summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorGard Spreemann <gspreemann@gmail.com>2018-03-11 18:13:21 +0100
committerGard Spreemann <gspreemann@gmail.com>2018-03-11 18:13:21 +0100
commit41a1b8c2728e212c832c0384c8bb424139a247cf (patch)
tree226a1b466af789b259228b31646dbfbaa23e6dc4
parent8e51c74d8855a641c006765ee246402e218828f3 (diff)
Remove CGAL patches so as not to complicate copyright information.
-rw-r--r--include/gudhi_patches/CGAL/Convex_hull.h56
-rw-r--r--include/gudhi_patches/CGAL/Delaunay_triangulation.h933
-rw-r--r--include/gudhi_patches/CGAL/Epeck_d.h53
-rw-r--r--include/gudhi_patches/CGAL/Epick_d.h71
-rw-r--r--include/gudhi_patches/CGAL/IO/Triangulation_off_ostream.h320
-rw-r--r--include/gudhi_patches/CGAL/Kd_tree.h582
-rw-r--r--include/gudhi_patches/CGAL/Kd_tree_node.h586
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_LA_base.h177
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_LA_functors.h344
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_base.h40
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_change_FT.h117
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_complete.h33
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_filter_K.h79
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_filter_NT.h93
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_per_dimension.h33
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Cartesian_static_filters.h95
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Coaffine.h330
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Define_kernel_types.h50
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Dimension_base.h49
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Filtered_predicate2.h137
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/KernelD_converter.h199
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Kernel_2_interface.h104
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Kernel_3_interface.h102
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Kernel_d_interface.h298
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Kernel_object_converter.h134
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/LA_eigen/LA.h175
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/LA_eigen/constructors.h162
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Lazy_cartesian.h188
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Types/Aff_transformation.h59
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Types/Hyperplane.h159
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Types/Iso_box.h88
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Types/Line.h66
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Types/Ray.h66
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Types/Segment.h121
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Types/Sphere.h132
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Types/Weighted_point.h205
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/array.h165
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/avx4.h213
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_iterator_to_vectors.h76
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_points.h211
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_vectors_from_vectors.h201
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_points_from_vectors.h164
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim.h58
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim_internal.h164
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/mix.h46
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/sse2.h145
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/v2int.h181
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Vector/vector.h167
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Cartesian_wrap.h305
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Hyperplane_d.h131
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Point_d.h284
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Ref_count_obj.h120
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Segment_d.h133
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Sphere_d.h130
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Vector_d.h266
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Weighted_point_d.h129
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/function_objects_cartesian.h1355
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/functor_properties.h40
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/functor_tags.h363
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/static_int.h61
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/store_kernel.h104
-rw-r--r--include/gudhi_patches/CGAL/NewKernel_d/utils.h306
-rw-r--r--include/gudhi_patches/CGAL/Orthogonal_incremental_neighbor_search.h620
-rw-r--r--include/gudhi_patches/CGAL/Regular_triangulation.h1169
-rw-r--r--include/gudhi_patches/CGAL/Regular_triangulation_traits_adapter.h288
-rw-r--r--include/gudhi_patches/CGAL/TDS_full_cell_default_storage_policy.h99
-rw-r--r--include/gudhi_patches/CGAL/TDS_full_cell_mirror_storage_policy.h71
-rw-r--r--include/gudhi_patches/CGAL/Triangulation.h1424
-rw-r--r--include/gudhi_patches/CGAL/Triangulation_data_structure.h1603
-rw-r--r--include/gudhi_patches/CGAL/Triangulation_ds_full_cell.h311
-rw-r--r--include/gudhi_patches/CGAL/Triangulation_ds_vertex.h154
-rw-r--r--include/gudhi_patches/CGAL/Triangulation_face.h111
-rw-r--r--include/gudhi_patches/CGAL/Triangulation_full_cell.h148
-rw-r--r--include/gudhi_patches/CGAL/Triangulation_vertex.h128
-rw-r--r--include/gudhi_patches/CGAL/argument_swaps.h88
-rw-r--r--include/gudhi_patches/CGAL/determinant_of_vectors.h117
-rw-r--r--include/gudhi_patches/CGAL/internal/Combination_enumerator.h148
-rw-r--r--include/gudhi_patches/CGAL/internal/Static_or_dynamic_array.h116
-rw-r--r--include/gudhi_patches/CGAL/internal/Triangulation/Dummy_TDS.h49
-rw-r--r--include/gudhi_patches/CGAL/internal/Triangulation/Triangulation_ds_iterators.h154
-rw-r--r--include/gudhi_patches/CGAL/internal/Triangulation/utilities.h154
-rw-r--r--include/gudhi_patches/CGAL/iterator_from_indices.h75
-rw-r--r--include/gudhi_patches/CGAL/transforming_iterator.h123
-rw-r--r--include/gudhi_patches/CGAL/transforming_pair_iterator.h127
-rw-r--r--include/gudhi_patches/CGAL/typeset.h117
85 files changed, 0 insertions, 19348 deletions
diff --git a/include/gudhi_patches/CGAL/Convex_hull.h b/include/gudhi_patches/CGAL/Convex_hull.h
deleted file mode 100644
index a8f91bf8..00000000
--- a/include/gudhi_patches/CGAL/Convex_hull.h
+++ /dev/null
@@ -1,56 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-/* RANDOM DESIGN IDEAS:
-- Use a policy tag to choose for incremental with inserts only or
- incremental with removals and inserts.
- In the first case: use Triangulation for storage.
- In the second case: use Delaunay !
- In this second case, we must keeps the points that are inserted in the hull,
- as they may become part of the boundary later on, when some points are removed.
-- Constructor with range argument uses quickhull.
-*/
-
-#ifndef CGAL_CONVEX_HULL_H
-#define CGAL_CONVEX_HULL_H
-
-namespace CGAL {
-
-template < class CHTraits, class TDS_ = Default >
-class Convex_hull
-{
- typedef typename Maximal_dimension<typename CHTraits::Point_d>::type
- Maximal_dimension_;
- typedef typename Default::Get<TDS_, Triangulation_data_structure
- < Maximal_dimension_,
- Triangulation_vertex<CHTraits>,
- Triangulation_full_cell<CHTraits> >
- >::type TDS;
- typedef Convex_hull<CHTraits, TDS_> Self;
-
- typedef typename CHTraits::Coaffine_orientation_d
- Coaffine_orientation_d;
- typedef typename CHTraits::Orientation_d Orientation_d;
-
-public:
-};
-
-} //namespace CGAL
-
-#endif // CGAL_CONVEX_HULL_H
diff --git a/include/gudhi_patches/CGAL/Delaunay_triangulation.h b/include/gudhi_patches/CGAL/Delaunay_triangulation.h
deleted file mode 100644
index 071cd184..00000000
--- a/include/gudhi_patches/CGAL/Delaunay_triangulation.h
+++ /dev/null
@@ -1,933 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_DELAUNAY_COMPLEX_H
-#define CGAL_DELAUNAY_COMPLEX_H
-
-#include <CGAL/tss.h>
-#include <CGAL/Triangulation.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/Default.h>
-
-#include <boost/iterator/transform_iterator.hpp>
-
-#include <algorithm>
-
-namespace CGAL {
-
-template< typename DCTraits, typename _TDS = Default >
-class Delaunay_triangulation
-: public Triangulation<DCTraits,
- typename Default::Get<_TDS, Triangulation_data_structure<
- typename DCTraits::Dimension,
- Triangulation_vertex<DCTraits>,
- Triangulation_full_cell<DCTraits> >
- >::type >
-{
- typedef typename DCTraits::Dimension Maximal_dimension_;
- typedef typename Default::Get<_TDS, Triangulation_data_structure<
- Maximal_dimension_,
- Triangulation_vertex<DCTraits>,
- Triangulation_full_cell<DCTraits> >
- >::type TDS;
- typedef Triangulation<DCTraits, TDS> Base;
- typedef Delaunay_triangulation<DCTraits, _TDS> Self;
-
- typedef typename DCTraits::Side_of_oriented_sphere_d
- Side_of_oriented_sphere_d;
- typedef typename DCTraits::Orientation_d Orientation_d;
-
-public: // PUBLIC NESTED TYPES
-
- typedef DCTraits Geom_traits;
- typedef typename Base::Triangulation_ds Triangulation_ds;
-
- typedef typename Base::Vertex Vertex;
- typedef typename Base::Full_cell Full_cell;
- typedef typename Base::Facet Facet;
- typedef typename Base::Face Face;
-
- typedef typename Base::Maximal_dimension Maximal_dimension;
- typedef typename DCTraits::Point_d Point;
- typedef typename DCTraits::Point_d Point_d;
-
- typedef typename Base::Vertex_handle Vertex_handle;
- typedef typename Base::Vertex_iterator Vertex_iterator;
- typedef typename Base::Vertex_const_handle Vertex_const_handle;
- typedef typename Base::Vertex_const_iterator Vertex_const_iterator;
-
- typedef typename Base::Full_cell_handle Full_cell_handle;
- typedef typename Base::Full_cell_iterator Full_cell_iterator;
- typedef typename Base::Full_cell_const_handle Full_cell_const_handle;
- typedef typename Base::Full_cell_const_iterator Full_cell_const_iterator;
- typedef typename Base::Finite_full_cell_const_iterator
- Finite_full_cell_const_iterator;
-
- typedef typename Base::size_type size_type;
- typedef typename Base::difference_type difference_type;
-
- typedef typename Base::Locate_type Locate_type;
-
- //Tag to distinguish triangulations with weighted_points
- typedef Tag_false Weighted_tag;
-
-protected: // DATA MEMBERS
-
-
-public:
-
- using typename Base::Rotor;
- using Base::maximal_dimension;
- using Base::are_incident_full_cells_valid;
- using Base::coaffine_orientation_predicate;
- using Base::reset_flat_orientation;
- using Base::current_dimension;
- //using Base::star;
- //using Base::incident_full_cells;
- using Base::geom_traits;
- using Base::index_of_covertex;
- //using Base::index_of_second_covertex;
- using Base::infinite_vertex;
- using Base::rotate_rotor;
- using Base::insert_in_hole;
- using Base::insert_outside_convex_hull_1;
- using Base::is_infinite;
- using Base::locate;
- using Base::points_begin;
- using Base::set_neighbors;
- using Base::new_full_cell;
- using Base::number_of_vertices;
- using Base::orientation;
- using Base::tds;
- using Base::reorient_full_cells;
- using Base::full_cell;
- using Base::full_cells_begin;
- using Base::full_cells_end;
- using Base::finite_full_cells_begin;
- using Base::finite_full_cells_end;
- using Base::vertices_begin;
- using Base::vertices_end;
- // using Base::
-
-private:
- //*** Side_of_oriented_subsphere_d ***
- typedef typename Base::Flat_orientation_d Flat_orientation_d;
- typedef typename Base::Construct_flat_orientation_d Construct_flat_orientation_d;
- typedef typename DCTraits::In_flat_side_of_oriented_sphere_d In_flat_side_of_oriented_sphere_d;
- // Wrapper
- struct Side_of_oriented_subsphere_d
- {
- boost::optional<Flat_orientation_d>* fop;
- Construct_flat_orientation_d cfo;
- In_flat_side_of_oriented_sphere_d ifsoos;
-
- Side_of_oriented_subsphere_d(
- boost::optional<Flat_orientation_d>& x,
- Construct_flat_orientation_d const&y,
- In_flat_side_of_oriented_sphere_d const&z)
- : fop(&x), cfo(y), ifsoos(z) {}
-
- template<class Iter>
- CGAL::Orientation operator()(Iter a, Iter b, const Point & p)const
- {
- if(!*fop)
- *fop=cfo(a,b);
- return ifsoos(fop->get(),a,b,p);
- }
- };
-public:
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - CREATION / CONSTRUCTORS
-
- Delaunay_triangulation(int dim, const Geom_traits &k = Geom_traits())
- : Base(dim, k)
- {
- }
-
- // With this constructor,
- // the user can specify a Flat_orientation_d object to be used for
- // orienting simplices of a specific dimension
- // (= preset_flat_orientation_.first)
- // It it used by the dark triangulations created by DT::remove
- Delaunay_triangulation(
- int dim,
- const std::pair<int, const Flat_orientation_d *> &preset_flat_orientation,
- const Geom_traits &k = Geom_traits())
- : Base(dim, preset_flat_orientation, k)
- {
- }
-
- ~Delaunay_triangulation() {}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ACCESS
-
- // Not Documented
- Side_of_oriented_subsphere_d side_of_oriented_subsphere_predicate() const
- {
- return Side_of_oriented_subsphere_d (
- flat_orientation_,
- geom_traits().construct_flat_orientation_d_object(),
- geom_traits().in_flat_side_of_oriented_sphere_d_object()
- );
- }
-
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - REMOVALS
-
- Full_cell_handle remove(Vertex_handle);
- Full_cell_handle remove(const Point & p, Full_cell_handle hint = Full_cell_handle())
- {
- Locate_type lt;
- Face f(maximal_dimension());
- Facet ft;
- Full_cell_handle s = locate(p, lt, f, ft, hint);
- if( Base::ON_VERTEX == lt )
- {
- return remove(s->vertex(f.index(0)));
- }
- return Full_cell_handle();
- }
-
- template< typename ForwardIterator >
- void remove(ForwardIterator start, ForwardIterator end)
- {
- while( start != end )
- remove(*start++);
- }
-
- // Not documented
- void remove_decrease_dimension(Vertex_handle);
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - INSERTIONS
-
- template< typename ForwardIterator >
- size_type insert(ForwardIterator start, ForwardIterator end)
- {
- size_type n = number_of_vertices();
- std::vector<Point> points(start, end);
- spatial_sort(points.begin(), points.end(), geom_traits());
- Full_cell_handle hint;
- for( typename std::vector<Point>::const_iterator p = points.begin(); p != points.end(); ++p )
- {
- hint = insert(*p, hint)->full_cell();
- }
- return number_of_vertices() - n;
- }
- Vertex_handle insert(const Point &, Locate_type, const Face &, const Facet &, Full_cell_handle);
- Vertex_handle insert(const Point & p, Full_cell_handle start = Full_cell_handle())
- {
- Locate_type lt;
- Face f(maximal_dimension());
- Facet ft;
- Full_cell_handle s = locate(p, lt, f, ft, start);
- return insert(p, lt, f, ft, s);
- }
- Vertex_handle insert(const Point & p, Vertex_handle hint)
- {
- CGAL_assertion( Vertex_handle() != hint );
- return insert(p, hint->full_cell());
- }
- Vertex_handle insert_outside_affine_hull(const Point &);
- Vertex_handle insert_in_conflicting_cell(const Point &, Full_cell_handle);
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - GATHERING CONFLICTING SIMPLICES
-
- bool is_in_conflict(const Point &, Full_cell_const_handle) const;
- template< class OrientationPredicate >
- Oriented_side perturbed_side_of_positive_sphere(const Point &,
- Full_cell_const_handle, const OrientationPredicate &) const;
-
- template< typename OutputIterator >
- Facet compute_conflict_zone(const Point &, Full_cell_handle, OutputIterator) const;
-
- template < typename OrientationPredicate, typename SideOfOrientedSpherePredicate >
- class Conflict_predicate
- {
- const Self & dc_;
- const Point & p_;
- OrientationPredicate ori_;
- SideOfOrientedSpherePredicate side_of_s_;
- int cur_dim_;
- public:
- Conflict_predicate(
- const Self & dc,
- const Point & p,
- const OrientationPredicate & ori,
- const SideOfOrientedSpherePredicate & side)
- : dc_(dc), p_(p), ori_(ori), side_of_s_(side), cur_dim_(dc.current_dimension()) {}
-
- inline
- bool operator()(Full_cell_const_handle s) const
- {
- bool ok;
- if( ! dc_.is_infinite(s) )
- {
- Oriented_side side = side_of_s_(dc_.points_begin(s), dc_.points_begin(s) + cur_dim_ + 1, p_);
- if( ON_POSITIVE_SIDE == side )
- ok = true;
- else if( ON_NEGATIVE_SIDE == side )
- ok = false;
- else
- ok = ON_POSITIVE_SIDE == dc_.perturbed_side_of_positive_sphere<OrientationPredicate>(p_, s, ori_);
- }
- else
- {
- typedef typename Full_cell::Vertex_handle_const_iterator VHCI;
- typedef Substitute_point_in_vertex_iterator<VHCI> F;
- F spivi(dc_.infinite_vertex(), &p_);
-
- Orientation o = ori_(
- boost::make_transform_iterator(s->vertices_begin(), spivi),
- boost::make_transform_iterator(s->vertices_begin() + cur_dim_ + 1,
- spivi));
-
- if( POSITIVE == o )
- ok = true;
- else if( o == NEGATIVE )
- ok = false;
- else
- ok = (*this)(s->neighbor( s->index( dc_.infinite_vertex() ) ));
- }
- return ok;
- }
- };
-
- template < typename ConflictPredicate >
- class Conflict_traversal_predicate
- {
- const Self & dc_;
- const ConflictPredicate & pred_;
- public:
- Conflict_traversal_predicate(const Self & dc, const ConflictPredicate & pred)
- : dc_(dc), pred_(pred)
- {}
- inline
- bool operator()(const Facet & f) const
- {
- return pred_(dc_.full_cell(f)->neighbor(dc_.index_of_covertex(f)));
- }
- };
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - VALIDITY
-
- bool is_valid(bool verbose = false, int level = 0) const;
-
-private:
- // Some internal types to shorten notation
- typedef typename Base::Coaffine_orientation_d Coaffine_orientation_d;
- using Base::flat_orientation_;
- typedef Conflict_predicate<Coaffine_orientation_d, Side_of_oriented_subsphere_d>
- Conflict_pred_in_subspace;
- typedef Conflict_predicate<Orientation_d, Side_of_oriented_sphere_d>
- Conflict_pred_in_fullspace;
- typedef Conflict_traversal_predicate<Conflict_pred_in_subspace>
- Conflict_traversal_pred_in_subspace;
- typedef Conflict_traversal_predicate<Conflict_pred_in_fullspace>
- Conflict_traversal_pred_in_fullspace;
-};
-
-// = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
-// FUNCTIONS THAT ARE MEMBER METHODS:
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - REMOVALS
-
-template< typename DCTraits, typename TDS >
-typename Delaunay_triangulation<DCTraits, TDS>::Full_cell_handle
-Delaunay_triangulation<DCTraits, TDS>
-::remove( Vertex_handle v )
-{
- CGAL_precondition( ! is_infinite(v) );
- CGAL_expensive_precondition( is_vertex(v) );
-
- // THE CASE cur_dim == 0
- if( 0 == current_dimension() )
- {
- remove_decrease_dimension(v);
- return Full_cell_handle();
- }
- else if( 1 == current_dimension() )
- { // THE CASE cur_dim == 1
- if( 2 == number_of_vertices() )
- {
- remove_decrease_dimension(v);
- return Full_cell_handle();
- }
- Full_cell_handle left = v->full_cell();
- if( 0 == left->index(v) )
- left = left->neighbor(1);
- CGAL_assertion( 1 == left->index(v) );
- Full_cell_handle right = left->neighbor(0);
-
- tds().associate_vertex_with_full_cell(left, 1, right->vertex(1));
- set_neighbors(left, 0, right->neighbor(0), right->mirror_index(0));
-
- tds().delete_vertex(v);
- tds().delete_full_cell(right);
- return left;
- }
-
- // THE CASE cur_dim >= 2
- // Gather the finite vertices sharing an edge with |v|
- typedef typename Base::template Full_cell_set<Full_cell_handle> Simplices;
- Simplices simps;
- std::back_insert_iterator<Simplices> out(simps);
- tds().incident_full_cells(v, out);
- typedef std::set<Vertex_handle> Vertex_set;
- Vertex_set verts;
- Vertex_handle vh;
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- for( int i = 0; i <= current_dimension(); ++i )
- {
- vh = (*it)->vertex(i);
- if( is_infinite(vh) )
- continue;
- if( vh == v )
- continue;
- verts.insert(vh);
- }
-
- // After gathering finite neighboring vertices, create their Dark Delaunay triangulation
- typedef Triangulation_vertex<Geom_traits, Vertex_handle> Dark_vertex_base;
- typedef Triangulation_full_cell<Geom_traits,
- internal::Triangulation::Dark_full_cell_data<Self> > Dark_full_cell_base;
- typedef Triangulation_data_structure<Maximal_dimension, Dark_vertex_base, Dark_full_cell_base> Dark_tds;
- typedef Delaunay_triangulation<DCTraits, Dark_tds> Dark_triangulation;
- typedef typename Dark_triangulation::Face Dark_face;
- typedef typename Dark_triangulation::Facet Dark_facet;
- typedef typename Dark_triangulation::Vertex_handle Dark_v_handle;
- typedef typename Dark_triangulation::Full_cell_handle Dark_s_handle;
-
- // If flat_orientation_ is defined, we give it the Dark triangulation
- // so that the orientation it uses for "current_dimension()"-simplices is
- // coherent with the global triangulation
- Dark_triangulation dark_side(
- maximal_dimension(),
- flat_orientation_ ?
- std::pair<int, const Flat_orientation_d *>(current_dimension(), flat_orientation_.get_ptr())
- : std::pair<int, const Flat_orientation_d *>((std::numeric_limits<int>::max)(), (Flat_orientation_d*) NULL) );
-
- Dark_s_handle dark_s;
- Dark_v_handle dark_v;
- typedef std::map<Vertex_handle, Dark_v_handle> Vertex_map;
- Vertex_map light_to_dark;
- typename Vertex_set::iterator vit = verts.begin();
- while( vit != verts.end() )
- {
- dark_v = dark_side.insert((*vit)->point(), dark_s);
- dark_s = dark_v->full_cell();
- dark_v->data() = *vit;
- light_to_dark[*vit] = dark_v;
- ++vit;
- }
-
- if( dark_side.current_dimension() != current_dimension() )
- {
- CGAL_assertion( dark_side.current_dimension() + 1 == current_dimension() );
- // Here, the finite neighbors of |v| span a affine subspace of
- // dimension one less than the current dimension. Two cases are possible:
- if( (size_type)(verts.size() + 1) == number_of_vertices() )
- {
- remove_decrease_dimension(v);
- return Full_cell_handle();
- }
- else
- { // |v| is strictly outside the convex hull of the rest of the points. This is an
- // easy case: first, modify the finite full_cells, then, delete the infinite ones.
