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2016-03-17Merge from trunk.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1050 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1a32dd3528c771a78d5749ac2c04503a3d979fe4
2016-03-17cleanning up the stuff with iterators in Bitmap_cubical_complex_base.h class. pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1049 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 9630d6df6a2ecdb51ab25150454a563cd928b09a
2016-03-16Compil issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1048 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4fcfc1498408eb98a12ed5d48e620dc38d4c442d
2016-03-16CppCheck and CppLint fixes for alpha complexesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1047 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: a9b42ad2f8751384b5227fa3da8f380cda9b3696
2016-03-15In Delaunay_triangulation_off_io.h, constructing the Triangulation from a ↵vrouvrea
vector of Points is a more efficient way (instead of inserting points on the fly). As consequence, the documentation needs to be rewritten as the points index are changed. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1046 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bdb0196b61418a983cfaf7f6781a3a2906e8b136
2016-03-14Remove temporary get_persistence functionvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1045 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c7503904a243d5f642b9efcbc65df856590e11fc
2016-03-14Remove Options::store_filtration check is true in prune_above_filtration ↵vrouvrea
function in order to let the user empty the tree To empty the tree, call initialize_filtration() and prune_above_filtration(-1) Add a UT to test this case git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1044 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: bb4a916fb547c6312f2138d355903ef87525e9c4
2016-03-14No more use of threshold_ for prune_above_filtration because threshold may ↵vrouvrea
be not up to date git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1043 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b17d8ef63bc173b4c4b6b0bde31f97d85672a754
2016-03-14Answers to Marc's comments.pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1042 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 481841d609bae68df85a93527e6d3cc20f1b06e2
2016-03-14Use GUDHI_CHECK on null_simplex instead of "if"vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1041 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 783218b56e34ef53fbca5bb52e8a467504c0eddc
2016-03-14Boost flat_map erase on an iterator is most efficientvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1040 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1b20d31e129b9aa7f2d884aa935a53959a288650
2016-03-14Alpha complex documentation generated had no scrolling menu for alpha complexesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1039 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 91b8bc91510c4605956682db729f80c03f9b982f
2016-03-11concept and documentationskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1038 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d96a449cd155761d4ae5c61987046733b864e11e
2016-03-11Put the class Witness_complex to private in docskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1037 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 351b135de4d345830ab7fb796eb69b23063fd494
2016-03-09Add of persistence doc image for package overviewvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1036 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ab1ca8902d6e5651cdfd9957d9b261b6874bae8d
2016-03-09Add header and footer to generated documentation in order to fit with the ↵vrouvrea
web site. Add a package overview on top page. Remove text that was redundant with the web site. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Doxygen_for_GUDHI_1.3.0@1035 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 95d6c0e2f0ed8389620c27c03e37d441f93787ee
2016-02-20Details in the doc of alpha-complex.glisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1033 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 7cc1b51ef8e93ee987710a8ea2ed4ac98638f099
2016-02-19Merge last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@1032 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0e5b89e0ea0d69ebfdb74ba3bbf29518f7ce5ce8
2016-02-18The rest of changesskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1031 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: af29326bd4293697211c20001fc120108a38b3f4
2016-02-16Commented is_witness_complex's documentationskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1026 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 912a482e67e92b02a20db1be8b602ff8576632ae
2016-02-16Moved the doc file + changed notations in Witness_complex.hskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1023 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 1053d8ac2f833be8086c81b50dbb34c18de07ebb
2016-02-15typoglisse
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1022 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d6068c0b757949d2e404ba99812ae7a0b8a8908d
2016-02-13removing phat relaed compontns. pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1021 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d0c9c23ca3f3a5b2131179949ba80659b13f7777
2016-02-11now it compiles...skachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1019 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 5b4cd7b1f767b47190a9bf2f6dd7eab2682df6e8
2016-02-11Changed concept's name to CamelCaseskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1018 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ddc6e2d57b2dd547407e42da44868d1d0658e57c
