""" This file is part of the Gudhi Library - https://gudhi.inria.fr/ - which is released under MIT. See file LICENSE or go to https://gudhi.inria.fr/licensing/ for full license details. Author(s): Yuichi Ike Copyright (C) 2020 Inria Modification(s): - YYYY/MM Author: Description of the modification """ from gudhi.weighted_rips_complex import WeightedRipsComplex from gudhi.point_cloud.dtm import DTM import numpy from scipy.spatial.distance import cdist import pytest def test_dtm_rips_complex(): pts = numpy.array([[2.0, 2], [0, 1], [3, 4]]) dist = cdist(pts,pts) dtm = DTM(2, q=2, metric="precomputed") r = dtm.fit_transform(dist) w_rips = WeightedRipsComplex(distance_mattix=dist, filtration_values=r) st = w_rips.create_simplex_tree(max_dimension=2) diag = st.persistence() assert diag == [(0, (1.5811388300841898, float("inf"))), (0, (1.5811388300841898, 2.699172818834085)), (0, (1.5811388300841898, 2.699172818834085))]