From 4832d865981bb74c8afc7240e953adc8f54c52b0 Mon Sep 17 00:00:00 2001 From: vrouvrea Date: Thu, 6 Jul 2017 15:38:44 +0000 Subject: Plot functions now returns a plot that can be modified before to be shown Add confidence band in plot_persistence_diagram Cythonization of read_lower_triangular_matrix_from_csv_file and read_persistence_intervals functions Add Python tests of read functions git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/persistence_diagram_improvement@2590 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 522ec31e9ad3a9a688875612d246114704b8c74e --- ...dean_witness_complex_diagram_persistence_from_off_file_example.py | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) (limited to 'src/cython/example/euclidean_witness_complex_diagram_persistence_from_off_file_example.py') diff --git a/src/cython/example/euclidean_witness_complex_diagram_persistence_from_off_file_example.py b/src/cython/example/euclidean_witness_complex_diagram_persistence_from_off_file_example.py index 5748aa8a..c236d992 100755 --- a/src/cython/example/euclidean_witness_complex_diagram_persistence_from_off_file_example.py +++ b/src/cython/example/euclidean_witness_complex_diagram_persistence_from_off_file_example.py @@ -40,6 +40,7 @@ parser.add_argument("-f", "--file", type=str, required=True) parser.add_argument("-a", "--max_alpha_square", type=float, required=True) parser.add_argument("-n", "--number_of_landmarks", type=int, required=True) parser.add_argument("-d", "--limit_dimension", type=int, required=True) +parser.add_argument("-b", "--band_boot", type=float, default=0.) parser.add_argument('--no-diagram', default=False, action='store_true' , help='Flag for not to display the diagrams') args = parser.parse_args() @@ -70,8 +71,8 @@ with open(args.file, 'r') as f: print(simplex_tree.betti_numbers()) if args.no_diagram == False: - gudhi.plot_persistence_diagram(diag) - + pplot = gudhi.plot_persistence_diagram(diag, band_boot=args.band_boot) + pplot.show() else: print(args.file, "is not a valid OFF file") -- cgit v1.2.3