2016-02-11Commited Marc's remarksskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1017 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: d87eb82f60f4f943f59622f33521bcdce7873091
2016-02-11A small change in sphere exampleskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@1015 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4c479a899c1a3686ac53a03affea63bc96208c7c
2016-02-09Finally, let CGAL set the flags, but before setting CXX_FLAGS with "-std=c++11"vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Win64_Boost_Xunit_fix@1011 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: faeca77f4eebf969e608b0c3be67893d646845a9
2016-02-09Adding documentation to the bitmap cubical complex with periodic boundary ↵pdlotko
conditions class. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1010 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: e1d9516f57be5e824203037b74998ed897741261
2016-02-09Doxygen fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1009 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 490dcfd0ca24df97b9bf7735fa167ef844d49b71
2016-02-09adding missing partsypdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1008 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f6de1ee4317763b50233f9a7212bdbf6587ee686
2016-02-08Adding changes suggested by Marc. pdlotko
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1007 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 2462c084e3269a3d44813619f44852d3c8d6e163
2016-02-05Merge of last trunk modificationsvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Win64_Boost_Xunit_fix@1005 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: fd102773dade2672c47e27892782e7b29330f112
2016-02-05Over here I have linkd phat with Gudhi. So far it is done only for cubical ↵pdlotko
complexes, but since I am ONLY using Filtration_simplex_iterator, there should be no problem to have it run with any other class we have. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/bitmap@1004 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: ddb3e2c5fa0c2a816e7435c57d32c0644f8163d2
2016-02-04CMake strategy modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Win64_Boost_Xunit_fix@1003 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c917934525e020b54b2f4506b5c9d060a28c9d89
2016-02-04requires boost alsovrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Win64_Boost_Xunit_fix@1001 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aca5ee1d5587d2e613691a539bb166ac592c137c
2016-02-04test with include CGAL_USE_FILE to fix windows issuevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Win64_Boost_Xunit_fix@1000 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 11a5fb78933306cfc83951174b38a03837fef58a
2016-02-03it is a simplex and not a simplex handlevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@999 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4bfc8fe6051480854acbd68fdb5c6f09624aa3da
2016-02-03Mentionning Delaunay complex in Alpha complex documentation (user and reference)vrouvrea
Specifying Alpha complex Kernel must be an Epick_d dD kernel (user and reference) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@998 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: b1a7a0cadd236bbfa6c529f2979ad2096414e207
2016-02-03make_filtration_non_decreasing and rec_make_filtration_non_decreasing must ↵vrouvrea
go through the tree in reverse mode (starting from the right part) git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@997 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 0c8f8aeabd7dcba26971381c425ef7b0b417138c
2016-02-03Merge of AddressSanitizer bug fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/trunk@996 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 20e4b949af8e4481c13e8a91181fe772c696f01a
2016-02-02alpha off reader test strategy modificationvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@995 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: aa4ba97eecefb03e01a53ae1e2b50248a0857043
2016-02-02landmark choice functions are now staticskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@994 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: f83d337feab944e2c823b8e127f1a8d612d0a1bd
2016-02-02Make example for doc shorter. Include strategy reviewalvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@992 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 23d3e71d7d0fb4d649f73e53959626c5cbb0acd8
2016-02-02rename alpha_shapes_persistence test with alpha_complex_3d_persistencevrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/alphashapes@991 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 455ee94450098bbcc000fb2ab2c4d39a326dea2c
2016-01-31remove creation of useless visitor for test that were just used for displaysalinasd
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/ST_insert_with_subfaces_fix@990 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 13b3baec7f449d1d74cfaca2211571b468be1486
2016-01-21Warning fix - if not BOOST_CHECK, variable b_print_output seen as not used.vrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/VR_witness@986 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 171f360b478c98edd9e177808e2c0b8410bfbd37
2016-01-21cpplint/cppcheck fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/VR_witness@985 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 4dc15b3ab0eecb8d4f5bbb1ac1cb9dabf95233e4
2016-01-21cpplint fixesvrouvrea
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/VR_witness@984 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: c663c383e09719a8c70c1100bb6e21d8fc49e597
2016-01-20Almost all Vincent's remarksskachano
git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/witness@982 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 32564e3521e0807e26bd2c07d682751a3d47e6da
generated by cgit v1.2.3 (git 2.39.1) at 2024-07-04 14:46:57 +0000