Age | Commit message (Collapse) | Author | |
---|---|---|---|
2020-11-04 | Merge pull request #421 from mglisse/pythonfirst | Vincent Rouvreau | |
Build python first | |||
2020-11-04 | import matplotlib only when necessary in examples, in function of args. ↵ | ROUVREAU Vincent | |
Tests are without matplotlib, so no need to test if present | |||
2020-11-04 | Merge pull request #418 from VincentRouvreau/do_not_install_compiled_examples | Vincent Rouvreau | |
Do not install compiled examples | |||
2020-11-04 | Revert "Fix #416 by adding full path to introduction.rst - maybe strange ↵ | ROUVREAU Vincent | |
with conda or pip installation" This reverts commit 2d4c69d698df7e40709ec0e38463b4cf30ee388d. | |||
2020-11-04 | Build python first | Marc Glisse | |
This subdirectory is built sequentially and takes a very long time. Starting it first, in a parallel build, it is still the last to end, but since it started earlier it also ends earlier. Usually I build the plugin directly with python3 setup.py build_ext --inplace -j20 But I don't think there is a natural way to do that from the makefile (except for the unlimited -j), since I doubt setuptools knows how to cooperate with make, ninja, etc to share a pool of workers. | |||
2020-11-03 | Fix #415 by removing all install cmake targets from examples | ROUVREAU Vincent | |
2020-11-03 | Fix #416 by adding full path to introduction.rst - maybe strange with conda ↵ | ROUVREAU Vincent | |
or pip installation | |||
2020-11-03 | Add comment in code for get_boundaries if not interested in filtration values | ROUVREAU Vincent | |
2020-11-02 | Merge master and resolve conflicts | ROUVREAU Vincent | |
2020-10-28 | emplace_back | Marc Glisse | |
2020-10-22 | test with duplicated point | Marc Glisse | |
2020-10-22 | Simplify strange iterator use | Marc Glisse | |
the syntax with [] is already used a few lines above | |||
2020-10-22 | Document the change | Marc Glisse | |
It would be possible to emit the duplicate points instead of stopping, but the current implementation makes that inconvenient. | |||
2020-10-19 | Handle duplicated points | Marc Glisse | |
2020-10-16 | Merge pull request #396 from VincentRouvreau/tensorflow_wasserstein_test | Vincent Rouvreau | |
Added tests for wasserstein distance with tensorflow | |||
2020-10-05 | code review: move test_wasserstein_distance_grad from ↵ | ROUVREAU Vincent | |
test_wasserstein_distance.py to test_wasserstein_with_tensors.py | |||
2020-10-05 | Merge pull request #363 from VincentRouvreau/stree_reset_filtration | Vincent Rouvreau | |
A proposal for simplex_tree reset_filtration (python & C++) | |||
2020-09-29 | Added tests for wasserstein distance with tensorflow | ROUVREAU Vincent | |
2020-09-28 | code review: Simplify recursivity | ROUVREAU Vincent | |
2020-09-28 | doc review: improve reset_filtration documentation | ROUVREAU Vincent | |
2020-09-28 | code review: Let the exception propagate | ROUVREAU Vincent | |
2020-09-09 | Even if CGAL was requiring boost::thread no need to find it for gudhi. ↵ | ROUVREAU Vincent | |
boost::thread removed from cgal on https://github.com/CGAL/cgal/commit/8a7d3fa | |||
2020-09-08 | Remove boost::system | ROUVREAU Vincent | |
2020-09-08 | CMake > 3.5 to use Boost targets. Compile only what is available from boost ↵ | ROUVREAU Vincent | |
targets | |||
2020-08-26 | Merge pull request #385 from VincentRouvreau/bitmap_polymorphism_issue | Vincent Rouvreau | |
Virtual functions need signatures that exactly match | |||
2020-08-26 | Merge pull request #387 from ↵ | Vincent Rouvreau | |
VincentRouvreau/alpha_complex_3d_does_not_require_eigen Alpha complex 3d does not require eigen | |||
2020-08-25 | Merge pull request #382 from yuichi-ike/weighted_rips | Vincent Rouvreau | |
Documents for weighted Rips | |||
2020-08-25 | Code review: use minimal depth recursively instead of computing dimension on ↵ | ROUVREAU Vincent | |
each loop | |||
2020-08-25 | Code review: min_dim = 0 as default and some doc review | ROUVREAU Vincent | |
2020-08-24 | code review: override and remove inline | ROUVREAU Vincent | |
2020-08-24 | code review: really bad copy/paste... | ROUVREAU Vincent | |
2020-08-24 | code review: call boundary_simplex_range only once | ROUVREAU Vincent | |
2020-08-21 | Merge branch 'master' into alpha_complex_3d_does_not_require_eigen | ROUVREAU Vincent | |
2020-08-21 | Fix compilation issues when cgal but no eigen | ROUVREAU Vincent | |
2020-08-21 | Virtual functions need signatures that exactly match | ROUVREAU Vincent | |
2020-08-21 | Add -DCMAKE_BUILD_TYPE=Release on installation doc | ROUVREAU Vincent | |
2020-08-19 | docs modified | yuichi-ike | |
2020-08-18 | reset_filtration from a dimension (instead of 'until') | ROUVREAU Vincent | |
2020-08-18 | Merge master and resolve conflicts | ROUVREAU Vincent | |
2020-08-18 | Merge master & resolve conflicts | ROUVREAU Vincent | |
2020-08-12 | code review: boundaries uses only once find and return a pair of iterator. ↵ | ROUVREAU Vincent | |
Exception is raised when not found. tested | |||
2020-08-12 | code review: Add test to get boundaries from a vertex | ROUVREAU Vincent | |
2020-08-12 | code review: add a comment about Simplex_tree_boundary_simplex_iterator ↵ | ROUVREAU Vincent | |
default ctor | |||
2020-08-12 | Update src/python/gudhi/simplex_tree.pyx | Vincent Rouvreau | |
Co-authored-by: Marc Glisse <marc.glisse@inria.fr> | |||
2020-08-04 | Fix python alpha complex for conda package | ROUVREAU Vincent | |
2020-08-04 | Remove JAX from the documentation | Marc Glisse | |
jax.grad does not work with our functions (I think it used to work...) | |||
2020-08-04 | fix wasserstein autodiff | MathieuCarriere | |
2020-08-03 | Merge pull request #368 from VincentRouvreau/matplotlib_latex_desactivation | Vincent Rouvreau | |
Add mechanism to deactivate LaTeX matplotlib rendering | |||
2020-08-03 | doc review: Add LaTeX in optional runtime dependencies | ROUVREAU Vincent | |
2020-08-03 | Merge pull request #369 from VincentRouvreau/collapse_edges_stree_python | Vincent Rouvreau | |
collapse edges for python simplex tree |