- // We don't even need the Dark triangulation.
- Simplices infinite_simps;
- {
- Simplices finite_simps;
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- if( is_infinite(*it) )
- infinite_simps.push_back(*it);
- else
- finite_simps.push_back(*it);
- simps.swap(finite_simps);
- } // now, simps only contains finite simplices
- // First, modify the finite full_cells:
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- {
- int v_idx = (*it)->index(v);
- tds().associate_vertex_with_full_cell(*it, v_idx, infinite_vertex());
- }
- // Make the handles to infinite full cells searchable
- infinite_simps.make_searchable();
- // Then, modify the neighboring relation
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- {
- for( int i = 0; i <= current_dimension(); ++i )
- {
- if (is_infinite((*it)->vertex(i)))
- continue;
- (*it)->vertex(i)->set_full_cell(*it);
- Full_cell_handle n = (*it)->neighbor(i);
- // Was |n| a finite full cell prior to removing |v| ?
- if( ! infinite_simps.contains(n) )
- continue;
- int n_idx = n->index(v);
- set_neighbors(*it, i, n->neighbor(n_idx), n->neighbor(n_idx)->index(n));
- }
- }
- Full_cell_handle ret_s;
- // Then, we delete the infinite full_cells
- for( typename Simplices::iterator it = infinite_simps.begin(); it != infinite_simps.end(); ++it )
- tds().delete_full_cell(*it);
- tds().delete_vertex(v);
- return simps.front();
- }
- }
- else // From here on, dark_side.current_dimension() == current_dimension()
- {
- dark_side.infinite_vertex()->data() = infinite_vertex();
- light_to_dark[infinite_vertex()] = dark_side.infinite_vertex();
- }
-
- // Now, compute the conflict zone of v->point() in
- // the dark side. This is precisely the set of full_cells
- // that we have to glue back into the light side.
- Dark_face dark_f(dark_side.maximal_dimension());
- Dark_facet dark_ft;
- typename Dark_triangulation::Locate_type lt;
- dark_s = dark_side.locate(v->point(), lt, dark_f, dark_ft);
- CGAL_assertion( lt != Dark_triangulation::ON_VERTEX
- && lt != Dark_triangulation::OUTSIDE_AFFINE_HULL );
-
- // |ret_s| is the full_cell that we return
- Dark_s_handle dark_ret_s = dark_s;
- Full_cell_handle ret_s;
-
- typedef typename Base::template Full_cell_set<Dark_s_handle> Dark_full_cells;
- Dark_full_cells conflict_zone;
- std::back_insert_iterator<Dark_full_cells> dark_out(conflict_zone);
-
- dark_ft = dark_side.compute_conflict_zone(v->point(), dark_s, dark_out);
- // Make the dark simplices in the conflict zone searchable
- conflict_zone.make_searchable();
-
- // THE FOLLOWING SHOULD MAYBE GO IN TDS.
- // Here is the plan:
- // 1. Pick any Facet from boundary of the light zone
- // 2. Find corresponding Facet on boundary of dark zone
- // 3. stitch.
-
- // 1. Build a facet on the boudary of the light zone:
- Full_cell_handle light_s = *simps.begin();
- Facet light_ft(light_s, light_s->index(v));
-
- // 2. Find corresponding Dark_facet on boundary of the dark zone
- Dark_full_cells dark_incident_s;
- for( int i = 0; i <= current_dimension(); ++i )
- {
- if( index_of_covertex(light_ft) == i )
- continue;
- Dark_v_handle dark_v = light_to_dark[full_cell(light_ft)->vertex(i)];
- dark_incident_s.clear();
- dark_out = std::back_inserter(dark_incident_s);
- dark_side.tds().incident_full_cells(dark_v, dark_out);
- for( typename Dark_full_cells::iterator it = dark_incident_s.begin(); it != dark_incident_s.end(); ++it )
- {
- (*it)->data().count_ += 1;
- }
- }
-
- for( typename Dark_full_cells::iterator it = dark_incident_s.begin(); it != dark_incident_s.end(); ++it )
- {
- if( current_dimension() != (*it)->data().count_ )
- continue;
- if( ! conflict_zone.contains(*it) )
- continue;
- // We found a full_cell incident to the dark facet corresponding to the light facet |light_ft|
- int ft_idx = 0;
- while( light_s->has_vertex( (*it)->vertex(ft_idx)->data() ) )
- ++ft_idx;
- dark_ft = Dark_facet(*it, ft_idx);
- break;
- }
- // Pre-3. Now, we are ready to traverse both boundary and do the stiching.
-
- // But first, we create the new full_cells in the light triangulation,
- // with as much adjacency information as possible.
-
- // Create new full_cells with vertices
- for( typename Dark_full_cells::iterator it = conflict_zone.begin(); it != conflict_zone.end(); ++it )
- {
- Full_cell_handle new_s = new_full_cell();
- (*it)->data().light_copy_ = new_s;
- for( int i = 0; i <= current_dimension(); ++i )
- tds().associate_vertex_with_full_cell(new_s, i, (*it)->vertex(i)->data());
- if( dark_ret_s == *it )
- ret_s = new_s;
- }
-
- // Setup adjacencies inside the hole
- for( typename Dark_full_cells::iterator it = conflict_zone.begin(); it != conflict_zone.end(); ++it )
- {
- Full_cell_handle new_s = (*it)->data().light_copy_;
- for( int i = 0; i <= current_dimension(); ++i )
- if( conflict_zone.contains((*it)->neighbor(i)) )
- tds().set_neighbors(new_s, i, (*it)->neighbor(i)->data().light_copy_, (*it)->mirror_index(i));
- }
-
- // 3. Stitch
- simps.make_searchable();
- typedef std::queue<std::pair<Facet, Dark_facet> > Queue;
- Queue q;
- q.push(std::make_pair(light_ft, dark_ft));
- dark_s = dark_side.full_cell(dark_ft);
- int dark_i = dark_side.index_of_covertex(dark_ft);
- // mark dark_ft as visited:
- // TODO try by marking with Dark_v_handle (vertex)
- dark_s->neighbor(dark_i)->set_neighbor(dark_s->mirror_index(dark_i), Dark_s_handle());
- while( ! q.empty() )
- {
- std::pair<Facet, Dark_facet> p = q.front();
- q.pop();
- light_ft = p.first;
- dark_ft = p.second;
- light_s = full_cell(light_ft);
- int light_i = index_of_covertex(light_ft);
- dark_s = dark_side.full_cell(dark_ft);
- int dark_i = dark_side.index_of_covertex(dark_ft);
- Full_cell_handle light_n = light_s->neighbor(light_i);
- set_neighbors(dark_s->data().light_copy_, dark_i, light_n, light_s->mirror_index(light_i));
- for( int di = 0; di <= current_dimension(); ++di )
- {
- if( di == dark_i )
- continue;
- int li = light_s->index(dark_s->vertex(di)->data());
- Rotor light_r(light_s, li, light_i);
- typename Dark_triangulation::Rotor dark_r(dark_s, di, dark_i);
-
- while (simps.contains(cpp11::get<0>(light_r)->neighbor(cpp11::get<1>(light_r))))
- light_r = rotate_rotor(light_r);
-
- while (conflict_zone.contains(cpp11::get<0>(dark_r)->neighbor(cpp11::get<1>(dark_r))))
- dark_r = dark_side.rotate_rotor(dark_r);
-
- Dark_s_handle dark_ns = cpp11::get<0>(dark_r);
- int dark_ni = cpp11::get<1>(dark_r);
- Full_cell_handle light_ns = cpp11::get<0>(light_r);
- int light_ni = cpp11::get<1>(light_r);
- // mark dark_r as visited:
- // TODO try by marking with Dark_v_handle (vertex)
- Dark_s_handle outside = dark_ns->neighbor(dark_ni);
- Dark_v_handle mirror = dark_ns->mirror_vertex(dark_ni, current_dimension());
- int dn = outside->index(mirror);
- if( Dark_s_handle() == outside->neighbor(dn) )
- continue;
- outside->set_neighbor(dn, Dark_s_handle());
- q.push(std::make_pair(Facet(light_ns, light_ni), Dark_facet(dark_ns, dark_ni)));
- }
- }
- tds().delete_full_cells(simps.begin(), simps.end());
- tds().delete_vertex(v);
- return ret_s;
-}
-
-template< typename DCTraits, typename TDS >
-void
-Delaunay_triangulation<DCTraits, TDS>
-::remove_decrease_dimension(Vertex_handle v)
-{
- CGAL_precondition( current_dimension() >= 0 );
- tds().remove_decrease_dimension(v, infinite_vertex());
- // reset the predicates:
- reset_flat_orientation();
- if( 1 <= current_dimension() )
- {
- Full_cell_handle inf_v_cell = infinite_vertex()->full_cell();
- int inf_v_index = inf_v_cell->index(infinite_vertex());
- Full_cell_handle s = inf_v_cell->neighbor(inf_v_index);
- Orientation o = orientation(s);
- CGAL_assertion( ZERO != o );
- if( NEGATIVE == o )
- reorient_full_cells();
- }
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - INSERTIONS
-
-template< typename DCTraits, typename TDS >
-typename Delaunay_triangulation<DCTraits, TDS>::Vertex_handle
-Delaunay_triangulation<DCTraits, TDS>
-::insert(const Point & p, Locate_type lt, const Face & f, const Facet &, Full_cell_handle s)
-{
- switch( lt )
- {
- case Base::OUTSIDE_AFFINE_HULL:
- return insert_outside_affine_hull(p);
- break;
- case Base::ON_VERTEX:
- {
- Vertex_handle v = s->vertex(f.index(0));
- v->set_point(p);
- return v;
- break;
- }
- default:
- if( 1 == current_dimension() )
- {
- if( Base::OUTSIDE_CONVEX_HULL == lt )
- {
- return insert_outside_convex_hull_1(p, s);
- }
- Vertex_handle v = tds().insert_in_full_cell(s);
- v->set_point(p);
- return v;
- }
- else
- return insert_in_conflicting_cell(p, s);
- break;
- }
-}
-
-/*
-[Undocumented function]
-
-Inserts the point `p` in the Delaunay triangulation. Returns a handle to the
-(possibly newly created) vertex at that position.
-\pre The point `p`
-must lie outside the affine hull of the Delaunay triangulation. This implies that
-`dt`.`current_dimension()` must be less than `dt`.`maximal_dimension()`.
-*/
-template< typename DCTraits, typename TDS >
-typename Delaunay_triangulation<DCTraits, TDS>::Vertex_handle
-Delaunay_triangulation<DCTraits, TDS>
-::insert_outside_affine_hull(const Point & p)
-{
- // we don't use Base::insert_outside_affine_hull(...) because here, we
- // also need to reset the side_of_oriented_subsphere functor.
- CGAL_precondition( current_dimension() < maximal_dimension() );
- Vertex_handle v = tds().insert_increase_dimension(infinite_vertex());
- // reset the predicates:
- reset_flat_orientation();
- v->set_point(p);
- if( current_dimension() >= 1 )
- {
- Full_cell_handle inf_v_cell = infinite_vertex()->full_cell();
- int inf_v_index = inf_v_cell->index(infinite_vertex());
- Full_cell_handle s = inf_v_cell->neighbor(inf_v_index);
- Orientation o = orientation(s);
- CGAL_assertion( ZERO != o );
- if( NEGATIVE == o )
- reorient_full_cells();
-
- // We just inserted the second finite point and the right infinite
- // cell is like : (inf_v, v), but we want it to be (v, inf_v) to be
- // consistent with the rest of the cells
- if (current_dimension() == 1)
- {
- // Is "inf_v_cell" the right infinite cell?
- // Then inf_v_index should be 1
- if (inf_v_cell->neighbor(inf_v_index)->index(inf_v_cell) == 0
- && inf_v_index == 0)
- {
- inf_v_cell->swap_vertices(
- current_dimension() - 1, current_dimension());
- }
- // Otherwise, let's find the right infinite cell
- else
- {
- inf_v_cell = inf_v_cell->neighbor((inf_v_index + 1) % 2);
- inf_v_index = inf_v_cell->index(infinite_vertex());
- // Is "inf_v_cell" the right infinite cell?
- // Then inf_v_index should be 1
- if (inf_v_cell->neighbor(inf_v_index)->index(inf_v_cell) == 0
- && inf_v_index == 0)
- {
- inf_v_cell->swap_vertices(
- current_dimension() - 1, current_dimension());
- }
- }
- }
- }
- return v;
-}
-
-/*!
-[Undocumented function]
-
-Inserts the point `p` in the Delaunay triangulation. Returns a handle to the
-(possibly newly created) vertex at that position.
-\pre The point `p` must be in conflict with the full cell `c`.
-*/
-template< typename DCTraits, typename TDS >
-typename Delaunay_triangulation<DCTraits, TDS>::Vertex_handle
-Delaunay_triangulation<DCTraits, TDS>
-::insert_in_conflicting_cell(const Point & p, Full_cell_handle s)
-{
- CGAL_precondition(is_in_conflict(p, s));
-
- // for storing conflicting full_cells.
- typedef std::vector<Full_cell_handle> Full_cell_h_vector;
- CGAL_STATIC_THREAD_LOCAL_VARIABLE(Full_cell_h_vector,cs,0);
- cs.clear();
-
- std::back_insert_iterator<Full_cell_h_vector> out(cs);
- Facet ft = compute_conflict_zone(p, s, out);
- return insert_in_hole(p, cs.begin(), cs.end(), ft);
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATHERING CONFLICTING SIMPLICES
-
-// NOT DOCUMENTED
-template< typename DCTraits, typename TDS >
-template< typename OrientationPred >
-Oriented_side
-Delaunay_triangulation<DCTraits, TDS>
-::perturbed_side_of_positive_sphere(const Point & p, Full_cell_const_handle s,
- const OrientationPred & ori) const
-{
- CGAL_precondition_msg( ! is_infinite(s), "full cell must be finite");
- CGAL_expensive_precondition( POSITIVE == orientation(s) );
- typedef std::vector<const Point *> Points;
- Points points(current_dimension() + 2);
- int i(0);
- for( ; i <= current_dimension(); ++i )
- points[i] = &(s->vertex(i)->point());
- points[i] = &p;
- std::sort(points.begin(), points.end(),
- internal::Triangulation::Compare_points_for_perturbation<Self>(*this));
- typename Points::const_reverse_iterator cut_pt = points.rbegin();
- Points test_points;
- while( cut_pt != points.rend() )
- {
- if( &p == *cut_pt )
- // because the full_cell "s" is assumed to be positively oriented
- return ON_NEGATIVE_SIDE; // we consider |p| to lie outside the sphere
- test_points.clear();
- typename Base::Point_const_iterator spit = points_begin(s);
- int adjust_sign = -1;
- for( i = 0; i < current_dimension(); ++i )
- {
- if( &(*spit) == *cut_pt )
- {
- ++spit;
- adjust_sign = (((current_dimension() + i) % 2) == 0) ? -1 : +1;
- }
- test_points.push_back(&(*spit));
- ++spit;
- }
- test_points.push_back(&p);
-
- typedef typename CGAL::Iterator_project<typename Points::iterator,
- internal::Triangulation::Point_from_pointer<Self>,
- const Point &, const Point *> Point_pointer_iterator;
-
- Orientation ori_value = ori(
- Point_pointer_iterator(test_points.begin()),
- Point_pointer_iterator(test_points.end()));
-
- if( ZERO != ori_value )
- return Oriented_side( - adjust_sign * ori_value );
-
- ++cut_pt;
- }
- CGAL_assertion(false); // we should never reach here
- return ON_NEGATIVE_SIDE;
-}
-
-template< typename DCTraits, typename TDS >
-bool
-Delaunay_triangulation<DCTraits, TDS>
-::is_in_conflict(const Point & p, Full_cell_const_handle s) const
-{
- CGAL_precondition( 2 <= current_dimension() );
- if( current_dimension() < maximal_dimension() )
- {
- Conflict_pred_in_subspace c(*this, p, coaffine_orientation_predicate(), side_of_oriented_subsphere_predicate());
- return c(s);
- }
- else
- {
- Orientation_d ori = geom_traits().orientation_d_object();
- Side_of_oriented_sphere_d side = geom_traits().side_of_oriented_sphere_d_object();
- Conflict_pred_in_fullspace c(*this, p, ori, side);
- return c(s);
- }
-}
-
-template< typename DCTraits, typename TDS >
-template< typename OutputIterator >
-typename Delaunay_triangulation<DCTraits, TDS>::Facet
-Delaunay_triangulation<DCTraits, TDS>
-::compute_conflict_zone(const Point & p, Full_cell_handle s, OutputIterator out) const
-{
- CGAL_precondition( 2 <= current_dimension() );
- if( current_dimension() < maximal_dimension() )
- {
- Conflict_pred_in_subspace c(*this, p, coaffine_orientation_predicate(), side_of_oriented_subsphere_predicate());
- Conflict_traversal_pred_in_subspace tp(*this, c);
- return tds().gather_full_cells(s, tp, out);
- }
- else
- {
- Orientation_d ori = geom_traits().orientation_d_object();
- Side_of_oriented_sphere_d side = geom_traits().side_of_oriented_sphere_d_object();
- Conflict_pred_in_fullspace c(*this, p, ori, side);
- Conflict_traversal_pred_in_fullspace tp(*this, c);
- return tds().gather_full_cells(s, tp, out);
- }
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - VALIDITY
-
-template< typename DCTraits, typename TDS >
-bool
-Delaunay_triangulation<DCTraits, TDS>
-::is_valid(bool verbose, int level) const
-{
- if (!Base::is_valid(verbose, level))
- return false;
-
- int dim = current_dimension();
- if (dim == maximal_dimension())
- {
- for (Finite_full_cell_const_iterator cit = this->finite_full_cells_begin() ;
- cit != this->finite_full_cells_end() ; ++cit )
- {
- Full_cell_const_handle ch = cit.base();
- for(int i = 0; i < dim+1 ; ++i )
- {
- // If the i-th neighbor is not an infinite cell
- Vertex_handle opposite_vh =
- ch->neighbor(i)->vertex(ch->neighbor(i)->index(ch));
- if (!is_infinite(opposite_vh))
- {
- Side_of_oriented_sphere_d side =
- geom_traits().side_of_oriented_sphere_d_object();
- if (side(Point_const_iterator(ch->vertices_begin()),
- Point_const_iterator(ch->vertices_end()),
- opposite_vh->point()) == ON_BOUNDED_SIDE)
- {
- if (verbose)
- CGAL_warning_msg(false, "Non-empty sphere");
- return false;
- }
- }
- }
- }
- }
- return true;
-}
-
-
-} //namespace CGAL
-
-#endif // CGAL_DELAUNAY_COMPLEX_H
diff --git a/include/gudhi_patches/CGAL/Epeck_d.h b/include/gudhi_patches/CGAL/Epeck_d.h
deleted file mode 100644
index 52bce84c..00000000
--- a/include/gudhi_patches/CGAL/Epeck_d.h
+++ /dev/null
@@ -1,53 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_EPECK_D_H
-#define CGAL_EPECK_D_H
-#include <CGAL/NewKernel_d/Cartesian_base.h>
-#include <CGAL/NewKernel_d/Wrapper/Cartesian_wrap.h>
-#include <CGAL/NewKernel_d/Kernel_d_interface.h>
-#include <CGAL/internal/Exact_type_selector.h>
-
-
-namespace CGAL {
-#define CGAL_BASE \
- Cartesian_base_d<internal::Exact_field_selector<double>::Type, Dim>
-template<class Dim>
-struct Epeck_d_help1
-: CGAL_BASE
-{
- CGAL_CONSTEXPR Epeck_d_help1(){}
- CGAL_CONSTEXPR Epeck_d_help1(int d):CGAL_BASE(d){}
-};
-#undef CGAL_BASE
-#define CGAL_BASE \
- Kernel_d_interface< \
- Cartesian_wrap< \
- Epeck_d_help1<Dim>, \
- Epeck_d<Dim> > >
-template<class Dim>
-struct Epeck_d
-: CGAL_BASE
-{
- CGAL_CONSTEXPR Epeck_d(){}
- CGAL_CONSTEXPR Epeck_d(int d):CGAL_BASE(d){}
-};
-#undef CGAL_BASE
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/Epick_d.h b/include/gudhi_patches/CGAL/Epick_d.h
deleted file mode 100644
index 64438539..00000000
--- a/include/gudhi_patches/CGAL/Epick_d.h
+++ /dev/null
@@ -1,71 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_EPICK_D_H
-#define CGAL_EPICK_D_H
-#include <CGAL/NewKernel_d/Cartesian_base.h>
-#include <CGAL/NewKernel_d/Cartesian_static_filters.h>
-#include <CGAL/NewKernel_d/Cartesian_filter_K.h>
-#include <CGAL/NewKernel_d/Wrapper/Cartesian_wrap.h>
-#include <CGAL/NewKernel_d/Kernel_d_interface.h>
-#include <CGAL/internal/Exact_type_selector.h>
-#include <CGAL/Interval_nt.h>
-#include <CGAL/NewKernel_d/Types/Weighted_point.h>
-
-
-namespace CGAL {
-#define CGAL_BASE \
- Cartesian_filter_K< \
- Cartesian_base_d<double, Dim>, \
- Cartesian_base_d<Interval_nt_advanced, Dim>, \
- Cartesian_base_d<internal::Exact_field_selector<double>::Type, Dim> \
- >
-template<class Dim>
-struct Epick_d_help1
-: CGAL_BASE
-{
- CGAL_CONSTEXPR Epick_d_help1(){}
- CGAL_CONSTEXPR Epick_d_help1(int d):CGAL_BASE(d){}
-};
-#undef CGAL_BASE
-#define CGAL_BASE \
- Cartesian_static_filters<Dim,Epick_d_help1<Dim>,Epick_d_help2<Dim> >
-template<class Dim>
-struct Epick_d_help2
-: CGAL_BASE
-{
- CGAL_CONSTEXPR Epick_d_help2(){}
- CGAL_CONSTEXPR Epick_d_help2(int d):CGAL_BASE(d){}
-};
-#undef CGAL_BASE
-#define CGAL_BASE \
- Kernel_d_interface< \
- Cartesian_wrap< \
- Epick_d_help2<Dim>, \
- Epick_d<Dim> > >
-template<class Dim>
-struct Epick_d
-: CGAL_BASE
-{
- CGAL_CONSTEXPR Epick_d(){}
- CGAL_CONSTEXPR Epick_d(int d):CGAL_BASE(d){}
-};
-#undef CGAL_BASE
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/IO/Triangulation_off_ostream.h b/include/gudhi_patches/CGAL/IO/Triangulation_off_ostream.h
deleted file mode 100644
index 701f0820..00000000
--- a/include/gudhi_patches/CGAL/IO/Triangulation_off_ostream.h
+++ /dev/null
@@ -1,320 +0,0 @@
-// Copyright (c) 2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL: $
-// $Id: $
-//
-// Author(s) : Clement Jamin
-
-
-#ifndef CGAL_TRIANGULATION_IO_H
-#define CGAL_TRIANGULATION_IO_H
-
-#include <CGAL/Epick_d.h>
-#include <CGAL/Triangulation.h>
-#include <sstream>
-#include <iostream>
-
-namespace CGAL {
-
-namespace Triangulation_IO
-{
-// TODO: test if the stream is binary or text?
