From 7ea58c3ab5543c4a04638690eaebe1591ca47215 Mon Sep 17 00:00:00 2001
From: mcarrier <mcarrier@636b058d-ea47-450e-bf9e-a15bfbe3eedb>
Date: Fri, 28 Jul 2017 14:36:36 +0000
Subject: git-svn-id:
 svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/Nerve_GIC@2599
 636b058d-ea47-450e-bf9e-a15bfbe3eedb

Former-commit-id: 2cb3c43b09c2345a7671bdf48be5b90ed3e22ff8
---
 src/Nerve_GIC/example/CMakeLists.txt               |  2 +-
 .../example/KeplerMapperVisuFromTxtFile.py         | 44 ++++++++++++++++++++++
 src/Nerve_GIC/example/visu.py                      | 44 ----------------------
 3 files changed, 45 insertions(+), 45 deletions(-)
 create mode 100755 src/Nerve_GIC/example/KeplerMapperVisuFromTxtFile.py
 delete mode 100755 src/Nerve_GIC/example/visu.py

(limited to 'src/Nerve_GIC')

diff --git a/src/Nerve_GIC/example/CMakeLists.txt b/src/Nerve_GIC/example/CMakeLists.txt
index b2c501c3..ea504c11 100644
--- a/src/Nerve_GIC/example/CMakeLists.txt
+++ b/src/Nerve_GIC/example/CMakeLists.txt
@@ -16,7 +16,7 @@ target_link_libraries(MapperDeltaFunc  ${Boost_SYSTEM_LIBRARY})
 add_executable ( GICvoronoi GICvoronoi.cpp )
 target_link_libraries(MapperDeltaFunc  ${Boost_SYSTEM_LIBRARY})
 
-file(COPY visu.py km.py DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
+file(COPY KeplerMapperVisuFromTxtFile.py km.py DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/)
 
 if (TBB_FOUND)
   target_link_libraries(Nerve ${TBB_LIBRARIES})
diff --git a/src/Nerve_GIC/example/KeplerMapperVisuFromTxtFile.py b/src/Nerve_GIC/example/KeplerMapperVisuFromTxtFile.py
new file mode 100755
index 00000000..06d22abd
--- /dev/null
+++ b/src/Nerve_GIC/example/KeplerMapperVisuFromTxtFile.py
@@ -0,0 +1,44 @@
+import km
+import numpy as np
+from collections import defaultdict
+
+network = {}
+mapper = km.KeplerMapper(verbose=0)
+data = np.zeros((3,3))
+projected_data = mapper.fit_transform( data, projection="sum", scaler=None )
+
+f = open('SC.txt','r')
+nodes = defaultdict(list)
+links = defaultdict(list)
+custom = defaultdict(list)
+
+dat = f.readline()
+lens = f.readline()
+color = f.readline();
+param = [float(i) for i in f.readline().split(" ")]
+
+nums = [int(i) for i in f.readline().split(" ")]
+num_nodes = nums[0]
+num_edges = nums[1]
+
+for i in range(0,num_nodes):
+	point = [float(j) for j in f.readline().split(" ")]
+	nodes[  str(int(point[0]))  ] = [  int(point[0]), point[1], int(point[2])  ]
+	links[  str(int(point[0]))  ] = []
+	custom[  int(point[0])  ] = point[1]
+
+m = min([custom[i] for i in range(0,num_nodes)])
+M = max([custom[i] for i in range(0,num_nodes)])
+
+for i in range(0,num_edges):
+	edge = [int(j) for j in f.readline().split(" ")]	
+	links[  str(edge[0])  ].append(  str(edge[1])  )	
+	links[  str(edge[1])  ].append(  str(edge[0])  )
+
+network["nodes"] = nodes
+network["links"] = links
+network["meta"] = lens
+
+mapper.visualize(network, color_function = color, path_html="SC.html", title=dat,
+graph_link_distance=30, graph_gravity=0.1, graph_charge=-120, custom_tooltips=custom, width_html=0, 
+height_html=0, show_tooltips=True, show_title=True, show_meta=True, res=param[0],gain=param[1], minimum=m,maximum=M)
\ No newline at end of file
diff --git a/src/Nerve_GIC/example/visu.py b/src/Nerve_GIC/example/visu.py
deleted file mode 100755
index 06d22abd..00000000
--- a/src/Nerve_GIC/example/visu.py
+++ /dev/null
@@ -1,44 +0,0 @@
-import km
-import numpy as np
-from collections import defaultdict
-
-network = {}
-mapper = km.KeplerMapper(verbose=0)
-data = np.zeros((3,3))
-projected_data = mapper.fit_transform( data, projection="sum", scaler=None )
-
-f = open('SC.txt','r')
-nodes = defaultdict(list)
-links = defaultdict(list)
-custom = defaultdict(list)
-
-dat = f.readline()
-lens = f.readline()
-color = f.readline();
-param = [float(i) for i in f.readline().split(" ")]
-
-nums = [int(i) for i in f.readline().split(" ")]
-num_nodes = nums[0]
-num_edges = nums[1]
-
-for i in range(0,num_nodes):
-	point = [float(j) for j in f.readline().split(" ")]
-	nodes[  str(int(point[0]))  ] = [  int(point[0]), point[1], int(point[2])  ]
-	links[  str(int(point[0]))  ] = []
-	custom[  int(point[0])  ] = point[1]
-
-m = min([custom[i] for i in range(0,num_nodes)])
-M = max([custom[i] for i in range(0,num_nodes)])
-
-for i in range(0,num_edges):
-	edge = [int(j) for j in f.readline().split(" ")]	
-	links[  str(edge[0])  ].append(  str(edge[1])  )	
-	links[  str(edge[1])  ].append(  str(edge[0])  )
-
-network["nodes"] = nodes
-network["links"] = links
-network["meta"] = lens
-
-mapper.visualize(network, color_function = color, path_html="SC.html", title=dat,
-graph_link_distance=30, graph_gravity=0.1, graph_charge=-120, custom_tooltips=custom, width_html=0, 
-height_html=0, show_tooltips=True, show_title=True, show_meta=True, res=param[0],gain=param[1], minimum=m,maximum=M)
\ No newline at end of file
-- 
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