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2016-10-05Merge of off_files_only branchvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1638 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1892bc92e16add4b4b31947923e428ddbe4385b6
2016-10-05Rename cliques_of_graph with filtered_simplicial_complexvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/off_files_only@1637 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ca064800d5bab02c0dea01f1cf5b0b6d08755889
2016-10-04Strong witness is ready as wellskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1636 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1e50ece69054b45787353c37877fdfa970209f20
2016-10-04Fixed a major bug in the Active_witness_iteratorskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1633 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d4f474b44835b11e65a152f9d3fe87cc32b527f5
2016-10-04Use std::size_t instead of unsignedcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1625 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: cfc0013c1247512eb4899809975266a971d57c34
2016-10-04Don't use Point_d(std::array<FT,4>...cjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1624 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b91315785cc6fbab1843b8f0e2d1778e920998b9
2016-10-04Test: kns, kfs... => knn, kfn...cjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1623 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 91343f21d81ab127ba6efbf472d153cb4be3f040
2016-10-04Kernel => Search_traitscjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1622 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 72ecfe733a43c52ab82e3377e22fe47655b77b1f
2016-10-04Mention farthest search option everywherecjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1621 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 098ada4430780a45eb01a2b25be275752370a08e
2016-10-04kns, kfs... => knn, kfn...cjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1620 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4965c110b94a8ff1e919464a1f55ec3e62fd8bbf
2016-10-04Recommend the user to read CGAL doccjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1619 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a4c42c45551039c634b60cc9fa21b12bb4c907ba
2016-10-04Modify the example to avoid misleading the usercjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1618 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fa4a318f59e6d6dea46694bd71d0a6a2baf1aaff
2016-10-04Changed the second choose_n_farthest_points' incostistenciesskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1614 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 285b607d598b0f50efd6d4f1f3d4e38dfc2d097a
2016-10-04witness_complex_from_file uses off files nowvrouvrea
Remove non-OFF files from repository git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/off_files_only@1613 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d663eec701576a64c4c4af03d61da334a055c3d4
2016-10-03Rephrase create_complex.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1609 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8e21ddb519ab3dc87f6de08f6f7fcb38848bfc78
2016-10-03No need of complex.dimension(void). It reduces the concept.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1608 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 95cf6a9b453349e032c1d553bb9b5c3981c92b0a
2016-10-03Precise insert_simplex_and_subfaces conceptvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1607 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8686088820bac273354d451b237953f984c7bd02
2016-10-03get_point can return a const Point&vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1606 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 44cec97d381409fdc2a707300c2fe93c67428e09
2016-10-03Remove confusing post condition of ctorvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1605 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 8ba221d495b3ab167e3e151af07e68bfcfa015e4
2016-10-03Rephrase the alpha complex data structurevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1604 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b9d99909027944d2a98096830646bda36b18ec9b
2016-09-30Weak Witness + Active Witness. It seems to work.skachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1595 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 04b616907f9173e7b3cffebcd8b167a0413eb687
2016-09-30New name for qglviewer on Debian.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1594 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: adcfb859f07edcc68442bda54a8b26997ba1498c
2016-09-29Weak Witness + Active Witness. It compilesskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1593 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7307e01148fc7cadfc22bd136ebdf0d55c8da937
2016-09-28Rewrite for the Weak Witness Complexskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1586 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 00d6d906598893ab551157c00020ce33fe19cb5b
2016-09-28Unused typedefcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1584 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1b8fa44e98da75619a411c1d6058ccebff9ac350
2016-09-28Commit before a merge with subsamplingskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1583 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c4ad9a3579b2e024b88402207ca58a8995167170
2016-09-28Merged trunk into relaxed witness branchskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1579 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a9ca2e7a968ebf4bb80cfa795965ae78511e8dd4
2016-09-28All work up until nowskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/relaxed-witness@1578 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a9379060f1edfbc419e259b2e207ebc608798803
2016-09-23Examples shall use only off filesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/off_files_only@1555 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 73833d163f3b76604a5111dc4374b635d60afade
2016-09-23Merge last trunk modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1552 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 59c20e186712d2b83c03c26f6f37077ac5f42e46
2016-09-23Fix doxygen warningsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1551 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 309e1612aa82a9aac11e160be6f89abbd751fd1c
2016-09-23Fix doxygen warningsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/warning_fix@1550 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 39ef2513b5d84cb392677ba10718f5e47734884c
2016-09-23Fix cpplintsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1548 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b8d7d5b4bde8aeec92d6bfc79b8c146c551317c0
2016-09-23Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1547 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a28fa4cae05c17b94d3737697e39cdf1e970d03e
2016-09-23Modify the Alpha complex doc wit a concept to create a simplicial complex ↵vrouvrea
from alpha complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1546 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d8083c3b0e03e1cf0033e5c7c1ba6f95618efdc1
2016-09-22Fix a bug on gcc 4.2.1vrouvrea
reference to non-static member function must be called git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1544 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c5fdb03806241da2d7b0a92b73deb36791f74320
2016-09-22Fix typocjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1542 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b09cd3fd1ea7940d8787b0d9cd23d4d7e69d0925
2016-09-22Clean-up CMakeLists.txtcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1541 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 3204fef66b8a8358820531f8d6d2494c96a7226e
2016-09-22New template function create_complex for Alpha_complex to create the ↵vrouvrea
simplicial complex git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alpha_complex_create_complex@1540 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 24e53dc58d158166b976dd09760ad0e2acaf8e36
2016-09-22Spatial_tree_data_structure => Kd_tree_searchcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1538 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 095b038d0e4c1c6d78e9aa9efe73447b65dab2b1
2016-09-22Require CGAL 4.8.1 (furthest neighbor is bugged before)cjamin
See https://github.com/CGAL/cgal/pull/1105 git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1536 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fc980f30c107b39f8a47e18deb23820b411a9201
2016-09-22Require CGAL 4.8.1 (furthest neighbor is bugged before)cjamin
See https://github.com/CGAL/cgal/pull/1105 git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1535 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: da97775398bd24c7c1bd431686abd66cdf24005b
2016-09-21Modify test that is not working under Windowsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@1525 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0f9eca7c8a11b7578fe9cb5acf3097e704288c2d
2016-09-21Add packages in GUDHI_MODULEScjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1522 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fa1d4b4f1e0f6c437817e7bf6453d9fb1ca09df6
2016-09-21Merge from trunkcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1520 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 477d84d9b29057de29afbb77d830d9d46a8f54be
2016-09-20Fix CMakeListscjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1519 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a4a5956802d6c22370367180a2ab70aaff3d3cf9
2016-09-20Use boost::iterator_property_map instead of the pointer trickcjamin
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1518 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c1a1fc717ef32087617cff6f8bfa73836365b481
2016-09-20Changed the name of farthest point in intro docskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1517 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 83ad658d6fa02e8a1524bf0f363c8bac522c9406
2016-09-20Renamed pick_random_points -> pick_n_random_pointsskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1516 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 45cc8cca9debf56dd0d21762e537649dd92d9a4d
2016-09-20Changed the names of files as wellskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/subsampling_and_spatialsearching@1514 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: df3b82dc1d07b5d51b1c1bed4b5abd823129d4a8
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