-template<typename Traits, typename P>
-int
-output_point(std::ostream & os, const Traits &traits, const P & p)
-{
- typedef typename Traits::Compute_coordinate_d Ccd;
- const Ccd ccd = traits.compute_coordinate_d_object();
- const int dim = traits.point_dimension_d_object()(p);
- if (dim > 0)
- {
- os << ccd(p, 0);
- for (int i = 1 ; i < dim ; ++i)
- os << " " << CGAL::to_double(ccd(p, i));
- }
- return dim;
-}
-
-// TODO: test if the stream is binary or text?
-template<typename Traits, typename P>
-int
-output_weighted_point(std::ostream & os, const Traits &traits, const P & p,
- bool output_weight = true)
-{
- typedef typename Traits::Compute_coordinate_d Ccd;
- typename Traits::Construct_point_d cp =
- traits.construct_point_d_object();
- typename Traits::Compute_weight_d pt_weight = traits.compute_weight_d_object();
- const Ccd ccd = traits.compute_coordinate_d_object();
- const int dim = traits.point_dimension_d_object()(p);
- if (dim > 0)
- {
- output_point(os, traits, p);
- if (output_weight)
- os << " " << pt_weight(p);
- }
- return dim;
-}
-
-// TODO: test if the stream is binary or text?
-template<typename Traits, typename FCH>
-void
-output_full_cell(std::ostream & os, const Traits &traits, const FCH & fch,
- bool output_weights = false)
-{
- typename FCH::value_type::Vertex_handle_iterator vit = fch->vertices_begin();
- for( ; vit != fch->vertices_end(); ++vit )
- {
- int dim;
- if (output_weights)
- dim = output_weighted_point(os, traits, (*vit)->point());
- else
- dim = output_point(os, traits, (*vit)->point());
- if (dim > 0)
- os << std::endl;
- }
-}
-
-// TODO: test if the stream is binary or text?
-/*template<typename Traits, typename P>
-void
-input_point(std::istream & is, const Traits &traits, P & p)
-{
- typedef typename Traits::FT FT;
- std::vector<FT> coords;
-
- std::string line;
- for(;;)
- {
- if (!std::getline(is, line))
- return is;
- if (line != "")
- break;
- }
- std::stringstream line_sstr(line);
- FT temp;
- while (line_sstr >> temp)
- coords.push_back(temp);
-
- p = traits.construct_point_d_object()(coords.begin(), coords.end());
-}*/
-
-} // namespace Triangulation_IO
-
-///////////////////////////////////////////////////////////////
-// TODO: replace these operator>> by an "input_point" function
-///////////////////////////////////////////////////////////////
-
-// TODO: test if the stream is binary or text?
-template<typename K>
-std::istream &
-operator>>(std::istream &is, typename Wrap::Point_d<K> & p)
-{
- typedef typename Wrap::Point_d<K> P;
- typedef typename K::FT FT;
- std::vector<FT> coords;
-
- std::string line;
- for(;;)
- {
- if (!std::getline(is, line))
- return is;
- if (line != "")
- break;
- }
- std::stringstream line_sstr(line);
- FT temp;
- while (line_sstr >> temp)
- coords.push_back(temp);
-
- p = P(coords.begin(), coords.end());
- return is;
-}
-
-// TODO: test if the stream is binary or text?
-template<typename K>
-std::istream &
-operator>>(std::istream &is, typename Wrap::Weighted_point_d<K> & wp)
-{
- typedef typename Wrap::Point_d<K> P;
- typedef typename Wrap::Weighted_point_d<K> WP;
- typedef typename K::FT FT;
-
- std::string line;
- for(;;)
- {
- if (!std::getline(is, line))
- return is;
- if (line != "")
- break;
- }
- std::stringstream line_sstr(line);
- FT temp;
- std::vector<FT> coords;
- while (line_sstr >> temp)
- coords.push_back(temp);
-
- typename std::vector<FT>::iterator last = coords.end() - 1;
- P p = P(coords.begin(), last);
- wp = WP(p, *last);
-
- return is;
-}
-
-// TODO: test if the stream is binary or text?
-template<typename K>
-std::istream &
-operator>>(std::istream &is, typename Wrap::Vector_d<K> & v)
-{
- typedef typename Wrap::Vector_d<K> V;
- typedef typename K::FT FT;
- std::vector<FT> coords;
-
- std::string line;
- for (;;)
- {
- if (!std::getline(is, line))
- return is;
- if (line != "")
- break;
- }
- std::stringstream line_sstr(line);
- FT temp;
- while (line_sstr >> temp)
- coords.push_back(temp);
-
- v = V(coords.begin(), coords.end());
- return is;
-}
-
-template < class GT, class TDS >
-std::ostream &
-export_triangulation_to_off(std::ostream & os,
- const Triangulation<GT,TDS> & tr,
- bool in_3D_export_surface_only = false)
-{
- typedef Triangulation<GT,TDS> Tr;
- typedef typename Tr::Vertex_const_handle Vertex_handle;
- typedef typename Tr::Finite_vertex_const_iterator Finite_vertex_iterator;
- typedef typename Tr::Finite_full_cell_const_iterator Finite_full_cell_iterator;
- typedef typename Tr::Full_cell_const_iterator Full_cell_iterator;
- typedef typename Tr::Full_cell Full_cell;
- typedef typename Full_cell::Vertex_handle_const_iterator Full_cell_vertex_iterator;
-
- if (tr.maximal_dimension() < 2 || tr.maximal_dimension() > 3)
- {
- std::cerr << "Warning: export_tds_to_off => dimension should be 2 or 3.";
- os << "Warning: export_tds_to_off => dimension should be 2 or 3.";
- return os;
- }
-
- size_t n = tr.number_of_vertices();
-
- std::stringstream output;
-
- // write the vertices
- std::map<Vertex_handle, int> index_of_vertex;
- int i = 0;
- for(Finite_vertex_iterator it = tr.finite_vertices_begin();
- it != tr.finite_vertices_end(); ++it, ++i)
- {
- Triangulation_IO::output_point(output, tr.geom_traits(), it->point());
- if (tr.maximal_dimension() == 2)
- output << " 0";
- output << std::endl;
- index_of_vertex[it.base()] = i;
- }
- CGAL_assertion( i == n );
-
- size_t number_of_triangles = 0;
- if (tr.maximal_dimension() == 2)
- {
- for (Finite_full_cell_iterator fch = tr.finite_full_cells_begin() ;
- fch != tr.finite_full_cells_end() ; ++fch)
- {
- output << "3 ";
- for (Full_cell_vertex_iterator vit = fch->vertices_begin() ;
- vit != fch->vertices_end() ; ++vit)
- {
- output << index_of_vertex[*vit] << " ";
- }
- output << std::endl;
- ++number_of_triangles;
- }
- }
- else if (tr.maximal_dimension() == 3)
- {
- if (in_3D_export_surface_only)
- {
- // Parse boundary facets
- for (Full_cell_iterator fch = tr.full_cells_begin() ;
- fch != tr.full_cells_end() ; ++fch)
- {
- if (tr.is_infinite(fch))
- {
- output << "3 ";
- for (Full_cell_vertex_iterator vit = fch->vertices_begin() ;
- vit != fch->vertices_end() ; ++vit)
- {
- if (!tr.is_infinite(*vit))
- output << index_of_vertex[*vit] << " ";
- }
- output << std::endl;
- ++number_of_triangles;
- }
- }
- }
- else
- {
- // Parse finite cells
- for (Finite_full_cell_iterator fch = tr.finite_full_cells_begin() ;
- fch != tr.finite_full_cells_end() ; ++fch)
- {
- output << "3 "
- << index_of_vertex[fch->vertex(0)] << " "
- << index_of_vertex[fch->vertex(1)] << " "
- << index_of_vertex[fch->vertex(2)]
- << std::endl;
- output << "3 "
- << index_of_vertex[fch->vertex(0)] << " "
- << index_of_vertex[fch->vertex(2)] << " "
- << index_of_vertex[fch->vertex(3)]
- << std::endl;
- output << "3 "
- << index_of_vertex[fch->vertex(1)] << " "
- << index_of_vertex[fch->vertex(2)] << " "
- << index_of_vertex[fch->vertex(3)]
- << std::endl;
- output << "3 "
- << index_of_vertex[fch->vertex(0)] << " "
- << index_of_vertex[fch->vertex(1)] << " "
- << index_of_vertex[fch->vertex(3)]
- << std::endl;
- number_of_triangles += 4;
- }
- }
- }
-
- os << "OFF \n"
- << n << " "
- << number_of_triangles << " 0\n"
- << output.str();
-
- return os;
-}
-
-} //namespace CGAL
-
-#endif // CGAL_TRIANGULATION_IO_H
diff --git a/include/gudhi_patches/CGAL/Kd_tree.h b/include/gudhi_patches/CGAL/Kd_tree.h
deleted file mode 100644
index f085b0da..00000000
--- a/include/gudhi_patches/CGAL/Kd_tree.h
+++ /dev/null
@@ -1,582 +0,0 @@
-// Copyright (c) 2002,2011,2014 Utrecht University (The Netherlands), Max-Planck-Institute Saarbruecken (Germany).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Hans Tangelder (<hanst@cs.uu.nl>),
-// : Waqar Khan <wkhan@mpi-inf.mpg.de>
-
-#ifndef CGAL_KD_TREE_H
-#define CGAL_KD_TREE_H
-
-#include "Kd_tree_node.h"
-
-#include <CGAL/basic.h>
-#include <CGAL/assertions.h>
-#include <vector>
-
-#include <CGAL/algorithm.h>
-#include <CGAL/internal/Get_dimension_tag.h>
-#include <CGAL/Search_traits.h>
-
-
-#include <deque>
-#include <boost/container/deque.hpp>
-#include <boost/optional.hpp>
-
-#ifdef CGAL_HAS_THREADS
-#include <CGAL/mutex.h>
-#endif
-
-namespace CGAL {
-
-//template <class SearchTraits, class Splitter_=Median_of_rectangle<SearchTraits>, class UseExtendedNode = Tag_true >
-template <class SearchTraits, class Splitter_=Sliding_midpoint<SearchTraits>, class UseExtendedNode = Tag_true >
-class Kd_tree {
-
-public:
- typedef SearchTraits Traits;
- typedef Splitter_ Splitter;
- typedef typename SearchTraits::Point_d Point_d;
- typedef typename Splitter::Container Point_container;
-
- typedef typename SearchTraits::FT FT;
- typedef Kd_tree_node<SearchTraits, Splitter, UseExtendedNode > Node;
- typedef Kd_tree_leaf_node<SearchTraits, Splitter, UseExtendedNode > Leaf_node;
- typedef Kd_tree_internal_node<SearchTraits, Splitter, UseExtendedNode > Internal_node;
- typedef Kd_tree<SearchTraits, Splitter> Tree;
- typedef Kd_tree<SearchTraits, Splitter,UseExtendedNode> Self;
-
- typedef Node* Node_handle;
- typedef const Node* Node_const_handle;
- typedef Leaf_node* Leaf_node_handle;
- typedef const Leaf_node* Leaf_node_const_handle;
- typedef Internal_node* Internal_node_handle;
- typedef const Internal_node* Internal_node_const_handle;
- typedef typename std::vector<const Point_d*>::const_iterator Point_d_iterator;
- typedef typename std::vector<const Point_d*>::const_iterator Point_d_const_iterator;
- typedef typename Splitter::Separator Separator;
- typedef typename std::vector<Point_d>::const_iterator iterator;
- typedef typename std::vector<Point_d>::const_iterator const_iterator;
-
- typedef typename std::vector<Point_d>::size_type size_type;
-
- typedef typename internal::Get_dimension_tag<SearchTraits>::Dimension D;
-
-private:
- SearchTraits traits_;
- Splitter split;
-
-
- // wokaround for https://svn.boost.org/trac/boost/ticket/9332
-#if (_MSC_VER == 1800) && (BOOST_VERSION == 105500)
- std::deque<Internal_node> internal_nodes;
- std::deque<Leaf_node> leaf_nodes;
-#else
- boost::container::deque<Internal_node> internal_nodes;
- boost::container::deque<Leaf_node> leaf_nodes;
-#endif
-
- Node_handle tree_root;
-
- Kd_tree_rectangle<FT,D>* bbox;
- std::vector<Point_d> pts;
-
- // Instead of storing the points in arrays in the Kd_tree_node
- // we put all the data in a vector in the Kd_tree.
- // and we only store an iterator range in the Kd_tree_node.
- //
- std::vector<const Point_d*> data;
-
-
- #ifdef CGAL_HAS_THREADS
- mutable CGAL_MUTEX building_mutex;//mutex used to protect const calls inducing build()
- #endif
- bool built_;
- bool removed_;
-
- // protected copy constructor
- Kd_tree(const Tree& tree)
- : traits_(tree.traits_),built_(tree.built_)
- {};
-
-
- // Instead of the recursive construction of the tree in the class Kd_tree_node
- // we do this in the tree class. The advantage is that we then can optimize
- // the allocation of the nodes.
-
- // The leaf node
- Node_handle
- create_leaf_node(Point_container& c)
- {
- Leaf_node node(true , static_cast<unsigned int>(c.size()));
- std::ptrdiff_t tmp = c.begin() - data.begin();
- node.data = pts.begin() + tmp;
-
- leaf_nodes.push_back(node);
- Leaf_node_handle nh = &leaf_nodes.back();
-
-
- return nh;
- }
-
-
- // The internal node
-
- Node_handle
- create_internal_node(Point_container& c, const Tag_true&)
- {
- return create_internal_node_use_extension(c);
- }
-
- Node_handle
- create_internal_node(Point_container& c, const Tag_false&)
- {
- return create_internal_node(c);
- }
-
-
-
- // TODO: Similiar to the leaf_init function above, a part of the code should be
- // moved to a the class Kd_tree_node.
- // It is not proper yet, but the goal was to see if there is
- // a potential performance gain through the Compact_container
- Node_handle
- create_internal_node_use_extension(Point_container& c)
- {
- Internal_node node(false);
- internal_nodes.push_back(node);
- Internal_node_handle nh = &internal_nodes.back();
-
- Separator sep;
- Point_container c_low(c.dimension(),traits_);
- split(sep, c, c_low);
- nh->set_separator(sep);
-
- int cd = nh->cutting_dimension();
- if(!c_low.empty()){
- nh->lower_low_val = c_low.tight_bounding_box().min_coord(cd);
- nh->lower_high_val = c_low.tight_bounding_box().max_coord(cd);
- }
- else{
- nh->lower_low_val = nh->cutting_value();
- nh->lower_high_val = nh->cutting_value();
- }
- if(!c.empty()){
- nh->upper_low_val = c.tight_bounding_box().min_coord(cd);
- nh->upper_high_val = c.tight_bounding_box().max_coord(cd);
- }
- else{
- nh->upper_low_val = nh->cutting_value();
- nh->upper_high_val = nh->cutting_value();
- }
-
- CGAL_assertion(nh->cutting_value() >= nh->lower_low_val);
- CGAL_assertion(nh->cutting_value() <= nh->upper_high_val);
-
- if (c_low.size() > split.bucket_size()){
- nh->lower_ch = create_internal_node_use_extension(c_low);
- }else{
- nh->lower_ch = create_leaf_node(c_low);
- }
- if (c.size() > split.bucket_size()){
- nh->upper_ch = create_internal_node_use_extension(c);
- }else{
- nh->upper_ch = create_leaf_node(c);
- }
-
-
-
-
- return nh;
- }
-
-
- // Note also that I duplicated the code to get rid if the if's for
- // the boolean use_extension which was constant over the construction
- Node_handle
- create_internal_node(Point_container& c)
- {
- Internal_node node(false);
- internal_nodes.push_back(node);
- Internal_node_handle nh = &internal_nodes.back();
- Separator sep;
-
- Point_container c_low(c.dimension(),traits_);
- split(sep, c, c_low);
- nh->set_separator(sep);
-
- if (c_low.size() > split.bucket_size()){
- nh->lower_ch = create_internal_node(c_low);
- }else{
- nh->lower_ch = create_leaf_node(c_low);
- }
- if (c.size() > split.bucket_size()){
- nh->upper_ch = create_internal_node(c);
- }else{
- nh->upper_ch = create_leaf_node(c);
- }
-
-
-
- return nh;
- }
-
-
-
-public:
-
- Kd_tree(Splitter s = Splitter(),const SearchTraits traits=SearchTraits())
- : traits_(traits),split(s), built_(false), removed_(false)
- {}
-
- template <class InputIterator>
- Kd_tree(InputIterator first, InputIterator beyond,
- Splitter s = Splitter(),const SearchTraits traits=SearchTraits())
- : traits_(traits),split(s), built_(false), removed_(false)
- {
- pts.insert(pts.end(), first, beyond);
- }
-
- bool empty() const {
- return pts.empty();
- }
-
- void
- build()
- {
- // This function is not ready to be called when a tree already exists, one
- // must call invalidate_built() first.
- CGAL_assertion(!is_built());
- CGAL_assertion(!removed_);
- const Point_d& p = *pts.begin();
- typename SearchTraits::Construct_cartesian_const_iterator_d ccci=traits_.construct_cartesian_const_iterator_d_object();
- int dim = static_cast<int>(std::distance(ccci(p), ccci(p,0)));
-
- data.reserve(pts.size());
- for(unsigned int i = 0; i < pts.size(); i++){
- data.push_back(&pts[i]);
- }
- Point_container c(dim, data.begin(), data.end(),traits_);
- bbox = new Kd_tree_rectangle<FT,D>(c.bounding_box());
- if (c.size() <= split.bucket_size()){
- tree_root = create_leaf_node(c);
- }else {
- tree_root = create_internal_node(c, UseExtendedNode());
- }
-
- //Reorder vector for spatial locality
- std::vector<Point_d> ptstmp;
- ptstmp.resize(pts.size());
- for (std::size_t i = 0; i < pts.size(); ++i){
- ptstmp[i] = *data[i];
- }
- for(std::size_t i = 0; i < leaf_nodes.size(); ++i){
- std::ptrdiff_t tmp = leaf_nodes[i].begin() - pts.begin();
- leaf_nodes[i].data = ptstmp.begin() + tmp;
- }
- pts.swap(ptstmp);
-
- data.clear();
-
- built_ = true;
- }
-
-private:
- //any call to this function is for the moment not threadsafe
- void const_build() const {
- #ifdef CGAL_HAS_THREADS
- //this ensure that build() will be called once
- CGAL_SCOPED_LOCK(building_mutex);
- if(!is_built())
- #endif
- const_cast<Self*>(this)->build(); //THIS IS NOT THREADSAFE
- }
-public:
-
- bool is_built() const
- {
- return built_;
- }
-
- void invalidate_built()
- {
- if(removed_){
- // Walk the tree to collect the remaining points.
- // Writing directly to pts would likely work, but better be safe.
- std::vector<Point_d> ptstmp;
- //ptstmp.resize(root()->num_items());
- root()->tree_items(std::back_inserter(ptstmp));
- pts.swap(ptstmp);
- removed_=false;
- CGAL_assertion(is_built()); // the rest of the cleanup must happen
- }
- if(is_built()){
- internal_nodes.clear();
- leaf_nodes.clear();
- data.clear();
- delete bbox;
- built_ = false;
- }
- }
-
- void clear()
- {
- invalidate_built();
- pts.clear();
- removed_ = false;
- }
-
- void
- insert(const Point_d& p)
- {
- invalidate_built();
- pts.push_back(p);
- }
-
- template <class InputIterator>
- void
- insert(InputIterator first, InputIterator beyond)
- {
- invalidate_built();
- pts.insert(pts.end(),first, beyond);
- }
-
-private:
- struct Equal_by_coordinates {
- SearchTraits const* traits;
- Point_d const* pp;
- bool operator()(Point_d const&q) const {
- typename SearchTraits::Construct_cartesian_const_iterator_d ccci=traits->construct_cartesian_const_iterator_d_object();
- return std::equal(ccci(*pp), ccci(*pp,0), ccci(q));
- }
- };
- Equal_by_coordinates equal_by_coordinates(Point_d const&p){
- Equal_by_coordinates ret = { &traits(), &p };
- return ret;
- }
-
-public:
- void
- remove(const Point_d& p)
- {
- remove(p, equal_by_coordinates(p));
- }
-
- template<class Equal>
- void
- remove(const Point_d& p, Equal const& equal_to_p)
- {
-#if 0
- // This code could have quadratic runtime.
- if (!is_built()) {
- std::vector<Point_d>::iterator pi = std::find(pts.begin(), pts.end(), p);
- // Precondition: the point must be there.
- CGAL_assertion (pi != pts.end());
- pts.erase(pi);
- return;
- }
-#endif
- bool success = remove_(p, 0, false, 0, false, root(), equal_to_p);
- CGAL_assertion(success);
-
- // Do not set the flag is the tree has been cleared.
