From f5c97bc9fd1c247045d35ddf261f9afe4d024406 Mon Sep 17 00:00:00 2001 From: glisse Date: Fri, 20 Jul 2018 15:03:46 +0000 Subject: First try at interfacing the sparse rips in python. Needs at least documentation and tests. git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-python@3697 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 75bef59e90355853ee24807ca7453c4bb0a38f43 --- src/cython/test/test_rips_complex.py | 1 - 1 file changed, 1 deletion(-) (limited to 'src/cython/test') diff --git a/src/cython/test/test_rips_complex.py b/src/cython/test/test_rips_complex.py index c37b5400..2eb1c61c 100755 --- a/src/cython/test/test_rips_complex.py +++ b/src/cython/test/test_rips_complex.py @@ -30,7 +30,6 @@ __license__ = "GPL v3" def test_empty_rips(): rips_complex = RipsComplex() - assert rips_complex.__is_defined() == True def test_rips_from_points(): point_list = [[0, 0], [1, 0], [0, 1], [1, 1]] -- cgit v1.2.3 From 629a456684e9bbf4c2ef5dbfefebe85e9c04a39d Mon Sep 17 00:00:00 2001 From: glisse Date: Mon, 10 Sep 2018 09:23:07 +0000 Subject: Add minimal testing for sparse rips in python git-svn-id: svn+ssh://scm.gforge.inria.fr/svnroot/gudhi/branches/sparserips-python@3879 636b058d-ea47-450e-bf9e-a15bfbe3eedb Former-commit-id: 14cde17f1ef634539937b215e82bcfe3c8c784f0 --- src/cython/test/test_rips_complex.py | 12 ++++++++++++ 1 file changed, 12 insertions(+) (limited to 'src/cython/test') diff --git a/src/cython/test/test_rips_complex.py b/src/cython/test/test_rips_complex.py index 2eb1c61c..73cdac17 100755 --- a/src/cython/test/test_rips_complex.py +++ b/src/cython/test/test_rips_complex.py @@ -67,6 +67,18 @@ def test_filtered_rips_from_points(): assert simplex_tree.num_simplices() == 8 assert simplex_tree.num_vertices() == 4 +def test_sparse_filtered_rips_from_points(): + point_list = [[0, 0], [1, 0], [0, 1], [1, 1]] + filtered_rips = RipsComplex(points=point_list, max_edge_length=1.0, sparse=.001) + + simplex_tree = filtered_rips.create_simplex_tree(max_dimension=1) + + assert simplex_tree.__is_defined() == True + assert simplex_tree.__is_persistence_defined() == False + + assert simplex_tree.num_simplices() == 8 + assert simplex_tree.num_vertices() == 4 + def test_rips_from_distance_matrix(): distance_matrix = [[0], [1, 0], -- cgit v1.2.3