 32b5cc470f6095a64f102e0e641e13d2fc9d63ff
2018-08-09Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/plot_persistence_density_vincent@3759 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1f3867c19d9a559dc8d56c81d6088820acc4ac9c
2018-08-09Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3757 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f7f31a9a2448c7e894aa63b46360f59bc92f54b3
2018-08-09Make soft dependency for matplotlib and numpy dependenciesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3756 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 13a2e6e3eea8a36d0b9bdb4ab1c34f940a8932dc
2018-08-08Fix issue #4 : [CMake - global] List all that is missingvrouvrea
#21 : [python - global] Additional information on how GUDHI was compiled could help to debug users problems git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3751 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ded8b49b7e282dbf262df5695f2b5285a9907551
2018-08-07Fix issue #13 : [Global - utilities] use exit(-1) instead of std::abort in ↵vrouvrea
utilities git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3749 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3235f72cc618dcb6ab70b1826a4d3ce2608fa168
2018-08-07Doxyfile is now generated to facilitate gudhi version packaging and new ↵vrouvrea
module process Doxyfile.in generates a build/src/Doxyfile that is copied by the user_version target (to avoid file generation in sources) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3748 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0a5ab637c2db102a59c994f03f0ec7fadbda3780
2018-08-07Remove if cmake version in GUDHI_user_version_targetvrouvrea
doxygen target is depending on user_version only if defined (defined in dev version, but not on user version) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ninja_cmake_warning_fix_vincent@3747 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2e9533581d7b9ec231b27b7c405dd3817baf4911
2018-08-06Fix issue #14 : [RipsComplex] max_edge_length documented with type 'int'vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@3743 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9ef2e20e818fc1c573ce784cd34acb3c6d9970b7
generated by cgit v1.2.3 (git 2.39.1) at 2024-07-25 08:16:05 +0000