- if(is_built())
- removed_ |= success;
- }
-private:
- template<class Equal>
- bool remove_(const Point_d& p,
- Internal_node_handle grandparent, bool parent_islower,
- Internal_node_handle parent, bool islower,
- Node_handle node, Equal const& equal_to_p) {
- // Recurse to locate the point
- if (!node->is_leaf()) {
- Internal_node_handle newparent = static_cast<Internal_node_handle>(node);
- // FIXME: This should be if(x<y) remove low; else remove up;
- if (traits().construct_cartesian_const_iterator_d_object()(p)[newparent->cutting_dimension()] <= newparent->cutting_value()) {
- if (remove_(p, parent, islower, newparent, true, newparent->lower(), equal_to_p))
- return true;
- }
- //if (traits().construct_cartesian_const_iterator_d_object()(p)[newparent->cutting_dimension()] >= newparent->cutting_value())
- return remove_(p, parent, islower, newparent, false, newparent->upper(), equal_to_p);
-
- CGAL_assertion(false); // Point was not found
- }
-
- // Actual removal
- Leaf_node_handle lnode = static_cast<Leaf_node_handle>(node);
- if (lnode->size() > 1) {
- iterator pi = std::find_if(lnode->begin(), lnode->end(), equal_to_p);
- // FIXME: we should ensure this never happens
- if (pi == lnode->end()) return false;
- iterator lasti = lnode->end() - 1;
- if (pi != lasti) {
- // Hack to get a non-const iterator
- std::iter_swap(pts.begin()+(pi-pts.begin()), pts.begin()+(lasti-pts.begin()));
- }
- lnode->drop_last_point();
- } else if (!equal_to_p(*lnode->begin())) {
- // FIXME: we should ensure this never happens
- return false;
- } else if (grandparent) {
- Node_handle brother = islower ? parent->upper() : parent->lower();
- if (parent_islower)
- grandparent->set_lower(brother);
- else
- grandparent->set_upper(brother);
- } else if (parent) {
- tree_root = islower ? parent->upper() : parent->lower();
- } else {
- clear();
- }
- return true;
- }
-
-public:
- //For efficiency; reserve the size of the points vectors in advance (if the number of points is already known).
- void reserve(size_t size)
- {
- pts.reserve(size);
- }
-
- //Get the capacity of the underlying points vector.
- size_t capacity()
- {
- return pts.capacity();
- }
-
-
- template <class OutputIterator, class FuzzyQueryItem>
- OutputIterator
- search(OutputIterator it, const FuzzyQueryItem& q) const
- {
- if(! pts.empty()){
-
- if(! is_built()){
- const_build();
- }
- Kd_tree_rectangle<FT,D> b(*bbox);
- return tree_root->search(it,q,b);
- }
- return it;
- }
-
-
- template <class FuzzyQueryItem>
- boost::optional<Point_d>
- search_any_point(const FuzzyQueryItem& q) const
- {
- if(! pts.empty()){
-
- if(! is_built()){
- const_build();
- }
- Kd_tree_rectangle<FT,D> b(*bbox);
- return tree_root->search_any_point(q,b);
- }
- return boost::none;
- }
-
-
- ~Kd_tree() {
- if(is_built()){
- delete bbox;
- }
- }
-
-
- const SearchTraits&
- traits() const
- {
- return traits_;
- }
-
- Node_const_handle
- root() const
- {
- if(! is_built()){
- const_build();
- }
- return tree_root;
- }
-
- Node_handle
- root()
- {
- if(! is_built()){
- build();
- }
- return tree_root;
- }
-
- void
- print() const
- {
- if(! is_built()){
- const_build();
- }
- root()->print();
- }
-
- const Kd_tree_rectangle<FT,D>&
- bounding_box() const
- {
- if(! is_built()){
- const_build();
- }
- return *bbox;
- }
-
- const_iterator
- begin() const
- {
- return pts.begin();
- }
-
- const_iterator
- end() const
- {
- return pts.end();
- }
-
- size_type
- size() const
- {
- return pts.size();
- }
-
- // Print statistics of the tree.
- std::ostream&
- statistics(std::ostream& s) const
- {
- if(! is_built()){
- const_build();
- }
- s << "Tree statistics:" << std::endl;
- s << "Number of items stored: "
- << root()->num_items() << std::endl;
- s << "Number of nodes: "
- << root()->num_nodes() << std::endl;
- s << " Tree depth: " << root()->depth() << std::endl;
- return s;
- }
-
-
-};
-
-} // namespace CGAL
-
-#endif // CGAL_KD_TREE_H
diff --git a/include/gudhi_patches/CGAL/Kd_tree_node.h b/include/gudhi_patches/CGAL/Kd_tree_node.h
deleted file mode 100644
index 909ee260..00000000
--- a/include/gudhi_patches/CGAL/Kd_tree_node.h
+++ /dev/null
@@ -1,586 +0,0 @@
-// Copyright (c) 2002,2011 Utrecht University (The Netherlands).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-//
-// Authors : Hans Tangelder (<hanst@cs.uu.nl>)
-
-#ifndef CGAL_KD_TREE_NODE_H
-#define CGAL_KD_TREE_NODE_H
-
-#include "CGAL/Splitters.h"
-
-#include <CGAL/Compact_container.h>
-#include <boost/cstdint.hpp>
-
-namespace CGAL {
-
- template <class SearchTraits, class Splitter, class UseExtendedNode>
- class Kd_tree;
-
- template < class TreeTraits, class Splitter, class UseExtendedNode >
- class Kd_tree_node {
-
- friend class Kd_tree<TreeTraits,Splitter,UseExtendedNode>;
-
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Node_handle Node_handle;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Node_const_handle Node_const_handle;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Internal_node_handle Internal_node_handle;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Internal_node_const_handle Internal_node_const_handle;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Leaf_node_handle Leaf_node_handle;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Leaf_node_const_handle Leaf_node_const_handle;
- typedef typename TreeTraits::Point_d Point_d;
-
- typedef typename TreeTraits::FT FT;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Separator Separator;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Point_d_iterator Point_d_iterator;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::iterator iterator;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::D D;
-
- bool leaf;
-
- public :
- Kd_tree_node(bool leaf_)
- :leaf(leaf_){}
-
- bool is_leaf() const{
- return leaf;
- }
-
- std::size_t
- num_items() const
- {
- if (is_leaf()){
- Leaf_node_const_handle node =
- static_cast<Leaf_node_const_handle>(this);
- return node->size();
- }
- else {
- Internal_node_const_handle node =
- static_cast<Internal_node_const_handle>(this);
- return node->lower()->num_items() + node->upper()->num_items();
- }
- }
-
- std::size_t
- num_nodes() const
- {
- if (is_leaf()) return 1;
- else {
- Internal_node_const_handle node =
- static_cast<Internal_node_const_handle>(this);
- return node->lower()->num_nodes() + node->upper()->num_nodes();
- }
- }
-
- int
- depth(const int current_max_depth) const
- {
- if (is_leaf()){
- return current_max_depth;
- }
- else {
- Internal_node_const_handle node =
- static_cast<Internal_node_const_handle>(this);
- return
- (std::max)( node->lower()->depth(current_max_depth + 1),
- node->upper()->depth(current_max_depth + 1));
- }
- }
-
- int
- depth() const
- {
- return depth(1);
- }
-
- template <class OutputIterator>
- OutputIterator
- tree_items(OutputIterator it) const {
- if (is_leaf()) {
- Leaf_node_const_handle node =
- static_cast<Leaf_node_const_handle>(this);
- if (node->size()>0)
- for (iterator i=node->begin(); i != node->end(); i++)
- {*it=*i; ++it;}
- }
- else {
- Internal_node_const_handle node =
- static_cast<Internal_node_const_handle>(this);
- it=node->lower()->tree_items(it);
- it=node->upper()->tree_items(it);
- }
- return it;
- }
-
-
- boost::optional<Point_d>
- any_tree_item() const {
- boost::optional<Point_d> result = boost::none;
- if (is_leaf()) {
- Leaf_node_const_handle node =
- static_cast<Leaf_node_const_handle>(this);
- if (node->size()>0){
- return boost::make_optional(*(node->begin()));
- }
- }
- else {
- Internal_node_const_handle node =
- static_cast<Internal_node_const_handle>(this);
- result = node->lower()->any_tree_item();
- if(! result){
- result = node->upper()->any_tree_item();
- }
- }
- return result;
- }
-
-
- void
- indent(int d) const
- {
- for(int i = 0; i < d; i++){
- std::cout << " ";
- }
- }
-
-
- void
- print(int d = 0) const
- {
- if (is_leaf()) {
- Leaf_node_const_handle node =
- static_cast<Leaf_node_const_handle>(this);
- indent(d);
- std::cout << "leaf" << std::endl;
- if (node->size()>0)
- for (iterator i=node->begin(); i != node->end(); i++)
- {indent(d);std::cout << *i << std::endl;}
- }
- else {
- Internal_node_const_handle node =
- static_cast<Internal_node_const_handle>(this);
- indent(d);
- std::cout << "lower tree" << std::endl;
- node->lower()->print(d+1);
- indent(d);
- std::cout << "separator: dim = " << node->cutting_dimension() << " val = " << node->cutting_value() << std::endl;
- indent(d);
- std::cout << "upper tree" << std::endl;
- node->upper()->print(d+1);
- }
- }
-
-
- template <class OutputIterator, class FuzzyQueryItem>
- OutputIterator
- search(OutputIterator it, const FuzzyQueryItem& q,
- Kd_tree_rectangle<FT,D>& b) const
- {
- if (is_leaf()) {
- Leaf_node_const_handle node =
- static_cast<Leaf_node_const_handle>(this);
- if (node->size()>0)
- for (iterator i=node->begin(); i != node->end(); i++)
- if (q.contains(*i))
- {*it++=*i;}
- }
- else {
- Internal_node_const_handle node =
- static_cast<Internal_node_const_handle>(this);
- // after splitting b denotes the lower part of b
- Kd_tree_rectangle<FT,D> b_upper(b);
- b.split(b_upper, node->cutting_dimension(),
- node->cutting_value());
-
- if (q.outer_range_contains(b))
- it=node->lower()->tree_items(it);
- else
- if (q.inner_range_intersects(b))
- it=node->lower()->search(it,q,b);
- if (q.outer_range_contains(b_upper))
- it=node->upper()->tree_items(it);
- else
- if (q.inner_range_intersects(b_upper))
- it=node->upper()->search(it,q,b_upper);
- };
- return it;
- }
-
-
- template <class FuzzyQueryItem>
- boost::optional<Point_d>
- search_any_point(const FuzzyQueryItem& q,
- Kd_tree_rectangle<FT,D>& b) const
- {
- boost::optional<Point_d> result = boost::none;
- if (is_leaf()) {
- Leaf_node_const_handle node =
- static_cast<Leaf_node_const_handle>(this);
- if (node->size()>0)
- for (iterator i=node->begin(); i != node->end(); i++)
- if (q.contains(*i))
- { result = *i; break; }
- }
- else {
- Internal_node_const_handle node =
- static_cast<Internal_node_const_handle>(this);
- // after splitting b denotes the lower part of b
- Kd_tree_rectangle<FT,D> b_upper(b);
- b.split(b_upper, node->cutting_dimension(),
- node->cutting_value());
-
- if (q.outer_range_contains(b)){
- result = node->lower()->any_tree_item();
- }else{
- if (q.inner_range_intersects(b)){
- result = node->lower()->search_any_point(q,b);
- }
- }
- if(result){
- return result;
- }
- if (q.outer_range_contains(b_upper)){
- result = node->upper()->any_tree_item();
- }else{
- if (q.inner_range_intersects(b_upper))
- result = node->upper()->search_any_point(q,b_upper);
- }
- }
- return result;
- }
-
- };
-
-
- template < class TreeTraits, class Splitter, class UseExtendedNode >
- class Kd_tree_leaf_node : public Kd_tree_node< TreeTraits, Splitter, UseExtendedNode >{
-
- friend class Kd_tree<TreeTraits,Splitter,UseExtendedNode>;
-
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::iterator iterator;
- typedef Kd_tree_node< TreeTraits, Splitter, UseExtendedNode> Base;
- typedef typename TreeTraits::Point_d Point_d;
-
- private:
-
- // private variables for leaf nodes
- boost::int32_t n; // denotes number of items in a leaf node
- iterator data; // iterator to data in leaf node
-
-
- public:
-
- // default constructor
- Kd_tree_leaf_node()
- {}
-
- Kd_tree_leaf_node(bool leaf_ )
- : Base(leaf_)
- {}
-
- Kd_tree_leaf_node(bool leaf_,unsigned int n_ )
- : Base(leaf_), n(n_)
- {}
-
- // members for all nodes
-
- // members for leaf nodes only
- inline
- unsigned int
- size() const
- {
- return n;
- }
-
- inline
- iterator
- begin() const
- {
- return data;
- }
-
- inline
- iterator
- end() const
- {
- return data + n;
- }
-
- inline
- void
- drop_last_point()
- {
- --n;
- }
-
- }; //leaf node
-
-
-
- template < class TreeTraits, class Splitter, class UseExtendedNode>
- class Kd_tree_internal_node : public Kd_tree_node< TreeTraits, Splitter, UseExtendedNode >{
-
- friend class Kd_tree<TreeTraits,Splitter,UseExtendedNode>;
-
- typedef Kd_tree_node< TreeTraits, Splitter, UseExtendedNode> Base;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Node_handle Node_handle;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Node_const_handle Node_const_handle;
-
- typedef typename TreeTraits::FT FT;
- typedef typename Kd_tree<TreeTraits,Splitter,UseExtendedNode>::Separator Separator;
-
- private:
-
- // private variables for internal nodes
- boost::int32_t cut_dim;
- FT cut_val;
- Node_handle lower_ch, upper_ch;
-
-
- // private variables for extended internal nodes
- FT upper_low_val;
- FT upper_high_val;
- FT lower_low_val;
- FT lower_high_val;
-
-
- public:
-
- // default constructor
- Kd_tree_internal_node()
- {}
-
- Kd_tree_internal_node(bool leaf_)
- : Base(leaf_)
- {}
-
-
- // members for internal node and extended internal node
-
- inline
- Node_const_handle
- lower() const
- {
- return lower_ch;
- }
-
- inline
- Node_const_handle
- upper() const
- {
- return upper_ch;
- }
-
- inline
- Node_handle
- lower()
- {
- return lower_ch;
- }
-
- inline
- Node_handle
- upper()
- {
- return upper_ch;
- }
-
- inline
- void
- set_lower(Node_handle nh)
- {
- lower_ch = nh;
- }
-
- inline
- void
- set_upper(Node_handle nh)
- {
- upper_ch = nh;
- }
-
- // inline Separator& separator() {return sep; }
- // use instead
- inline
- void set_separator(Separator& sep){
- cut_dim = sep.cutting_dimension();
- cut_val = sep.cutting_value();
- }
-
- inline
- FT
- cutting_value() const
- {
- return cut_val;
- }
-
- inline
- int
- cutting_dimension() const
- {
- return cut_dim;
- }
-
- // members for extended internal node only
- inline
- FT
- upper_low_value() const
- {
- return upper_low_val;
- }
-
- inline
- FT
- upper_high_value() const
- {
- return upper_high_val;
- }
-
- inline
- FT
- lower_low_value() const
- {
- return lower_low_val;
- }
-
- inline
- FT
- lower_high_value() const
- {
- return lower_high_val;
- }
-
- /*Separator&
- separator()
- {
- return Separator(cutting_dimension,cutting_value);
- }*/
-
-
- };//internal node
-
- template < class TreeTraits, class Splitter>
- class Kd_tree_internal_node<TreeTraits,Splitter,Tag_false> : public Kd_tree_node< TreeTraits, Splitter, Tag_false >{
-
- friend class Kd_tree<TreeTraits,Splitter,Tag_false>;
-
- typedef Kd_tree_node< TreeTraits, Splitter, Tag_false> Base;
- typedef typename Kd_tree<TreeTraits,Splitter,Tag_false>::Node_handle Node_handle;
- typedef typename Kd_tree<TreeTraits,Splitter,Tag_false>::Node_const_handle Node_const_handle;
-
- typedef typename TreeTraits::FT FT;
- typedef typename Kd_tree<TreeTraits,Splitter,Tag_false>::Separator Separator;
-
- private:
-
- // private variables for internal nodes
- boost::uint8_t cut_dim;
- FT cut_val;
-
- Node_handle lower_ch, upper_ch;
-
- public:
-
- // default constructor
- Kd_tree_internal_node()
- {}
-
- Kd_tree_internal_node(bool leaf_)
- : Base(leaf_)
- {}
-
-
- // members for internal node and extended internal node
-
- inline
- Node_const_handle
- lower() const
- {
- return lower_ch;
- }
-
- inline
- Node_const_handle
- upper() const
- {
- return upper_ch;
- }
-
- inline
- Node_handle
- lower()
- {
- return lower_ch;
- }
-
- inline
- Node_handle
- upper()
- {
- return upper_ch;
- }
-
- inline
- void
- set_lower(Node_handle nh)
- {
- lower_ch = nh;
- }
-
- inline
- void
- set_upper(Node_handle nh)
- {
- upper_ch = nh;
- }
-
- // inline Separator& separator() {return sep; }
- // use instead
-
- inline
- void set_separator(Separator& sep){
- cut_dim = sep.cutting_dimension();
- cut_val = sep.cutting_value();
- }
-
- inline
- FT
- cutting_value() const
- {
- return cut_val;
- }
-
- inline
- int
- cutting_dimension() const
- {
- return cut_dim;
- }
-
- /* Separator&
- separator()
- {
- return Separator(cutting_dimension,cutting_value);
- }*/
-
-
- };//internal node
-
-
-
-} // namespace CGAL
-#endif // CGAL_KDTREE_NODE_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_LA_base.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_LA_base.h
deleted file mode 100644
index c13a9801..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_LA_base.h
+++ /dev/null
@@ -1,177 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_CARTESIAN_LA_BASE_H
-#define CGAL_KERNEL_D_CARTESIAN_LA_BASE_H
-
-#include <CGAL/basic.h>
-#include <CGAL/Origin.h>
-#include <boost/type_traits/integral_constant.hpp>
-#include <CGAL/representation_tags.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Uncertain.h>
-#include <CGAL/typeset.h>
-#include <CGAL/NewKernel_d/Dimension_base.h>
-#include <CGAL/NewKernel_d/Cartesian_LA_functors.h>
-#include <CGAL/NewKernel_d/Vector/array.h>
-#include <CGAL/NewKernel_d/Vector/vector.h>
-#include <CGAL/NewKernel_d/Vector/mix.h>
-#ifdef CGAL_EIGEN3_ENABLED
-#include <CGAL/NewKernel_d/LA_eigen/LA.h>
-#else
-#error Eigen3 is required
-#endif
-
-namespace CGAL {
-
-template < typename FT_, typename Dim_,
-#if 1
- typename Vec_=Mix_vector<Array_vector<FT_, Dim_>,
- Vector_vector<FT_, Dim_>,
- FT_, Dim_>,
-#elif 0
- typename Vec_=Array_vector<FT_, Dim_>,
-#elif 0
- typename Vec_=Vector_vector<FT_, Dim_>,
-#else
- // Dangerous because of alignment. Ok on x86_64 without AVX.
- typename Vec_=LA_eigen<FT_, Dim_>,
-#endif
- typename LA_=LA_eigen<FT_,Dim_> >
- /* Default LA to Vec or to LA_eigen? */
-struct Cartesian_LA_base_d : public Dimension_base<Dim_>
-{
- typedef Cartesian_LA_base_d<FT_,Dim_> Self;
- typedef Cartesian_tag Rep_tag;
- typedef Cartesian_tag Kernel_tag;
- typedef Dim_ Default_ambient_dimension;
- typedef Dim_ Max_ambient_dimension;
- typedef Dim_ Dimension;
- typedef LA_ LA;
- template <class> struct Ambient_dimension { typedef Dim_ type; };
-
- typedef Vec_ LA_vector;
- typedef typename LA_vector::Vector Point;
- typedef typename LA_vector::Vector Vector;
- typedef typename LA_vector::Vector Vector_;
- typedef typename LA_vector::Construct_vector Constructor;
- typedef typename LA_vector::Vector_const_iterator Point_cartesian_const_iterator;
- typedef typename LA_vector::Vector_const_iterator Vector_cartesian_const_iterator;
-
- template<class, class=void> struct Type {};
- template<class D> struct Type< Point_tag, D> { typedef Vector_ type; };
- template<class D> struct Type<Vector_tag, D> { typedef Vector_ type; };
- template<class D> struct Type< FT_tag, D> { typedef FT_ type; };
- template<class D> struct Type< RT_tag, D> { typedef FT_ type; };
-
- typedef typeset<Point_tag>
- ::add<Vector_tag>::type
- // FIXME: These have nothing to do here.
- ::add<Segment_tag>::type
- ::add<Hyperplane_tag>::type
- ::add<Sphere_tag>::type
- ::add<Weighted_point_tag>::type
- Object_list;
-
- typedef typeset< Point_cartesian_const_iterator_tag>::type
- ::add<Vector_cartesian_const_iterator_tag>::type
- Iterator_list;
-
- template<class, class=void, class=boost::integral_constant<int,0> > struct Functor {
- typedef Null_functor type;
- };
- template<class D> struct Functor<Construct_ttag<Vector_tag>,D> {
- typedef CartesianDVectorBase::Construct_LA_vector<Self,Null_vector> type;
- };
- template<class D> struct Functor<Construct_ttag<Point_tag>,D> {
- typedef CartesianDVectorBase::Construct_LA_vector<Self,Origin> type;
- };
- template<class D> struct Functor<Construct_ttag<Point_cartesian_const_iterator_tag>,D> {
- typedef CartesianDVectorBase::Construct_cartesian_const_iterator<Self> type;
- };
- template<class D> struct Functor<Construct_ttag<Vector_cartesian_const_iterator_tag>,D> {
- typedef CartesianDVectorBase::Construct_cartesian_const_iterator<Self> type;
- };
- template<class D> struct Functor<Sum_of_vectors_tag,D,
- boost::integral_constant<int,!LA_vector::template Property<Has_vector_plus_minus_tag>::value> > {
- typedef CartesianDVectorBase::Sum_of_vectors<Self> type;
- };
- template<class D> struct Functor<Difference_of_vectors_tag,D,
- boost::integral_constant<int,!LA_vector::template Property<Has_vector_plus_minus_tag>::value> > {
- typedef CartesianDVectorBase::Difference_of_vectors<Self> type;
- };
- template<class D> struct Functor<Opposite_vector_tag,D,
- boost::integral_constant<int,!LA_vector::template Property<Has_vector_plus_minus_tag>::value> > {
- typedef CartesianDVectorBase::Opposite_vector<Self> type;
- };
- template<class D> struct Functor<Midpoint_tag,D,
- boost::integral_constant<int,
- !LA_vector::template Property<Has_vector_plus_minus_tag>::value
- || !LA_vector::template Property<Has_vector_scalar_ops_tag>::value> > {
- typedef CartesianDVectorBase::Midpoint<Self> type;
- };
- template<class D> struct Functor<Compute_point_cartesian_coordinate_tag,D> {
- typedef CartesianDVectorBase::Compute_cartesian_coordinate<Self> type;
- };
- template<class D> struct Functor<Compute_vector_cartesian_coordinate_tag,D> {
- typedef CartesianDVectorBase::Compute_cartesian_coordinate<Self> type;
- };
- template<class D> struct Functor<Point_dimension_tag,D> {
- typedef CartesianDVectorBase::PV_dimension<Self> type;
- };
- template<class D> struct Functor<Vector_dimension_tag,D> {
- typedef CartesianDVectorBase::PV_dimension<Self> type;
- };
- template<class D> struct Functor<Orientation_of_vectors_tag,D,
- boost::integral_constant<int,!LA_vector::template Property<Has_determinant_of_iterator_to_vectors_tag>::value> > {
- typedef CartesianDVectorBase::Orientation_of_vectors<Self> type;
- };
- template<class D> struct Functor<Orientation_of_points_tag,D,
- boost::integral_constant<int,!LA_vector::template Property<Has_determinant_of_iterator_to_points_tag>::value> > {
- typedef CartesianDVectorBase::Orientation_of_points<Self> type;
- };
- template<class D> struct Functor<Scalar_product_tag,D,
- boost::integral_constant<int,!LA_vector::template Property<Has_dot_product_tag>::value> > {
- typedef CartesianDVectorBase::Scalar_product<Self> type;
- };
- template<class D> struct Functor<Squared_distance_to_origin_tag,D,
- boost::integral_constant<int,!LA_vector::template Property<Stores_squared_norm_tag>::value> > {
- typedef CartesianDVectorBase::Squared_distance_to_origin_stored<Self> type;
- };
- // Use integral_constant<int,2> in case of failure, to distinguish from the previous one.
- template<class D> struct Functor<Squared_distance_to_origin_tag,D,
- boost::integral_constant<int,
- (LA_vector::template Property<Stores_squared_norm_tag>::value
- || !LA_vector::template Property<Has_dot_product_tag>::value)*2> > {
- typedef CartesianDVectorBase::Squared_distance_to_origin_via_dotprod<Self> type;
- };
- template<class D> struct Functor<Point_to_vector_tag,D> {
- typedef CartesianDVectorBase::Identity_functor<Self> type;
- };
- template<class D> struct Functor<Vector_to_point_tag,D> {
- typedef CartesianDVectorBase::Identity_functor<Self> type;
- };
-
- CGAL_CONSTEXPR Cartesian_LA_base_d(){}
- CGAL_CONSTEXPR Cartesian_LA_base_d(int d):Dimension_base<Dim_>(d){}
-};
-
-} //namespace CGAL
-
-#endif // CGAL_KERNEL_D_CARTESIAN_LA_BASE_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_LA_functors.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_LA_functors.h
deleted file mode 100644
index 871c463a..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_LA_functors.h
+++ /dev/null
@@ -1,344 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_CARTESIAN_LA_FUNCTORS_H
-#define CGAL_CARTESIAN_LA_FUNCTORS_H
-
-#include <CGAL/NewKernel_d/utils.h>
-#include <CGAL/is_iterator.h>
-#include <CGAL/argument_swaps.h>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/NewKernel_d/store_kernel.h>
-#include <CGAL/Dimension.h>
-
-namespace CGAL {
-namespace CartesianDVectorBase {
-#ifndef CGAL_CXX11
-namespace internal {
-template<class R_,class Dim_> struct Construct_LA_vector_ {
- struct Never_use {};
- void operator()(Never_use)const;
-};
-#define CGAL_CODE(Z,N,_) template<class R> struct Construct_LA_vector_<R,Dimension_tag<N> > { \
- typedef typename R::Constructor Constructor; \
- typedef typename Get_type<R, RT_tag>::type RT; \
- typedef typename R::Vector_ result_type; \
- result_type operator() \
- (BOOST_PP_ENUM_PARAMS(N,RT const& t)) const { \
- return typename Constructor::Values()(BOOST_PP_ENUM_PARAMS(N,t)); \
- } \
- result_type operator() \
- (BOOST_PP_ENUM_PARAMS(BOOST_PP_INC(N),RT const& t)) const { \
- return typename Constructor::Values_divide()(t##N,BOOST_PP_ENUM_PARAMS(N,t)); \
- } \
- };
-BOOST_PP_REPEAT_FROM_TO(2, 11, CGAL_CODE, _ )
-#undef CGAL_CODE
-}
-#endif
-
-template<class R_,class Zero_> struct Construct_LA_vector
-: private Store_kernel<R_>
-#ifndef CGAL_CXX11
-, public internal::Construct_LA_vector_<R_,typename R_::Default_ambient_dimension>
-#endif
-{
- //CGAL_FUNCTOR_INIT_IGNORE(Construct_LA_vector)
- CGAL_FUNCTOR_INIT_STORE(Construct_LA_vector)
- typedef R_ R;
- typedef typename R::Constructor Constructor;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename R::Vector_ result_type;
- typedef typename R_::Default_ambient_dimension Dimension;
- result_type operator()(int d)const{
- CGAL_assertion(check_dimension_eq(d,this->kernel().dimension()));
- return typename Constructor::Dimension()(d);
- }
- result_type operator()()const{
- return typename Constructor::Dimension()((std::max)(0,this->kernel().dimension()));
- }
- result_type operator()(int d, Zero_ const&)const{
- CGAL_assertion(check_dimension_eq(d,this->kernel().dimension()));
- return typename Constructor::Dimension()(d);
- }
- result_type operator()(Zero_ const&)const{
- // Makes no sense for an unknown dimension.
- return typename Constructor::Dimension()(this->kernel().dimension());
- }
- result_type operator()(result_type const& v)const{
- return v;
- }
-#ifdef CGAL_CXX11
- result_type operator()(result_type&& v)const{
- return std::move(v);
- }
-#endif
-#ifdef CGAL_CXX11
- template<class...U>
- typename std::enable_if<Constructible_from_each<RT,U...>::value &&
- boost::is_same<Dimension_tag<sizeof...(U)>, Dimension>::value,
- result_type>::type
- operator()(U&&...u)const{
- return typename Constructor::Values()(std::forward<U>(u)...);
- }
- //template<class...U,class=typename std::enable_if<Constructible_from_each<RT,U...>::value>::type,class=typename std::enable_if<(sizeof...(U)==static_dim+1)>::type,class=void>
- template<class...U>
- typename std::enable_if<Constructible_from_each<RT,U...>::value &&
- boost::is_same<Dimension_tag<sizeof...(U)-1>, Dimension>::value,
- result_type>::type
- operator()(U&&...u)const{
- return Apply_to_last_then_rest()(typename Constructor::Values_divide(),std::forward<U>(u)...);
- }
-#else
- using internal::Construct_LA_vector_<R_,typename R::Default_ambient_dimension>::operator();
-#endif
- template<class Iter> inline
- typename boost::enable_if<is_iterator_type<Iter,std::forward_iterator_tag>,result_type>::type operator()
- (Iter f,Iter g,Cartesian_tag t)const
- {
- return this->operator()((int)std::distance(f,g),f,g,t);
- }
- template<class Iter> inline
- typename boost::enable_if<is_iterator_type<Iter,std::forward_iterator_tag>,result_type>::type operator()
- (int d,Iter f,Iter g,Cartesian_tag)const
- {
- CGAL_assertion(d==std::distance(f,g));
- CGAL_assertion(check_dimension_eq(d,this->kernel().dimension()));
- return typename Constructor::Iterator()(d,f,g);
- }
- template<class Iter> inline
- typename boost::enable_if<is_iterator_type<Iter,std::bidirectional_iterator_tag>,result_type>::type operator()
- (Iter f,Iter g,Homogeneous_tag)const
- {
- --g;
- return this->operator()((int)std::distance(f,g),f,g,*g);
- }
- template<class Iter> inline
- typename boost::enable_if<is_iterator_type<Iter,std::bidirectional_iterator_tag>,result_type>::type operator()
- (int d,Iter f,Iter g,Homogeneous_tag)const
- {
- --g;
- return this->operator()(d,f,g,*g);
- }
- template<class Iter> inline
- typename boost::enable_if<is_iterator_type<Iter,std::forward_iterator_tag>,result_type>::type operator()
- (Iter f,Iter g)const
- {
- // Shouldn't it try comparing dist(f,g) to the dimension if it is known?
- return this->operator()(f,g,typename R::Rep_tag());
- }
- template<class Iter> inline
- typename boost::enable_if<is_iterator_type<Iter,std::forward_iterator_tag>,result_type>::type operator()
- (int d,Iter f,Iter g)const
- {
- return this->operator()(d,f,g,typename R::Rep_tag());
- }
-
- // Last homogeneous coordinate given separately
- template<class Iter,class NT> inline
- typename boost::enable_if<is_iterator_type<Iter,std::forward_iterator_tag>,result_type>::type operator()
- (int d,Iter f,Iter g,NT const&l)const
- {
- CGAL_assertion(d==std::distance(f,g));
- CGAL_assertion(check_dimension_eq(d,this->kernel().dimension()));
- // RT? better be safe for now
- return typename Constructor::Iterator()(d,CGAL::make_transforming_iterator(f,Divide<FT,NT>(l)),CGAL::make_transforming_iterator(g,Divide<FT,NT>(l)));
- }
- template<class Iter,class NT> inline
- typename boost::enable_if<is_iterator_type<Iter,std::forward_iterator_tag>,result_type>::type operator()
- (Iter f,Iter g,NT const&l)const
- {
- return this->operator()((int)std::distance(f,g),f,g,l);
- }
-};
-
-template<class R_> struct Compute_cartesian_coordinate {
- CGAL_FUNCTOR_INIT_IGNORE(Compute_cartesian_coordinate)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename R::Vector_ first_argument_type;
- typedef int second_argument_type;
- typedef Tag_true Is_exact;
-#ifdef CGAL_CXX11
- typedef decltype(std::declval<const first_argument_type>()[0]) result_type;
-#else
- typedef RT const& result_type;
- // RT const& doesn't work with some LA (Eigen2 for instance) so we
- // should use plain RT or find a way to detect this.
-#endif
-
- result_type operator()(first_argument_type const& v,int i)const{
- return v[i];
- }
-};
-
-template<class R_> struct Construct_cartesian_const_iterator {
- CGAL_FUNCTOR_INIT_IGNORE(Construct_cartesian_const_iterator)
- typedef R_ R;
- typedef typename R::Vector_ argument_type;
- typedef typename R::LA_vector S_;
- typedef typename R::Point_cartesian_const_iterator result_type;
- // same as Vector
- typedef Tag_true Is_exact;
-
- result_type operator()(argument_type const& v,Begin_tag)const{
- return S_::vector_begin(v);
- }
- result_type operator()(argument_type const& v,End_tag)const{
- return S_::vector_end(v);
- }
-};
-
-template<class R_> struct Midpoint {
- CGAL_FUNCTOR_INIT_IGNORE(Midpoint)
- typedef R_ R;
- typedef typename Get_type<R, Point_tag>::type first_argument_type;
- typedef typename Get_type<R, Point_tag>::type second_argument_type;
- typedef typename Get_type<R, Point_tag>::type result_type;
-
- result_type operator()(result_type const& a, result_type const& b)const{
- return (a+b)/2;
- }
-};
-
-template<class R_> struct Sum_of_vectors {
- CGAL_FUNCTOR_INIT_IGNORE(Sum_of_vectors)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type first_argument_type;
- typedef typename Get_type<R, Vector_tag>::type second_argument_type;
- typedef typename Get_type<R, Vector_tag>::type result_type;
-
- result_type operator()(result_type const& a, result_type const& b)const{
- return a+b;
- }
-};
-
-template<class R_> struct Difference_of_vectors {
- CGAL_FUNCTOR_INIT_IGNORE(Difference_of_vectors)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type first_argument_type;
- typedef typename Get_type<R, Vector_tag>::type second_argument_type;
- typedef typename Get_type<R, Vector_tag>::type result_type;
-
- result_type operator()(result_type const& a, result_type const& b)const{
- return a-b;
- }
-};
-
-template<class R_> struct Opposite_vector {
- CGAL_FUNCTOR_INIT_IGNORE(Opposite_vector)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type result_type;
- typedef typename Get_type<R, Vector_tag>::type argument_type;
-
- result_type operator()(result_type const& v)const{
- return -v;
- }
-};
-
-template<class R_> struct Scalar_product {
- CGAL_FUNCTOR_INIT_IGNORE(Scalar_product)
- typedef R_ R;
- typedef typename R::LA_vector LA;
- typedef typename Get_type<R, RT_tag>::type result_type;
- typedef typename Get_type<R, Vector_tag>::type first_argument_type;
- typedef typename Get_type<R, Vector_tag>::type second_argument_type;
-
- result_type operator()(first_argument_type const& a, second_argument_type const& b)const{
- return LA::dot_product(a,b);
- }
-};
-
-template<class R_> struct Squared_distance_to_origin_stored {
- CGAL_FUNCTOR_INIT_IGNORE(Squared_distance_to_origin_stored)
- typedef R_ R;
- typedef typename R::LA_vector LA;
- typedef typename Get_type<R, RT_tag>::type result_type;
- typedef typename Get_type<R, Point_tag>::type argument_type;
-
- result_type operator()(argument_type const& a)const{
- return LA::squared_norm(a);
- }
-};
-
-template<class R_> struct Squared_distance_to_origin_via_dotprod {
- CGAL_FUNCTOR_INIT_IGNORE(Squared_distance_to_origin_via_dotprod)
- typedef R_ R;
- typedef typename R::LA_vector LA;
- typedef typename Get_type<R, RT_tag>::type result_type;
- typedef typename Get_type<R, Point_tag>::type argument_type;
-
- result_type operator()(argument_type const& a)const{
- return LA::dot_product(a,a);
- }
-};
-
-template<class R_> struct Orientation_of_vectors {
- CGAL_FUNCTOR_INIT_IGNORE(Orientation_of_vectors)
- typedef R_ R;
- typedef typename R::Vector_cartesian_const_iterator first_argument_type;
- typedef typename R::Vector_cartesian_const_iterator second_argument_type;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename R::LA_vector LA;
-
- template<class Iter>
- result_type operator()(Iter const& f, Iter const& e) const {
- return LA::determinant_of_iterators_to_vectors(f,e);
- }
-};
-
-template<class R_> struct Orientation_of_points {
- CGAL_FUNCTOR_INIT_IGNORE(Orientation_of_points)
- typedef R_ R;
- typedef typename R::Point_cartesian_const_iterator first_argument_type;
- typedef typename R::Point_cartesian_const_iterator second_argument_type;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename R::LA_vector LA;
-
- template<class Iter>
- result_type operator()(Iter const& f, Iter const& e) const {
- return LA::determinant_of_iterators_to_points(f,e);
- }
-};
-
-template<class R_> struct PV_dimension {
- CGAL_FUNCTOR_INIT_IGNORE(PV_dimension)
- typedef R_ R;
- typedef typename R::Vector_ argument_type;
- typedef int result_type;
- typedef typename R::LA_vector LA;
- typedef Tag_true Is_exact;
-
- template<class T>
- result_type operator()(T const& v) const {
- return LA::size_of_vector(v);
- }
-};
-
-template<class R_> struct Identity_functor {
- CGAL_FUNCTOR_INIT_IGNORE(Identity_functor)
- template<class T>
- T const& operator()(T const&t) const { return t; }
-};
-
-}
-} // namespace CGAL
-#endif // CGAL_CARTESIAN_LA_FUNCTORS_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_base.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_base.h
deleted file mode 100644
index 641bf8ae..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_base.h
+++ /dev/null
@@ -1,40 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_CARTESIAN_BASE_H
-#define CGAL_KERNEL_D_CARTESIAN_BASE_H
-
-#include <CGAL/basic.h>
-#include <CGAL/NewKernel_d/Cartesian_complete.h>
-#include <CGAL/NewKernel_d/Cartesian_LA_base.h>
-
-namespace CGAL {
-#define CGAL_BASE \
- Cartesian_LA_base_d< FT_, Dim_ >
-template < typename FT_, typename Dim_, typename Derived_=Default>
-struct Cartesian_base_d : public CGAL_BASE
-{
- CGAL_CONSTEXPR Cartesian_base_d(){}
- CGAL_CONSTEXPR Cartesian_base_d(int d):CGAL_BASE(d){}
-};
-#undef CGAL_BASE
-
-} //namespace CGAL
-
-#endif // CGAL_KERNEL_D_CARTESIAN_BASE_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_change_FT.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_change_FT.h
deleted file mode 100644
index e09c72d0..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_change_FT.h
+++ /dev/null
@@ -1,117 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_CARTESIAN_CHANGE_FT_H
-#define CGAL_KERNEL_D_CARTESIAN_CHANGE_FT_H
-
-#include <CGAL/basic.h>
-#include <CGAL/NT_converter.h>
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/NewKernel_d/Cartesian_complete.h>
-
-namespace CGAL {
-
-template < typename Base_, typename FT_, typename LA_=CGAL::LA_eigen<FT_,typename Base_::Default_ambient_dimension> >
-struct Cartesian_change_FT_base : public
- Base_
-{
- CGAL_CONSTEXPR Cartesian_change_FT_base(){}
- CGAL_CONSTEXPR Cartesian_change_FT_base(int d):Base_(d){}
-
- typedef Cartesian_change_FT_base Self;
- typedef Base_ Kernel_base;
- typedef LA_ LA;
-
- template <class T, class D=void> struct Type : Inherit_type<Base_, T> {};
- template <class D> struct Type <FT_tag, D> { typedef FT_ type; };
- template <class D> struct Type <RT_tag, D> { typedef FT_ type; };
-
- typedef NT_converter<typename Get_type<Kernel_base, FT_tag>::type,FT_> FT_converter;
- typedef transforming_iterator<FT_converter,typename Kernel_base::Point_cartesian_const_iterator> Point_cartesian_const_iterator;
- typedef transforming_iterator<FT_converter,typename Kernel_base::Vector_cartesian_const_iterator> Vector_cartesian_const_iterator;
- //FIXME: use Iterator_list!
- /*
- template<class T,bool=CGAL_BOOSTD is_same<typename iterator_tag_traits<T>::value_tag,FT_tag>::value>
- struct Iterator : Get_type<Kernel_base,T> {};
- template<class T> struct Iterator<T,true> {
- typedef transforming_iterator<FT_converter,typename Get_type<Kernel_base,T>::type> type;
- };
- */
-
- template<class Tag_,class Type_>
- struct Construct_cartesian_const_iterator_ {
- typedef typename Get_functor<Kernel_base, Tag_>::type Functor_base;
- Construct_cartesian_const_iterator_(){}
- Construct_cartesian_const_iterator_(Self const&r):f(r){}
- Functor_base f;
- typedef Type_ result_type;
- template<class T>
- result_type operator()(T const& v, Begin_tag)const{
- return make_transforming_iterator(f(v,Begin_tag()),FT_converter());
- }
- template<class T>
- result_type operator()(T const& v, End_tag)const{
- return make_transforming_iterator(f(v,End_tag()),FT_converter());
- }
- };
- typedef Construct_cartesian_const_iterator_<Construct_ttag<Point_cartesian_const_iterator_tag>,Point_cartesian_const_iterator> Construct_point_cartesian_const_iterator;
- typedef Construct_cartesian_const_iterator_<Construct_ttag<Vector_cartesian_const_iterator_tag>,Vector_cartesian_const_iterator> Construct_vector_cartesian_const_iterator;
-
- template<class Tag_>
- struct Compute_cartesian_coordinate {
- typedef typename Get_functor<Kernel_base, Tag_>::type Functor_base;
- Compute_cartesian_coordinate(){}
- Compute_cartesian_coordinate(Self const&r):f(r){}
- Functor_base f;
- typedef FT_ result_type;
- template<class Obj_>
- result_type operator()(Obj_ const& v,int i)const{
- return FT_converter()(f(v,i));
- }
- };
-
- template<class T,class U=void,class=typename Get_functor_category<Cartesian_change_FT_base,T>::type> struct Functor :
- Inherit_functor<Kernel_base,T,U> { };
- template<class T,class U> struct Functor<T,U,Compute_tag> { };
- template<class T,class U> struct Functor<T,U,Predicate_tag> { };
- template<class D> struct Functor<Compute_point_cartesian_coordinate_tag,D,Compute_tag> {
- typedef Compute_cartesian_coordinate<Compute_point_cartesian_coordinate_tag> type;
- };
- template<class D> struct Functor<Compute_vector_cartesian_coordinate_tag,D,Compute_tag> {
- typedef Compute_cartesian_coordinate<Compute_vector_cartesian_coordinate_tag> type;
- };
- template<class D> struct Functor<Construct_ttag<Point_cartesian_const_iterator_tag>,D,Construct_iterator_tag> {
- typedef Construct_point_cartesian_const_iterator type;
- };
- template<class D> struct Functor<Construct_ttag<Vector_cartesian_const_iterator_tag>,D,Construct_iterator_tag> {
- typedef Construct_vector_cartesian_const_iterator type;
- };
-};
-
-template < typename Base_, typename FT_>
-struct Cartesian_change_FT : public
- Cartesian_change_FT_base<Base_,FT_>
-{
- CGAL_CONSTEXPR Cartesian_change_FT(){}
- CGAL_CONSTEXPR Cartesian_change_FT(int d):Cartesian_change_FT_base<Base_,FT_>(d){}
-};
-
-} //namespace CGAL
-
-#endif // CGAL_KERNEL_D_CARTESIAN_CHANGE_FT_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_complete.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_complete.h
deleted file mode 100644
index ef8921db..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_complete.h
+++ /dev/null
@@ -1,33 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_CARTESIAN_COMPLETE_H
-#define CGAL_KERNEL_D_CARTESIAN_COMPLETE_H
-
-#include <CGAL/NewKernel_d/function_objects_cartesian.h>
-#include <CGAL/NewKernel_d/Cartesian_per_dimension.h>
-#include <CGAL/NewKernel_d/Types/Segment.h>
-#include <CGAL/NewKernel_d/Types/Sphere.h>
-#include <CGAL/NewKernel_d/Types/Hyperplane.h>
-#include <CGAL/NewKernel_d/Types/Aff_transformation.h>
-#include <CGAL/NewKernel_d/Types/Line.h>
-#include <CGAL/NewKernel_d/Types/Ray.h>
-#include <CGAL/NewKernel_d/Types/Iso_box.h>
-
-#endif // CGAL_KERNEL_D_CARTESIAN_COMPLETE_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_filter_K.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_filter_K.h
deleted file mode 100644
index 179e97bf..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_filter_K.h
+++ /dev/null
@@ -1,79 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_CARTESIAN_FILTER_K_H
-#define CGAL_KERNEL_D_CARTESIAN_FILTER_K_H
-
-#include <CGAL/basic.h>
-#include <CGAL/NewKernel_d/KernelD_converter.h>
-#include <CGAL/NewKernel_d/Filtered_predicate2.h>
-#include <boost/mpl/if.hpp>
-#include <boost/mpl/and.hpp>
-
-namespace CGAL {
-
-template < typename Base_, typename AK_, typename EK_ >
-struct Cartesian_filter_K : public Base_,
- private Store_kernel<AK_>, private Store_kernel2<EK_>
-{
- CGAL_CONSTEXPR Cartesian_filter_K(){}
- CGAL_CONSTEXPR Cartesian_filter_K(int d):Base_(d){}
- //FIXME: or do we want an instance of AK and EK belonging to this kernel,
- //instead of a reference to external ones?
- CGAL_CONSTEXPR Cartesian_filter_K(AK_ const&a,EK_ const&b):Base_(),Store_kernel<AK_>(a),Store_kernel2<EK_>(b){}
- CGAL_CONSTEXPR Cartesian_filter_K(int d,AK_ const&a,EK_ const&b):Base_(d),Store_kernel<AK_>(a),Store_kernel2<EK_>(b){}
- typedef Base_ Kernel_base;
- typedef AK_ AK;
- typedef EK_ EK;
- typedef typename Store_kernel<AK_>::reference_type AK_rt;
- AK_rt approximate_kernel()const{return this->kernel();}
- typedef typename Store_kernel2<EK_>::reference2_type EK_rt;
- EK_rt exact_kernel()const{return this->kernel2();}
-
- // MSVC is too dumb to perform the empty base optimization.
- typedef boost::mpl::and_<
- internal::Do_not_store_kernel<Kernel_base>,
- internal::Do_not_store_kernel<AK>,
- internal::Do_not_store_kernel<EK> > Do_not_store_kernel;
-
- //TODO: C2A/C2E could be able to convert *this into this->kernel() or this->kernel2().
- typedef KernelD_converter<Kernel_base,AK> C2A;
- typedef KernelD_converter<Kernel_base,EK> C2E;
-
- // fix the types
- // TODO: only fix some types, based on some criterion?
- template<class T> struct Type : Get_type<Kernel_base,T> {};
-
- template<class T,class D=void,class=typename Get_functor_category<Cartesian_filter_K,T>::type> struct Functor :
- Inherit_functor<Kernel_base,T,D> {};
- template<class T,class D> struct Functor<T,D,Predicate_tag> {
- typedef typename Get_functor<AK, T>::type AP;
- typedef typename Get_functor<EK, T>::type EP;
- typedef Filtered_predicate2<EP,AP,C2E,C2A> type;
- };
-// TODO:
-// template<class T> struct Functor<T,No_filter_tag,Predicate_tag> :
-// Kernel_base::template Functor<T,No_filter_tag> {};
-// TODO:
-// detect when Less_cartesian_coordinate doesn't need filtering
-};
-
-} //namespace CGAL
-
-#endif // CGAL_KERNEL_D_CARTESIAN_FILTER_K_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_filter_NT.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_filter_NT.h
deleted file mode 100644
index c390a55c..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_filter_NT.h
+++ /dev/null
@@ -1,93 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_CARTESIAN_FILTER_NT_H
-#define CGAL_KERNEL_D_CARTESIAN_FILTER_NT_H
-
-#include <CGAL/basic.h>
-#include <CGAL/NewKernel_d/Cartesian_change_FT.h>
-#include <CGAL/internal/Exact_type_selector.h>
-
-namespace CGAL {
-
-template < typename Base_ >
-struct Cartesian_filter_NT : public Base_
-{
- CGAL_CONSTEXPR Cartesian_filter_NT(){}
- CGAL_CONSTEXPR Cartesian_filter_NT(int d):Base_(d){}
- typedef Base_ Kernel_base;
- typedef Cartesian_change_FT<Kernel_base,Interval_nt_advanced> K1;
- typedef typename internal::Exact_field_selector<typename Get_type<Kernel_base, FT_tag>::type>::Type Exact_nt;
- typedef Cartesian_change_FT<Kernel_base,Exact_nt> K2;
-
- template<class T,class D=void,class=typename Get_functor_category<Cartesian_filter_NT,T>::type> struct Functor :
- Inherit_functor<Kernel_base,T,D> {};
- template<class T,class D> struct Functor<T,D,Predicate_tag> {
- struct type {
- //TODO: use compression (derive from a compressed_pair?)
- typedef typename Get_functor<K1, T>::type P1; P1 p1;
- typedef typename Get_functor<K2, T>::type P2; P2 p2;
- typedef typename P2::result_type result_type;
- type(){}
- type(Cartesian_filter_NT const&k):p1(reinterpret_cast<K1 const&>(k)),p2(reinterpret_cast<K2 const&>(k)){}
- //FIXME: if predicate's constructor takes a kernel as argument, how do we translate that? reinterpret_cast is really ugly and possibly unsafe.
-
-#ifdef CGAL_CXX11
- template<class...U> result_type operator()(U&&...u)const{
- {
- Protect_FPU_rounding<true> p;
- try {
- typename P1::result_type res=p1(u...); // don't forward as u may be reused
- if(is_certain(res)) return get_certain(res);
- } catch (Uncertain_conversion_exception) {}
- }
- return p2(std::forward<U>(u)...);
- }
-#else
- result_type operator()()const{ // does it make sense to have 0 argument?
- {
- Protect_FPU_rounding<true> p;
- try {
- typename P1::result_type res=p1();
- if(is_certain(res)) return get_certain(res);
- } catch (Uncertain_conversion_exception) {}
- }
- return p2();
- }
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> result_type operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t))const{ \
- { \
- Protect_FPU_rounding<true> p; \
- try { \
- typename P1::result_type res=p1(BOOST_PP_ENUM_PARAMS(N,t)); \
- if(is_certain(res)) return get_certain(res); \
- } catch (Uncertain_conversion_exception) {} \
- } \
- return p2(BOOST_PP_ENUM_PARAMS(N,t)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-
-#endif
- };
- };
-};
-
-} //namespace CGAL
-
-#endif // CGAL_KERNEL_D_CARTESIAN_FILTER_NT_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_per_dimension.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_per_dimension.h
deleted file mode 100644
index 179f7319..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_per_dimension.h
+++ /dev/null
@@ -1,33 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_CARTESIAN_PER_DIM_H
-#define CGAL_KD_CARTESIAN_PER_DIM_H
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/predicates/sign_of_determinant.h>
-
-// Should probably disappear.
-
-namespace CGAL {
-template <class Dim_, class R_, class Derived_>
-struct Cartesian_per_dimension : public R_ {};
-}
-
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_static_filters.h b/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_static_filters.h
deleted file mode 100644
index 693e962a..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Cartesian_static_filters.h
+++ /dev/null
@@ -1,95 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_CARTESIAN_STATIC_FILTERS_H
-#define CGAL_KD_CARTESIAN_STATIC_FILTERS_H
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/internal/Static_filters/tools.h> // bug, should be included by the next one
-#include <CGAL/internal/Static_filters/Orientation_2.h>
-#include <boost/mpl/if.hpp>
-
-namespace CGAL {
-namespace SFA { // static filter adapter
-// Note that this would be quite a bit simpler without stateful kernels
-template <class Base_,class R_> struct Orientation_of_points_2 : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Orientation_of_points_2)
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, Orientation_tag>::type result_type;
- typedef typename Get_type<R_, FT_tag>::type FT;
- typedef typename Get_functor<R_, Compute_point_cartesian_coordinate_tag>::type CC;
- typedef typename Get_functor<Base_, Orientation_of_points_tag>::type Orientation_base;
- // TODO: Move this out for easy reuse
- struct Adapter {
- struct Point_2 {
- R_ const&r; CC const&c; Point const& p;
- Point_2(R_ const&r_, CC const&c_, Point const&p_):r(r_),c(c_),p(p_){}
- // use result_of instead?
- typename CC::result_type x()const{return c(p,0);}
- typename CC::result_type y()const{return c(p,1);}
- };
- struct Vector_2 {};
- struct Circle_2 {};
- struct Orientation_2 {
- typedef typename Orientation_of_points_2::result_type result_type;
- result_type operator()(Point_2 const&A, Point_2 const&B, Point_2 const&C)const{
- Point const* t[3]={&A.p,&B.p,&C.p};
- return Orientation_base(A.r)(make_transforming_iterator<Dereference_functor>(t+0),make_transforming_iterator<Dereference_functor>(t+3));
- }
- };
- };
- template<class Iter> result_type operator()(Iter f, Iter CGAL_assertion_code(e))const{
- CC c(this->kernel());
- Point const& A=*f;
- Point const& B=*++f;
- Point const& C=*++f;
- CGAL_assertion(++f==e);
- typedef typename Adapter::Point_2 P;
- return typename internal::Static_filters_predicates::Orientation_2<Adapter>()(P(this->kernel(),c,A),P(this->kernel(),c,B),P(this->kernel(),c,C));
- }
-};
-}
-
-template <class Dim_ /* should be implicit */, class R_, class Derived_=Default>
-struct Cartesian_static_filters : public R_ {
- CGAL_CONSTEXPR Cartesian_static_filters(){}
- CGAL_CONSTEXPR Cartesian_static_filters(int d):R_(d){}
-};
-
-template <class R_, class Derived_>
-struct Cartesian_static_filters<Dimension_tag<2>, R_, Derived_> : public R_ {
- CGAL_CONSTEXPR Cartesian_static_filters(){}
- CGAL_CONSTEXPR Cartesian_static_filters(int d):R_(d){}
- typedef Cartesian_static_filters<Dimension_tag<2>, R_, Derived_> Self;
- typedef typename Default::Get<Derived_,Self>::type Derived;
- template <class T, class=void> struct Functor : Inherit_functor<R_, T> {};
- template <class D> struct Functor <Orientation_of_points_tag,D> {
- typedef
- //typename boost::mpl::if_ <
- //boost::is_same<D,No_filter_tag>,
- //typename Get_functor<R_, Orientation_of_points_tag>::type,
- SFA::Orientation_of_points_2<R_,Derived>
- // >::type
- type;
- };
-};
-
-}
-
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Coaffine.h b/include/gudhi_patches/CGAL/NewKernel_d/Coaffine.h
deleted file mode 100644
index 43015d24..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Coaffine.h
+++ /dev/null
@@ -1,330 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_COAFFINE_H
-#define CGAL_KD_COAFFINE_H
-#include <vector>
-#include <algorithm>
-#include <iterator>
-#include <CGAL/Dimension.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-
-namespace CGAL {
-namespace CartesianDKernelFunctors {
-struct Flat_orientation {
- std::vector<int> proj;
- std::vector<int> rest;
- bool reverse;
-};
-
-// For debugging purposes
-inline std::ostream& operator<< (std::ostream& o, Flat_orientation const& f) {
- o << "Proj: ";
- for(std::vector<int>::const_iterator i=f.proj.begin();
- i!=f.proj.end(); ++i)
- o << *i << ' ';
- o << "\nRest: ";
- for(std::vector<int>::const_iterator i=f.rest.begin();
- i!=f.rest.end(); ++i)
- o << *i << ' ';
- o << "\nInv: " << f.reverse;
- return o << '\n';
-}
-
-namespace internal {
-namespace coaffine {
-template<class Mat>
-inline void debug_matrix(std::ostream& o, Mat const&mat) {
- for(int i=0;i<mat.rows();++i){
- for(int j=0;j<mat.cols();++j){
- o<<mat(i,j)<<' ';
- }
- o<<'\n';
- }
-}
-}
-}
-
-template<class R_> struct Construct_flat_orientation : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_flat_orientation)
- typedef R_ R;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Increment_dimension<typename R::Max_ambient_dimension>::type Dplusone;
- typedef typename R::LA::template Rebind_dimension<Dynamic_dimension_tag,Dplusone>::Other LA;
- typedef typename LA::Square_matrix Matrix;
- typedef typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type CCC;
- typedef typename Get_functor<R, Point_dimension_tag>::type PD;
- typedef Flat_orientation result_type;
-
- // This implementation is going to suck. Maybe we should push the
- // functionality into LA. And we should check (in debug mode) that
- // the points are affinely independent.
- template<class Iter>
- result_type operator()(Iter f, Iter e)const{
- Iter f_save = f;
- PD pd (this->kernel());
- CCC ccc (this->kernel());
- int dim = pd(*f);
- Matrix coord (dim+1, dim+1); // use distance(f,e)? This matrix doesn't need to be square.
- int col = 0;
- Flat_orientation o;
- std::vector<int>& proj=o.proj;
- std::vector<int>& rest=o.rest; rest.reserve(dim+1);
- for(int i=0; i<dim+1; ++i) rest.push_back(i);
- for( ; f != e ; ++col, ++f ) {
- //std::cerr << "(*f)[0]=" << (*f)[0] << std::endl;
- Point const&p=*f;
- // use a coordinate iterator instead?
- for(int i=0; i<dim; ++i) coord(col, i) = ccc(p, i);
- coord(col,dim)=1;
- int d = (int)proj.size()+1;
- Matrix m (d, d);
- // Fill the matrix with what we already have
- for(int i=0; i<d; ++i)
- for(int j=0; j<d-1; ++j)
- m(i,j) = coord(i, proj[j]);
- // Try to complete with any other coordinate
- // TODO: iterate on rest by the end, or use a (forward_)list.
- for(std::vector<int>::iterator it=rest.begin();;++it) {
- CGAL_assertion(it!=rest.end());
- for(int i=0; i<d; ++i) m(i,d-1) = coord(i, *it);
- if(LA::sign_of_determinant(m)!=0) {
- proj.push_back(*it);
- rest.erase(it);
- break;
- }
- }
- }
- std::sort(proj.begin(),proj.end());
- typename Get_functor<R, In_flat_orientation_tag>::type ifo(this->kernel());
- o.reverse = false;
- o.reverse = ifo(o, f_save, e) != CGAL::POSITIVE;
- return o;
- }
-};
-
-template<class R_> struct Contained_in_affine_hull : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Contained_in_affine_hull)
- typedef R_ R;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Bool_tag>::type result_type;
- typedef typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type CCC;
- typedef typename Get_functor<R, Point_dimension_tag>::type PD;
- //typedef typename Increment_dimension<typename R::Default_ambient_dimension>::type D1;
- //typedef typename Increment_dimension<typename R::Max_ambient_dimension>::type D2;
- //typedef typename R::LA::template Rebind_dimension<D1,D2>::Other LA;
- typedef typename Increment_dimension<typename R::Max_ambient_dimension>::type Dplusone;
- typedef typename R::LA::template Rebind_dimension<Dynamic_dimension_tag,Dplusone>::Other LA;
- typedef typename LA::Square_matrix Matrix;
-
- // mostly copied from Construct_flat_orientation. TODO: dedup this code or use LA.
- template<class Iter>
- result_type operator()(Iter f, Iter e, Point const&x) const {
- // FIXME: are the points in (f,e) required to be affinely independent?
- PD pd (this->kernel());
- CCC ccc (this->kernel());
- int dim=pd(*f);
- Matrix coord (dim+1, dim+1); // use distance
- int col = 0;
- std::vector<int> proj;
- std::vector<int> rest; rest.reserve(dim+1);
- for(int i=0; i<dim+1; ++i) rest.push_back(i);
- for( ; f != e ; ++col, ++f ) {
- Point const&p=*f;
- for(int i=0; i<dim; ++i) coord(col, i) = ccc(p, i);
- coord(col,dim)=1;
- int d = (int)proj.size()+1;
- Matrix m (d, d);
- for(int i=0; i<d; ++i)
- for(int j=0; j<d-1; ++j)
- m(i,j) = coord(i, proj[j]);
- for(std::vector<int>::iterator it=rest.begin();it!=rest.end();++it) {
- for(int i=0; i<d; ++i) m(i,d-1) = coord(i, *it);
- if(LA::sign_of_determinant(m)!=0) {
- proj.push_back(*it);
- rest.erase(it);
- break;
- }
- }
- }
- for(int i=0; i<dim; ++i) coord(col, i) = ccc(x, i);
- coord(col,dim)=1;
- int d = (int)proj.size()+1;
- Matrix m (d, d);
- for(int i=0; i<d; ++i)
- for(int j=0; j<d-1; ++j)
- m(i,j) = coord(i, proj[j]);
- for(std::vector<int>::iterator it=rest.begin();it!=rest.end();++it) {
- for(int i=0; i<d; ++i) m(i,d-1) = coord(i, *it);
- if(LA::sign_of_determinant(m)!=0) return false;
- }
- return true;
- }
-};
-
-template<class R_> struct In_flat_orientation : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(In_flat_orientation)
- typedef R_ R;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename Increment_dimension<typename R::Default_ambient_dimension>::type D1;
- typedef typename Increment_dimension<typename R::Max_ambient_dimension>::type D2;
- typedef typename R::LA::template Rebind_dimension<D1,D2>::Other LA;
- typedef typename LA::Square_matrix Matrix;
-
- template<class Iter>
- result_type operator()(Flat_orientation const&o, Iter f, Iter e) const {
- // TODO: work in the projection instead of the ambient space.
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- int d=pd(*f);
- Matrix m(d+1,d+1);
- int i=0;
- for(;f!=e;++f,++i) {
- Point const& p=*f;
- m(i,0)=1;
- for(int j=0;j<d;++j){
- m(i,j+1)=c(p,j);
- }
- }
- for(std::vector<int>::const_iterator it = o.rest.begin(); it != o.rest.end() /* i<d+1 */; ++i, ++it) {
- m(i,0)=1;
- for(int j=0;j<d;++j){
- m(i,j+1)=0; // unneeded if the matrix is initialized to 0
- }
- if(*it != d) m(i,1+*it)=1;
- }
-
- result_type ret = LA::sign_of_determinant(CGAL_MOVE(m));
- if(o.reverse) ret=-ret;
- return ret;
- }
-};
-
-template<class R_> struct In_flat_side_of_oriented_sphere : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(In_flat_side_of_oriented_sphere)
- typedef R_ R;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename Increment_dimension<typename R::Default_ambient_dimension,2>::type D1;
- typedef typename Increment_dimension<typename R::Max_ambient_dimension,2>::type D2;
- typedef typename R::LA::template Rebind_dimension<D1,D2>::Other LA;
- typedef typename LA::Square_matrix Matrix;
-
- template<class Iter>
- result_type operator()(Flat_orientation const&o, Iter f, Iter e, Point const&x) const {
- // TODO: can't work in the projection, but we should at least remove the row of 1s.
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- int d=pd(*f);
- Matrix m(d+2,d+2);
- int i=0;
- for(;f!=e;++f,++i) {
- Point const& p=*f;
- m(i,0)=1;
- m(i,d+1)=0;
- for(int j=0;j<d;++j){
- m(i,j+1)=c(p,j);
- m(i,d+1)+=CGAL_NTS square(m(i,j+1));
- }
- }
- for(std::vector<int>::const_iterator it = o.rest.begin(); it != o.rest.end() /* i<d+1 */; ++i, ++it) {
- m(i,0)=1;
- for(int j=0;j<d;++j){
- m(i,j+1)=0; // unneeded if the matrix is initialized to 0
- }
- if(*it != d) m(i,d+1)=m(i,1+*it)=1;
- else m(i,d+1)=0;
- }
- m(d+1,0)=1;
- m(d+1,d+1)=0;
- for(int j=0;j<d;++j){
- m(d+1,j+1)=c(x,j);
- m(d+1,d+1)+=CGAL_NTS square(m(d+1,j+1));
- }
-
- result_type ret = -LA::sign_of_determinant(CGAL_MOVE(m));
- if(o.reverse) ret=-ret;
- return ret;
- }
-};
-
-template<class R_> struct In_flat_power_side_of_power_sphere_raw : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(In_flat_power_side_of_power_sphere_raw)
- typedef R_ R;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename Increment_dimension<typename R::Default_ambient_dimension,2>::type D1;
- typedef typename Increment_dimension<typename R::Max_ambient_dimension,2>::type D2;
- typedef typename R::LA::template Rebind_dimension<D1,D2>::Other LA;
- typedef typename LA::Square_matrix Matrix;
-
- template<class Iter, class IterW, class Wt>
- result_type operator()(Flat_orientation const&o, Iter f, Iter e, IterW fw, Point const&x, Wt const&w) const {
- // TODO: can't work in the projection, but we should at least remove the row of 1s.
