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authorMarc Glisse <marc.glisse@inria.fr>2022-10-15 01:18:56 +0200
committerMarc Glisse <marc.glisse@inria.fr>2022-10-15 01:18:56 +0200
commite94e490554ce56040b998893977255a704d35e59 (patch)
tree397647a89098b4d65ea6dca146e45bfb1c7cbedf
parent524718d63a8f633dbcc4fe7db3fe920ebd7e972c (diff)
Fix badly centered barcode
-rw-r--r--src/python/gudhi/persistence_graphical_tools.py8
1 files changed, 5 insertions, 3 deletions
diff --git a/src/python/gudhi/persistence_graphical_tools.py b/src/python/gudhi/persistence_graphical_tools.py
index 21275cdd..e438aa66 100644
--- a/src/python/gudhi/persistence_graphical_tools.py
+++ b/src/python/gudhi/persistence_graphical_tools.py
@@ -194,19 +194,21 @@ def plot_persistence_barcode(
y=[(death - birth) if death != float("inf") else (infinity - birth) for (dim,(birth,death)) in persistence]
c=[colormap[dim] for (dim,(birth,death)) in persistence]
- axes.barh(list(reversed(range(len(x)))), y, height=0.8, left=x, alpha=alpha, color=c, linewidth=0)
+ axes.barh(range(len(x)), y, left=x, alpha=alpha, color=c, linewidth=0)
if legend:
- dimensions = list(set(item[0] for item in persistence))
+ dimensions = set(item[0] for item in persistence)
axes.legend(
handles=[mpatches.Patch(color=colormap[dim], label=str(dim)) for dim in dimensions], loc="lower right",
)
axes.set_title("Persistence barcode", fontsize=fontsize)
+ axes.set_yticks([])
+ axes.invert_yaxis()
# Ends plot on infinity value and starts a little bit before min_birth
if len(x) != 0:
- axes.axis([axis_start, infinity, 0, len(x)])
+ axes.set_xlim((axis_start, infinity))
return axes
except ImportError as import_error: