blob: 23f7ece68577a1f10f99ed67931b4a824a8593df (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
|
#!/usr/bin/env python
import gudhi
import numpy
import argparse
import operator
import os
"""This file is part of the Gudhi Library. The Gudhi library
(Geometric Understanding in Higher Dimensions) is a generic C++
library for computational topology.
Author(s): Vincent Rouvreau
Copyright (C) 2016 INRIA
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
"""
__author__ = "Vincent Rouvreau"
__copyright__ = "Copyright (C) 2016 INRIA"
__license__ = "GPL v3"
parser = argparse.ArgumentParser(description='Cubical complex from a perseus'
'file style name.',
epilog='Example: '
'./cubical_complex_from_perseus_file_example.py'
' -f ../data/bitmap/CubicalTwoSphere.txt')
parser.add_argument("-f", "--file", type=str, required=True)
args = parser.parse_args()
if os.access(args.file, os.R_OK):
print("#####################################################################")
print("CubicalComplex creation")
cubical_complex = gudhi.CubicalComplex(perseus_file=args.file)
print("persistence(homology_coeff_field=2, min_persistence=0)=")
print(cubical_complex.persistence(homology_coeff_field=2, min_persistence=0))
print("betti_numbers()=")
print(cubical_complex.betti_numbers())
else:
print(args.file, "is unreachable")
|