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- int d=pd(*f);
- Matrix m(d+2,d+2);
- int i=0;
- for(;f!=e;++f,++fw,++i) {
- Point const& p=*f;
- m(i,0)=1;
- m(i,d+1)=-*fw;
- for(int j=0;j<d;++j){
- m(i,j+1)=c(p,j);
- m(i,d+1)+=CGAL_NTS square(m(i,j+1));
- }
- }
- for(std::vector<int>::const_iterator it = o.rest.begin(); it != o.rest.end() /* i<d+1 */; ++i, ++it) {
- m(i,0)=1;
- for(int j=0;j<d;++j){
- m(i,j+1)=0; // unneeded if the matrix is initialized to 0
- }
- if(*it != d) m(i,d+1)=m(i,1+*it)=1;
- else m(i,d+1)=0;
- }
- m(d+1,0)=1;
- m(d+1,d+1)=-w;
- for(int j=0;j<d;++j){
- m(d+1,j+1)=c(x,j);
- m(d+1,d+1)+=CGAL_NTS square(m(d+1,j+1));
- }
-
- result_type ret = -LA::sign_of_determinant(CGAL_MOVE(m));
- if(o.reverse) ret=-ret;
- return ret;
- }
-};
-
-
-}
-CGAL_KD_DEFAULT_TYPE(Flat_orientation_tag,(CGAL::CartesianDKernelFunctors::Flat_orientation),(),());
-CGAL_KD_DEFAULT_FUNCTOR(In_flat_orientation_tag,(CartesianDKernelFunctors::In_flat_orientation<K>),(Point_tag),(Compute_point_cartesian_coordinate_tag,Point_dimension_tag));
-CGAL_KD_DEFAULT_FUNCTOR(In_flat_side_of_oriented_sphere_tag,(CartesianDKernelFunctors::In_flat_side_of_oriented_sphere<K>),(Point_tag),(Compute_point_cartesian_coordinate_tag,Point_dimension_tag));
-CGAL_KD_DEFAULT_FUNCTOR(In_flat_power_side_of_power_sphere_raw_tag,(CartesianDKernelFunctors::In_flat_power_side_of_power_sphere_raw<K>),(Point_tag),(Compute_point_cartesian_coordinate_tag,Point_dimension_tag));
-CGAL_KD_DEFAULT_FUNCTOR(Construct_flat_orientation_tag,(CartesianDKernelFunctors::Construct_flat_orientation<K>),(Point_tag),(Compute_point_cartesian_coordinate_tag,Point_dimension_tag,In_flat_orientation_tag));
-CGAL_KD_DEFAULT_FUNCTOR(Contained_in_affine_hull_tag,(CartesianDKernelFunctors::Contained_in_affine_hull<K>),(Point_tag),(Compute_point_cartesian_coordinate_tag,Point_dimension_tag));
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Define_kernel_types.h b/include/gudhi_patches/CGAL/NewKernel_d/Define_kernel_types.h
deleted file mode 100644
index 6a40515b..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Define_kernel_types.h
+++ /dev/null
@@ -1,50 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_DEFINE_KERNEL_TYPES_H
-#define CGAL_DEFINE_KERNEL_TYPES_H
-#include <CGAL/config.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/typeset.h>
-#ifdef CGAL_CXX11
-#include <type_traits>
-#else
-#include <boost/type_traits.hpp>
-#endif
-
-namespace CGAL {
- namespace internal {
- template<class K,class Tag_,bool=iterator_tag_traits<Tag_>::is_iterator>
- struct Type_or_iter : K::template Type<Tag_> {};
- template<class K,class Tag_>
- struct Type_or_iter<K, Tag_, true> : K::template Iterator<Tag_> {};
- }
- template<class K, class Base=K, class List=typename typeset_union<typename K::Object_list,typename K::Iterator_list>::type> struct Define_kernel_types;
- template<class K, class Base>
- struct Define_kernel_types <K, Base, typeset<> > : Base {};
- template<class K>
- struct Define_kernel_types <K, void, typeset<> > {};
- template<class K, class Base, class List>
- struct Define_kernel_types :
- Typedef_tag_type<typename List::head,
- typename internal::Type_or_iter<K,typename List::head>::type,
- Define_kernel_types<K, Base, typename List::tail>
- > {};
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Dimension_base.h b/include/gudhi_patches/CGAL/NewKernel_d/Dimension_base.h
deleted file mode 100644
index be875e63..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Dimension_base.h
+++ /dev/null
@@ -1,49 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_DIMENSION_BASE_h
-#define CGAL_KD_DIMENSION_BASE_h
-#include <CGAL/Dimension.h>
-#include <CGAL/assertions.h>
-#include <CGAL/NewKernel_d/utils.h>
-namespace CGAL {
-struct Store_dimension_base {
- //TODO: add some assertions
- Store_dimension_base(int dim=UNKNOWN_DIMENSION):dim_(dim){}
- int dimension()const{return dim_;}
- void set_dimension(int dim){dim_=dim;}
- private:
- int dim_;
-};
-template<class=Dynamic_dimension_tag>
-struct Dimension_base {
- Dimension_base(int = UNKNOWN_DIMENSION){}
- int dimension() const { return UNKNOWN_DIMENSION; }
- void set_dimension(int) {}
-};
-template<int dim_>
-struct Dimension_base<Dimension_tag<dim_> > {
- Dimension_base(){}
- Dimension_base(int CGAL_assertion_code(dim)){CGAL_assertion(dim_==dim);}
- int dimension()const{return dim_;}
- void set_dimension(int dim){CGAL_assertion(dim_==dim);}
-};
-}
-#endif
-
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Filtered_predicate2.h b/include/gudhi_patches/CGAL/NewKernel_d/Filtered_predicate2.h
deleted file mode 100644
index 1a6a67bc..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Filtered_predicate2.h
+++ /dev/null
@@ -1,137 +0,0 @@
-// Copyright (c) 2001-2005 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-//
-// Author(s) : Sylvain Pion
-
-#ifndef CGAL_FILTERED_PREDICATE2_H
-#define CGAL_FILTERED_PREDICATE2_H
-
-#include <string>
-#include <CGAL/config.h>
-#include <CGAL/Interval_nt.h>
-#include <CGAL/Uncertain.h>
-#include <CGAL/Profile_counter.h>
-#include <CGAL/NewKernel_d/store_kernel.h>
-#include <boost/preprocessor.hpp>
-
-namespace CGAL {
-
-// This template class is a wrapper that implements the filtering for any
-// predicate (dynamic filters with IA).
-
-// TODO :
-// - each predicate in the default kernel should define a tag that says if it
-// wants to be filtered or not (=> all homogeneous predicate define this
-// tag). We could even test-suite that automatically. It makes a strong
-// new requirement on the kernel though...
-// Could be done with a traits mechanism ?
-// A default template could use the current IA, but other tags or whatever
-// could specify no filtering at all, or static filtering...
-// - same thing for constructions => virtual operator() ?
-// - similarly, constructions should have a tag saying if they can throw or
-// not, or we let all this up to the compiler optimizer to figure out ?
-// - Some caching could be done at the Point_2 level.
-
-
-template <class EP, class AP, class C2E, class C2A, bool Protection = true>
-class Filtered_predicate2
-{
-//TODO: pack (at least use a tuple)
-//FIXME: is it better to store those, or just store enough to recreate them
-//(i.e. possibly references to the kernels)?
- EP ep;
- AP ap;
- C2E c2e;
- C2A c2a;
-
- typedef typename AP::result_type Ares;
-
-public:
-
- typedef AP Approximate_predicate;
- typedef EP Exact_predicate;
- typedef C2E To_exact_converter;
- typedef C2A To_approximate_converter;
-
- // FIXME: should use result_of, see emails by Nico
- typedef typename EP::result_type result_type;
- // AP::result_type must be convertible to EP::result_type.
-
- Filtered_predicate2()
- {}
-
- template <class K>
- Filtered_predicate2(const K& k)
- : ep(k.exact_kernel()), ap(k.approximate_kernel()), c2e(k,k.exact_kernel()), c2a(k,k.approximate_kernel())
- {}
-
-#ifdef CGAL_CXX11
- template <typename... Args>
- result_type
- operator()(Args&&... args) const
- {
- CGAL_BRANCH_PROFILER(std::string(" failures/calls to : ") + std::string(CGAL_PRETTY_FUNCTION), tmp);
- // Protection is outside the try block as VC8 has the CGAL_CFG_FPU_ROUNDING_MODE_UNWINDING_VC_BUG
- {
- Protect_FPU_rounding<Protection> p;
- try
- {
- // No forward here, the arguments may still be needed
- Ares res = ap(c2a(args)...);
- if (is_certain(res))
- return get_certain(res);
- }
- catch (Uncertain_conversion_exception) {}
- }
- CGAL_BRANCH_PROFILER_BRANCH(tmp);
- Protect_FPU_rounding<!Protection> p(CGAL_FE_TONEAREST);
- return ep(c2e(std::forward<Args>(args))...);
- }
-#else
-
-#define CGAL_VAR(Z,N,C) C(a##N)
-#define CGAL_CODE(Z,N,_) \
- template <BOOST_PP_ENUM_PARAMS(N,class A)> \
- result_type \
- operator()(BOOST_PP_ENUM_BINARY_PARAMS(N, A, const& a)) const \
- { \
- CGAL_BRANCH_PROFILER(std::string(" failures/calls to : ") + std::string(CGAL_PRETTY_FUNCTION), tmp); \
- { \
- Protect_FPU_rounding<Protection> p; \
- try \
- { \
- Ares res = ap(BOOST_PP_ENUM(N,CGAL_VAR,c2a)); \
- if (is_certain(res)) \
- return get_certain(res); \
- } \
- catch (Uncertain_conversion_exception) {} \
- } \
- CGAL_BRANCH_PROFILER_BRANCH(tmp); \
- Protect_FPU_rounding<!Protection> p(CGAL_FE_TONEAREST); \
- return ep(BOOST_PP_ENUM(N,CGAL_VAR,c2e)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1, 10, CGAL_CODE, _ )
-#undef CGAL_CODE
-#undef CGAL_VAR
-
-#endif
-};
-
-} //namespace CGAL
-
-#endif // CGAL_FILTERED_PREDICATE2_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/KernelD_converter.h b/include/gudhi_patches/CGAL/NewKernel_d/KernelD_converter.h
deleted file mode 100644
index a8896976..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/KernelD_converter.h
+++ /dev/null
@@ -1,199 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_CARTESIAN_CONVERTER_H
-#define CGAL_KERNEL_D_CARTESIAN_CONVERTER_H
-
-#include <CGAL/basic.h>
-#include <CGAL/tuple.h>
-#include <CGAL/typeset.h>
-#include <CGAL/Object.h>
-#include <CGAL/Origin.h>
-#include <CGAL/NT_converter.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Kernel/mpl.h>
-#include <CGAL/is_iterator.h>
-#include <CGAL/transforming_iterator.h>
-#include <boost/utility/enable_if.hpp>
-#include <boost/mpl/if.hpp>
-#include <CGAL/NewKernel_d/store_kernel.h>
-#include <CGAL/NewKernel_d/Kernel_object_converter.h>
-
-namespace CGAL {
-namespace internal {
-// Reverses order, but that shouldn't matter.
-template<class K,class T> struct Map_taglist_to_typelist :
- Map_taglist_to_typelist<K,typename T::tail>::type
- ::template add<typename Get_type<K, typename T::head>::type>
-{};
-template<class K> struct Map_taglist_to_typelist<K,typeset<> > : typeset<> {};
-}
-
-template<class List = typeset<> >
-struct Object_converter {
- typedef Object result_type;
- template<class F>
- result_type operator()(Object const& o, F const& f) const {
- typedef typename List::head H;
- if (H const* ptr = object_cast<H>(&o))
- return make_object(f(*ptr));
- else
- return Object_converter<typename List::tail>()(o,f);
- }
-};
-template<>
-struct Object_converter <typeset<> > {
- typedef Object result_type;
- template<class F>
- result_type operator()(Object const&,F const&)const {
- CGAL_error_msg("Cartesiand_converter is unable to determine what is wrapped in the Object");
- return Object();
- }
-};
-
-
- //TODO: special case when K1==K2 (or they are very close?)
-template<class Final_, class K1, class K2, class List>
-class KernelD_converter_
-: public KernelD_converter_<Final_,K1,K2,typename List::tail>
-{
- typedef typename List::head Tag_;
- typedef typename List::tail Rest;
- typedef KernelD_converter_<Final_,K1,K2,Rest> Base;
- typedef typename Get_type<K1,Tag_>::type K1_Obj;
- typedef typename Get_type<K2,Tag_>::type K2_Obj;
- typedef typename Get_functor<K1, Convert_ttag<Tag_> >::type K1_Conv;
- typedef KO_converter<Tag_,K1,K2> KOC;
- typedef CGAL_BOOSTD is_same<K1_Conv, Null_functor> no_converter;
- typedef typename internal::Map_taglist_to_typelist<K1,Rest>::type::template contains<K1_Obj> duplicate;
-
- // Disable the conversion in some cases:
- struct Do_not_use{};
-
- // Explicit calls to boost::mpl functions to avoid parenthesis
- // warning on some versions of GCC
- typedef typename boost::mpl::if_ <
- // If Point==Vector, keep only one conversion
- boost::mpl::or_<boost::mpl::bool_<duplicate::value>,
- // For iterator objects, the default is make_transforming_iterator
- boost::mpl::bool_<(iterator_tag_traits<Tag_>::is_iterator && no_converter::value)> >,
- Do_not_use,K1_Obj>::type argument_type;
- //typedef typename KOC::argument_type K1_Obj;
- //typedef typename KOC::result_type K2_Obj;
- public:
- using Base::operator(); // don't use directly, just make it accessible to the next level
- K2_Obj helper(K1_Obj const& o,CGAL_BOOSTD true_type)const{
- return KOC()(this->myself().kernel(),this->myself().kernel2(),this->myself(),o);
- }
- K2_Obj helper(K1_Obj const& o,CGAL_BOOSTD false_type)const{
- return K1_Conv(this->myself().kernel())(this->myself().kernel2(),this->myself(),o);
- }
- K2_Obj operator()(argument_type const& o)const{
- return helper(o,no_converter());
- }
- template<class X,int=0> struct result:Base::template result<X>{};
- template<int i> struct result<Final_(argument_type),i> {typedef K2_Obj type;};
-};
-
-template<class Final_, class K1, class K2>
-class KernelD_converter_<Final_,K1,K2,typeset<> > {
- public:
- struct Do_not_use2{};
- void operator()(Do_not_use2)const{}
- template<class T> struct result;
- Final_& myself(){return *static_cast<Final_*>(this);}
- Final_ const& myself()const{return *static_cast<Final_ const*>(this);}
-};
-
-
-// TODO: use the intersection of Kn::Object_list.
-template<class K1, class K2, class List_=
-typename typeset_intersection<typename K1::Object_list, typename K2::Object_list>::type
-//typeset<Point_tag>::add<Vector_tag>::type/*::add<Segment_tag>::type*/
-> class KernelD_converter
- : public Store_kernel<K1>, public Store_kernel2<K2>,
- public KernelD_converter_<KernelD_converter<K1,K2,List_>,K1,K2,List_>
-{
- typedef KernelD_converter Self;
- typedef Self Final_;
- typedef KernelD_converter_<Self,K1,K2,List_> Base;
- typedef typename Get_type<K1, FT_tag>::type FT1;
- typedef typename Get_type<K2, FT_tag>::type FT2;
- typedef NT_converter<FT1, FT2> NTc;
- NTc c; // TODO: compressed storage as this is likely empty and the converter gets passed around (and stored in iterators)
-
- public:
- KernelD_converter(){}
- KernelD_converter(K1 const&a,K2 const&b):Store_kernel<K1>(a),Store_kernel2<K2>(b){}
-
- // For boost::result_of, used in transforming_iterator
- template<class T,int i=is_iterator<T>::value?42:0> struct result:Base::template result<T>{};
- template<class T> struct result<Final_(T),42> {
- typedef transforming_iterator<Final_,T> type;
- };
- template<int i> struct result<Final_(K1),i>{typedef K2 type;};
- template<int i> struct result<Final_(int),i>{typedef int type;};
- // Ideally the next 2 would come with Point_tag and Vector_tag, but that's hard...
- template<int i> struct result<Final_(Origin),i>{typedef Origin type;};
- template<int i> struct result<Final_(Null_vector),i>{typedef Null_vector type;};
- template<int i> struct result<Final_(Object),i>{typedef Object type;};
- template<int i> struct result<Final_(FT1),i>{typedef FT2 type;};
-
- using Base::operator();
- typename Store_kernel2<K2>::reference2_type operator()(K1 const&)const{return this->kernel2();}
- int operator()(int i)const{return i;}
- Origin operator()(Origin const&o)const{return o;}
- Null_vector operator()(Null_vector const&v)const{return v;}
- FT2 operator()(FT1 const&x)const{return c(x);}
- //RT2 operator()(typename First_if_different<RT1,FT1>::Type const&x)const{return cr(x);}
-
- typename Get_type<K2, Flat_orientation_tag>::type const&
- operator()(typename Get_type<K1, Flat_orientation_tag>::type const&o)const
- { return o; } // Both kernels should have the same, returning a reference should warn if not.
-
- template<class It>
- transforming_iterator<Final_,typename boost::enable_if<is_iterator<It>,It>::type>
- operator()(It const& it) const {
- return make_transforming_iterator(it,*this);
- }
-
- template<class T>
- //TODO: use decltype in C++11 instead of result
- std::vector<typename result<Final_(T)>::type>
- operator()(const std::vector<T>& v) const {
- return std::vector<typename result<Final_(T)>::type>(operator()(v.begin()),operator()(v.begin()));
- }
-
- //TODO: convert std::list and other containers?
-
- Object
- operator()(const Object &obj) const
- {
- typedef typename internal::Map_taglist_to_typelist<K1,List_>::type Possibilities;
- //TODO: add Empty, vector<Point>, etc to the list.
- return Object_converter<Possibilities>()(obj,*this);
- }
-
- //TODO: convert boost::variant
-
-};
-
-} //namespace CGAL
-
-#endif // CGAL_KERNEL_D_CARTESIAN_CONVERTER_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Kernel_2_interface.h b/include/gudhi_patches/CGAL/NewKernel_d/Kernel_2_interface.h
deleted file mode 100644
index fa30dff0..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Kernel_2_interface.h
+++ /dev/null
@@ -1,104 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_KERNEL_2_INTERFACE_H
-#define CGAL_KD_KERNEL_2_INTERFACE_H
-
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/NewKernel_d/utils.h>
-#include <CGAL/tuple.h>
-
-
-namespace CGAL {
-template <class Base_> struct Kernel_2_interface : public Base_ {
- typedef Base_ Base;
- typedef Kernel_2_interface<Base> Kernel;
- typedef typename Get_type<Base, RT_tag>::type RT;
- typedef typename Get_type<Base, FT_tag>::type FT;
- typedef typename Get_type<Base, Bool_tag>::type Boolean;
- typedef typename Get_type<Base, Sign_tag>::type Sign;
- typedef typename Get_type<Base, Comparison_result_tag>::type Comparison_result;
- typedef typename Get_type<Base, Orientation_tag>::type Orientation;
- typedef typename Get_type<Base, Oriented_side_tag>::type Oriented_side;
- typedef typename Get_type<Base, Bounded_side_tag>::type Bounded_side;
- typedef typename Get_type<Base, Angle_tag>::type Angle;
- typedef typename Get_type<Base, Point_tag>::type Point_2;
- typedef typename Get_type<Base, Vector_tag>::type Vector_2;
- typedef typename Get_type<Base, Segment_tag>::type Segment_2;
- typedef cpp0x::tuple<Point_2,Point_2,Point_2> Triangle_2; // triangulation insists...
- template <class T,int i> struct Help_2p_i {
- typedef typename Get_functor<Base, T>::type LT;
- typedef typename LT::result_type result_type;
- LT lt;
- Help_2p_i(Kernel const&k):lt(k){}
- result_type operator()(Point_2 const&a, Point_2 const&b) {
- return lt(a,b,i);
- }
- };
- typedef Help_2p_i<Less_point_cartesian_coordinate_tag,0> Less_x_2;
- typedef Help_2p_i<Less_point_cartesian_coordinate_tag,1> Less_y_2;
- typedef Help_2p_i<Compare_point_cartesian_coordinate_tag,0> Compare_x_2;
- typedef Help_2p_i<Compare_point_cartesian_coordinate_tag,1> Compare_y_2;
- struct Compare_distance_2 {
- typedef typename Get_functor<Base, Compare_distance_tag>::type CD;
- typedef typename CD::result_type result_type;
- CD cd;
- Compare_distance_2(Kernel const&k):cd(k){}
- result_type operator()(Point_2 const&a, Point_2 const&b, Point_2 const&c) {
- return cd(a,b,c);
- }
- result_type operator()(Point_2 const&a, Point_2 const&b, Point_2 const&c, Point_2 const&d) {
- return cd(a,b,c,d);
- }
- };
- struct Orientation_2 {
- typedef typename Get_functor<Base, Orientation_of_points_tag>::type O;
- typedef typename O::result_type result_type;
- O o;
- Orientation_2(Kernel const&k):o(k){}
- result_type operator()(Point_2 const&a, Point_2 const&b, Point_2 const&c) {
- //return o(a,b,c);
- Point_2 const* t[3]={&a,&b,&c};
- return o(make_transforming_iterator<Dereference_functor>(t+0),make_transforming_iterator<Dereference_functor>(t+3));
-
- }
- };
- struct Side_of_oriented_circle_2 {
- typedef typename Get_functor<Base, Side_of_oriented_sphere_tag>::type SOS;
- typedef typename SOS::result_type result_type;
- SOS sos;
- Side_of_oriented_circle_2(Kernel const&k):sos(k){}
- result_type operator()(Point_2 const&a, Point_2 const&b, Point_2 const&c, Point_2 const&d) {
- //return sos(a,b,c,d);
- Point_2 const* t[4]={&a,&b,&c,&d};
- return sos(make_transforming_iterator<Dereference_functor>(t+0),make_transforming_iterator<Dereference_functor>(t+4));
- }
- };
- Less_x_2 less_x_2_object()const{ return Less_x_2(*this); }
- Less_y_2 less_y_2_object()const{ return Less_y_2(*this); }
- Compare_x_2 compare_x_2_object()const{ return Compare_x_2(*this); }
- Compare_y_2 compare_y_2_object()const{ return Compare_y_2(*this); }
- Compare_distance_2 compare_distance_2_object()const{ return Compare_distance_2(*this); }
- Orientation_2 orientation_2_object()const{ return Orientation_2(*this); }
- Side_of_oriented_circle_2 side_of_oriented_circle_2_object()const{ return Side_of_oriented_circle_2(*this); }
-};
-}
-
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Kernel_3_interface.h b/include/gudhi_patches/CGAL/NewKernel_d/Kernel_3_interface.h
deleted file mode 100644
index 96076aa8..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Kernel_3_interface.h
+++ /dev/null
@@ -1,102 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_KERNEL_3_INTERFACE_H
-#define CGAL_KD_KERNEL_3_INTERFACE_H
-
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/NewKernel_d/utils.h>
-#include <CGAL/tuple.h>
-
-
-namespace CGAL {
-template <class Base_> struct Kernel_3_interface : public Base_ {
- typedef Base_ Base;
- typedef Kernel_3_interface<Base> Kernel;
- typedef typename Get_type<Base, RT_tag>::type RT;
- typedef typename Get_type<Base, FT_tag>::type FT;
- typedef typename Get_type<Base, Bool_tag>::type Boolean;
- typedef typename Get_type<Base, Sign_tag>::type Sign;
- typedef typename Get_type<Base, Comparison_result_tag>::type Comparison_result;
- typedef typename Get_type<Base, Orientation_tag>::type Orientation;
- typedef typename Get_type<Base, Oriented_side_tag>::type Oriented_side;
- typedef typename Get_type<Base, Bounded_side_tag>::type Bounded_side;
- typedef typename Get_type<Base, Angle_tag>::type Angle;
- typedef typename Get_type<Base, Point_tag>::type Point_3;
- typedef typename Get_type<Base, Vector_tag>::type Vector_3;
- typedef typename Get_type<Base, Segment_tag>::type Segment_3;
- typedef cpp0x::tuple<Point_3,Point_3,Point_3> Triangle_3; // placeholder
- typedef cpp0x::tuple<Point_3,Point_3,Point_3,Point_3> Tetrahedron_3; // placeholder
- struct Compare_xyz_3 {
- typedef typename Get_functor<Base, Compare_lexicographically_tag>::type CL;
- typedef typename CL::result_type result_type;
- CL cl;
- Compare_xyz_3(Kernel const&k):cl(k){}
- result_type operator()(Point_3 const&a, Point_3 const&b) {
- return cl(a,b);
- }
- };
- struct Compare_distance_3 {
- typedef typename Get_functor<Base, Compare_distance_tag>::type CD;
- typedef typename CD::result_type result_type;
- CD cd;
- Compare_distance_3(Kernel const&k):cd(k){}
- result_type operator()(Point_3 const&a, Point_3 const&b, Point_3 const&c) {
- return cd(a,b,c);
- }
- result_type operator()(Point_3 const&a, Point_3 const&b, Point_3 const&c, Point_3 const&d) {
- return cd(a,b,c,d);
- }
- };
- struct Orientation_3 {
- typedef typename Get_functor<Base, Orientation_of_points_tag>::type O;
- typedef typename O::result_type result_type;
- O o;
- Orientation_3(Kernel const&k):o(k){}
- result_type operator()(Point_3 const&a, Point_3 const&b, Point_3 const&c, Point_3 const&d) {
- //return o(a,b,c,d);
- Point_3 const* t[4]={&a,&b,&c,&d};
- return o(make_transforming_iterator<Dereference_functor>(t+0),make_transforming_iterator<Dereference_functor>(t+4));
-
- }
- };
- struct Side_of_oriented_sphere_3 {
- typedef typename Get_functor<Base, Side_of_oriented_sphere_tag>::type SOS;
- typedef typename SOS::result_type result_type;
- SOS sos;
- Side_of_oriented_sphere_3(Kernel const&k):sos(k){}
- result_type operator()(Point_3 const&a, Point_3 const&b, Point_3 const&c, Point_3 const&d, Point_3 const&e) {
- //return sos(a,b,c,d);
- Point_3 const* t[5]={&a,&b,&c,&d,&e};
- return sos(make_transforming_iterator<Dereference_functor>(t+0),make_transforming_iterator<Dereference_functor>(t+5));
- }
- };
-
- // I don't have the Coplanar predicates (yet)
-
-
- Compare_xyz_3 compare_xyz_3_object()const{ return Compare_xyz_3(*this); }
- Compare_distance_3 compare_distance_3_object()const{ return Compare_distance_3(*this); }
- Orientation_3 orientation_3_object()const{ return Orientation_3(*this); }
- Side_of_oriented_sphere_3 side_of_oriented_sphere_3_object()const{ return Side_of_oriented_sphere_3(*this); }
-};
-}
-
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Kernel_d_interface.h b/include/gudhi_patches/CGAL/NewKernel_d/Kernel_d_interface.h
deleted file mode 100644
index dd888005..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Kernel_d_interface.h
+++ /dev/null
@@ -1,298 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_KERNEL_D_INTERFACE_H
-#define CGAL_KD_KERNEL_D_INTERFACE_H
-
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/NewKernel_d/utils.h>
-#include <CGAL/tuple.h>
-
-
-namespace CGAL {
-template <class Base_> struct Kernel_d_interface : public Base_ {
- CGAL_CONSTEXPR Kernel_d_interface(){}
- CGAL_CONSTEXPR Kernel_d_interface(int d):Base_(d){}
-
- typedef Base_ Base;
- typedef Kernel_d_interface<Base> Kernel;
- typedef Base_ R_; // for the macros
- typedef typename Get_type<Base, RT_tag>::type RT;
- typedef typename Get_type<Base, FT_tag>::type FT;
- typedef typename Get_type<Base, Bool_tag>::type Boolean;
- typedef typename Get_type<Base, Sign_tag>::type Sign;
- typedef typename Get_type<Base, Comparison_result_tag>::type Comparison_result;
- typedef typename Get_type<Base, Orientation_tag>::type Orientation;
- typedef typename Get_type<Base, Oriented_side_tag>::type Oriented_side;
- typedef typename Get_type<Base, Bounded_side_tag>::type Bounded_side;
- typedef typename Get_type<Base, Angle_tag>::type Angle;
- typedef typename Get_type<Base, Flat_orientation_tag>::type Flat_orientation_d;
- typedef typename Get_type<Base, Point_tag>::type Point_d;
- typedef typename Get_type<Base, Vector_tag>::type Vector_d;
- typedef typename Get_type<Base, Segment_tag>::type Segment_d;
- typedef typename Get_type<Base, Sphere_tag>::type Sphere_d;
- typedef typename Get_type<Base, Hyperplane_tag>::type Hyperplane_d;
- typedef Vector_d Direction_d;
- typedef typename Get_type<Base, Line_tag>::type Line_d;
- typedef typename Get_type<Base, Ray_tag>::type Ray_d;
- typedef typename Get_type<Base, Iso_box_tag>::type Iso_box_d;
- typedef typename Get_type<Base, Aff_transformation_tag>::type Aff_transformation_d;
- typedef typename Get_type<Base, Weighted_point_tag>::type Weighted_point_d;
- typedef typename Get_functor<Base, Compute_point_cartesian_coordinate_tag>::type Compute_coordinate_d;
- typedef typename Get_functor<Base, Compare_lexicographically_tag>::type Compare_lexicographically_d;
- typedef typename Get_functor<Base, Equal_points_tag>::type Equal_d;
- typedef typename Get_functor<Base, Less_lexicographically_tag>::type Less_lexicographically_d;
- typedef typename Get_functor<Base, Less_or_equal_lexicographically_tag>::type Less_or_equal_lexicographically_d;
- // FIXME: and vectors?
- typedef typename Get_functor<Base, Orientation_of_points_tag>::type Orientation_d;
- typedef typename Get_functor<Base, Less_point_cartesian_coordinate_tag>::type Less_coordinate_d;
- typedef typename Get_functor<Base, Point_dimension_tag>::type Point_dimension_d;
- typedef typename Get_functor<Base, Side_of_oriented_sphere_tag>::type Side_of_oriented_sphere_d;
- typedef typename Get_functor<Base, Power_side_of_power_sphere_tag>::type Power_side_of_power_sphere_d;
- typedef typename Get_functor<Base, Power_center_tag>::type Power_center_d;
- typedef typename Get_functor<Base, Power_distance_tag>::type Power_distance_d;
- typedef typename Get_functor<Base, Contained_in_affine_hull_tag>::type Contained_in_affine_hull_d;
- typedef typename Get_functor<Base, Construct_flat_orientation_tag>::type Construct_flat_orientation_d;
- typedef typename Get_functor<Base, In_flat_orientation_tag>::type In_flat_orientation_d;
- typedef typename Get_functor<Base, In_flat_side_of_oriented_sphere_tag>::type In_flat_side_of_oriented_sphere_d;
- typedef typename Get_functor<Base, In_flat_power_side_of_power_sphere_tag>::type In_flat_power_side_of_power_sphere_d;
- typedef typename Get_functor<Base, Point_to_vector_tag>::type Point_to_vector_d;
- typedef typename Get_functor<Base, Vector_to_point_tag>::type Vector_to_point_d;
- typedef typename Get_functor<Base, Translated_point_tag>::type Translated_point_d;
- typedef typename Get_functor<Base, Scaled_vector_tag>::type Scaled_vector_d;
- typedef typename Get_functor<Base, Difference_of_vectors_tag>::type Difference_of_vectors_d;
- typedef typename Get_functor<Base, Difference_of_points_tag>::type Difference_of_points_d;
- //typedef typename Get_functor<Base, Construct_ttag<Point_tag> >::type Construct_point_d;
- struct Construct_point_d : private Store_kernel<Kernel> {
- typedef Kernel R_; // for the macro
- CGAL_FUNCTOR_INIT_STORE(Construct_point_d)
- typedef typename Get_functor<Base, Construct_ttag<Point_tag> >::type CP;
- typedef Point_d result_type;
- Point_d operator()(Weighted_point_d const&wp)const{
- return typename Get_functor<Base, Point_drop_weight_tag>::type(this->kernel())(wp);
- }
-#ifdef CGAL_CXX11
- Point_d operator()(Weighted_point_d &wp)const{
- return typename Get_functor<Base, Point_drop_weight_tag>::type(this->kernel())(wp);
- }
- Point_d operator()(Weighted_point_d &&wp)const{
- return typename Get_functor<Base, Point_drop_weight_tag>::type(this->kernel())(std::move(wp));
- }
- Point_d operator()(Weighted_point_d const&&wp)const{
- return typename Get_functor<Base, Point_drop_weight_tag>::type(this->kernel())(std::move(wp));
- }
- template<class...T>
-# if __cplusplus >= 201402L
- decltype(auto)
-# else
- Point_d
-# endif
- operator()(T&&...t)const{
- return CP(this->kernel())(std::forward<T>(t)...);
- //return CP(this->kernel())(t...);
- }
-#else
-# define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- Point_d operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t))const{ \
- return CP(this->kernel())(BOOST_PP_ENUM_PARAMS(N,t)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-# undef CGAL_CODE
- Point_d operator()()const{ \
- return CP(this->kernel())(); \
- }
-#endif
- };
- typedef typename Get_functor<Base, Construct_ttag<Vector_tag> >::type Construct_vector_d;
- typedef typename Get_functor<Base, Construct_ttag<Segment_tag> >::type Construct_segment_d;
- typedef typename Get_functor<Base, Construct_ttag<Sphere_tag> >::type Construct_sphere_d;
- typedef typename Get_functor<Base, Construct_ttag<Hyperplane_tag> >::type Construct_hyperplane_d;
- typedef Construct_vector_d Construct_direction_d;
- typedef typename Get_functor<Base, Construct_ttag<Line_tag> >::type Construct_line_d;
- typedef typename Get_functor<Base, Construct_ttag<Ray_tag> >::type Construct_ray_d;
- typedef typename Get_functor<Base, Construct_ttag<Iso_box_tag> >::type Construct_iso_box_d;
- typedef typename Get_functor<Base, Construct_ttag<Aff_transformation_tag> >::type Construct_aff_transformation_d;
- typedef typename Get_functor<Base, Construct_ttag<Weighted_point_tag> >::type Construct_weighted_point_d;
- typedef typename Get_functor<Base, Midpoint_tag>::type Midpoint_d;
- struct Component_accessor_d : private Store_kernel<Kernel> {
- typedef Kernel R_; // for the macro
- CGAL_FUNCTOR_INIT_STORE(Component_accessor_d)
- int dimension(Point_d const&p){
- return this->kernel().point_dimension_d_object()(p);
- }
- FT cartesian(Point_d const&p, int i){
- return this->kernel().compute_coordinate_d_object()(p,i);
- }
- RT homogeneous(Point_d const&p, int i){
- if (i == dimension(p))
- return 1;
- return cartesian(p, i);
- }
- };
- struct Construct_cartesian_const_iterator_d : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_cartesian_const_iterator_d)
- typedef typename Get_functor<Base, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CPI;
- typedef typename Get_functor<Base, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CVI;
- // FIXME: The following sometimes breaks compilation. The typedef below forces instantiation of this, which forces Point_d, which itself (in the wrapper) needs the derived kernel to tell it what the base kernel is, and that's a cycle. The exact circumstances are not clear, g++ and clang++ are ok in both C++03 and C++11, it is only clang in C++11 without CGAL_CXX11 that breaks. For now, rely on result_type.
- //typedef typename CGAL::decay<typename boost::result_of<CPI(Point_d,CGAL::Begin_tag)>::type>::type result_type;
- typedef typename CGAL::decay<typename CPI::result_type>::type result_type;
- // Kernel_d requires a common iterator type for points and vectors
- // TODO: provide this mixed functor in preKernel?
- //CGAL_static_assertion((boost::is_same<typename CGAL::decay<typename boost::result_of<CVI(Vector_d,CGAL::Begin_tag)>::type>::type, result_type>::value));
- CGAL_static_assertion((boost::is_same<typename CGAL::decay<typename CVI::result_type>::type, result_type>::value));
- template <class Tag_>
- result_type operator()(Point_d const&p, Tag_ t)const{
- return CPI(this->kernel())(p,t);
- }
- template <class Tag_>
- result_type operator()(typename First_if_different<Vector_d,Point_d>::Type const&v, Tag_ t)const{
- return CVI(this->kernel())(v,t);
- }
-
- template <class Obj>
- result_type operator()(Obj const&o)const{
- return operator()(o, Begin_tag());
- }
- result_type operator()(Point_d const&p, int)const{
- return operator()(p, End_tag());
- }
- result_type operator()(typename First_if_different<Vector_d,Point_d>::Type const&v, int)const{
- return operator()(v, End_tag());
- }
- };
- struct Compute_squared_radius_d : private Store_kernel<Kernel> {
- typedef Kernel R_; // for the macro
- CGAL_FUNCTOR_INIT_STORE(Compute_squared_radius_d)
- typedef FT result_type;
- template<class S> FT operator()(CGAL_FORWARDABLE(S) s)const{
- return typename Get_functor<Base, Squared_radius_tag>::type(this->kernel())(CGAL_FORWARD(S,s));
- }
- template<class I> FT operator()(I b, I e)const{
- return typename Get_functor<Base, Squared_circumradius_tag>::type(this->kernel())(b,e);
- }
- };
- typedef typename Construct_cartesian_const_iterator_d::result_type Cartesian_const_iterator_d;
- typedef typename Get_functor<Base, Squared_distance_tag>::type Squared_distance_d;
- typedef typename Get_functor<Base, Squared_length_tag>::type Squared_length_d;
- typedef typename Get_functor<Base, Scalar_product_tag>::type Scalar_product_d;
- typedef typename Get_functor<Base, Affine_rank_tag>::type Affine_rank_d;
- typedef typename Get_functor<Base, Affinely_independent_tag>::type Affinely_independent_d;
- typedef typename Get_functor<Base, Contained_in_linear_hull_tag>::type Contained_in_linear_hull_d;
- typedef typename Get_functor<Base, Contained_in_simplex_tag>::type Contained_in_simplex_d;
- typedef typename Get_functor<Base, Has_on_positive_side_tag>::type Has_on_positive_side_d;
- typedef typename Get_functor<Base, Linear_rank_tag>::type Linear_rank_d;
- typedef typename Get_functor<Base, Linearly_independent_tag>::type Linearly_independent_d;
- typedef typename Get_functor<Base, Oriented_side_tag>::type Oriented_side_d;
- typedef typename Get_functor<Base, Side_of_bounded_circumsphere_tag>::type Side_of_bounded_sphere_d;
-
- typedef typename Get_functor<Base, Center_of_sphere_tag>::type Center_of_sphere_d;
- typedef Center_of_sphere_d Construct_center_d; // RangeSearchTraits
- typedef typename Get_functor<Base, Construct_circumcenter_tag>::type Construct_circumcenter_d;
- typedef typename Get_functor<Base, Value_at_tag>::type Value_at_d;
- typedef typename Get_functor<Base, Point_of_sphere_tag>::type Point_of_sphere_d;
- typedef typename Get_functor<Base, Orthogonal_vector_tag>::type Orthogonal_vector_d;
- typedef typename Get_functor<Base, Linear_base_tag>::type Linear_base_d;
- typedef typename Get_functor<Base, Construct_min_vertex_tag>::type Construct_min_vertex_d;
- typedef typename Get_functor<Base, Construct_max_vertex_tag>::type Construct_max_vertex_d;
-
- typedef typename Get_functor<Base, Point_weight_tag>::type Compute_weight_d;
- typedef typename Get_functor<Base, Point_drop_weight_tag>::type Point_drop_weight_d;
-
- //TODO:
- //typedef ??? Intersect_d;
-
-
- Compute_coordinate_d compute_coordinate_d_object()const{ return Compute_coordinate_d(*this); }
- Has_on_positive_side_d has_on_positive_side_d_object()const{ return Has_on_positive_side_d(*this); }
- Compare_lexicographically_d compare_lexicographically_d_object()const{ return Compare_lexicographically_d(*this); }
- Equal_d equal_d_object()const{ return Equal_d(*this); }
- Less_lexicographically_d less_lexicographically_d_object()const{ return Less_lexicographically_d(*this); }
- Less_or_equal_lexicographically_d less_or_equal_lexicographically_d_object()const{ return Less_or_equal_lexicographically_d(*this); }
- Less_coordinate_d less_coordinate_d_object()const{ return Less_coordinate_d(*this); }
- Orientation_d orientation_d_object()const{ return Orientation_d(*this); }
- Oriented_side_d oriented_side_d_object()const{ return Oriented_side_d(*this); }
- Point_dimension_d point_dimension_d_object()const{ return Point_dimension_d(*this); }
- Point_of_sphere_d point_of_sphere_d_object()const{ return Point_of_sphere_d(*this); }
- Side_of_oriented_sphere_d side_of_oriented_sphere_d_object()const{ return Side_of_oriented_sphere_d(*this); }
- Power_side_of_power_sphere_d power_side_of_power_sphere_d_object()const{ return Power_side_of_power_sphere_d(*this); }
- Power_center_d power_center_d_object()const{ return Power_center_d(*this); }
- Power_distance_d power_distance_d_object()const{ return Power_distance_d(*this); }
- Side_of_bounded_sphere_d side_of_bounded_sphere_d_object()const{ return Side_of_bounded_sphere_d(*this); }
- Contained_in_affine_hull_d contained_in_affine_hull_d_object()const{ return Contained_in_affine_hull_d(*this); }
- Contained_in_linear_hull_d contained_in_linear_hull_d_object()const{ return Contained_in_linear_hull_d(*this); }
- Contained_in_simplex_d contained_in_simplex_d_object()const{ return Contained_in_simplex_d(*this); }
- Construct_flat_orientation_d construct_flat_orientation_d_object()const{ return Construct_flat_orientation_d(*this); }
- In_flat_orientation_d in_flat_orientation_d_object()const{ return In_flat_orientation_d(*this); }
- In_flat_side_of_oriented_sphere_d in_flat_side_of_oriented_sphere_d_object()const{ return In_flat_side_of_oriented_sphere_d(*this); }
- In_flat_power_side_of_power_sphere_d in_flat_power_side_of_power_sphere_d_object()const{ return In_flat_power_side_of_power_sphere_d(*this); }
- Point_to_vector_d point_to_vector_d_object()const{ return Point_to_vector_d(*this); }
- Vector_to_point_d vector_to_point_d_object()const{ return Vector_to_point_d(*this); }
- Translated_point_d translated_point_d_object()const{ return Translated_point_d(*this); }
- Scaled_vector_d scaled_vector_d_object()const{ return Scaled_vector_d(*this); }
- Difference_of_vectors_d difference_of_vectors_d_object()const{ return Difference_of_vectors_d(*this); }
- Difference_of_points_d difference_of_points_d_object()const{ return Difference_of_points_d(*this); }
- Affine_rank_d affine_rank_d_object()const{ return Affine_rank_d(*this); }
- Affinely_independent_d affinely_independent_d_object()const{ return Affinely_independent_d(*this); }
- Linear_base_d linear_base_d_object()const{ return Linear_base_d(*this); }
- Linear_rank_d linear_rank_d_object()const{ return Linear_rank_d(*this); }
- Linearly_independent_d linearly_independent_d_object()const{ return Linearly_independent_d(*this); }
- Midpoint_d midpoint_d_object()const{ return Midpoint_d(*this); }
- Value_at_d value_at_d_object()const{ return Value_at_d(*this); }
- /// Intersect_d intersect_d_object()const{ return Intersect_d(*this); }
- Component_accessor_d component_accessor_d_object()const{ return Component_accessor_d(*this); }
- Orthogonal_vector_d orthogonal_vector_d_object()const{ return Orthogonal_vector_d(*this); }
- Construct_cartesian_const_iterator_d construct_cartesian_const_iterator_d_object()const{ return Construct_cartesian_const_iterator_d(*this); }
- Construct_point_d construct_point_d_object()const{ return Construct_point_d(*this); }
- Construct_vector_d construct_vector_d_object()const{ return Construct_vector_d(*this); }
- Construct_segment_d construct_segment_d_object()const{ return Construct_segment_d(*this); }
- Construct_sphere_d construct_sphere_d_object()const{ return Construct_sphere_d(*this); }
- Construct_hyperplane_d construct_hyperplane_d_object()const{ return Construct_hyperplane_d(*this); }
- Compute_squared_radius_d compute_squared_radius_d_object()const{ return Compute_squared_radius_d(*this); }
- Squared_distance_d squared_distance_d_object()const{ return Squared_distance_d(*this); }
- Squared_length_d squared_length_d_object()const{ return Squared_length_d(*this); }
- Scalar_product_d scalar_product_d_object()const{ return Scalar_product_d(*this); }
- Center_of_sphere_d center_of_sphere_d_object()const{ return Center_of_sphere_d(*this); }
- Construct_circumcenter_d construct_circumcenter_d_object()const{ return Construct_circumcenter_d(*this); }
- Construct_direction_d construct_direction_d_object()const{ return Construct_direction_d(*this); }
- Construct_line_d construct_line_d_object()const{ return Construct_line_d(*this); }
- Construct_ray_d construct_ray_d_object()const{ return Construct_ray_d(*this); }
- Construct_iso_box_d construct_iso_box_d_object()const{ return Construct_iso_box_d(*this); }
- Construct_aff_transformation_d construct_aff_transformation_d_object()const{ return Construct_aff_transformation_d(*this); }
- Construct_min_vertex_d construct_min_vertex_d_object()const{ return Construct_min_vertex_d(*this); }
- Construct_max_vertex_d construct_max_vertex_d_object()const{ return Construct_max_vertex_d(*this); }
- Construct_weighted_point_d construct_weighted_point_d_object()const{ return Construct_weighted_point_d(*this); }
-
- Compute_weight_d compute_weight_d_object()const{ return Compute_weight_d(*this); }
- Point_drop_weight_d point_drop_weight_d_object()const{ return Point_drop_weight_d(*this); }
-
- // Dummies for those required functors missing a concept.
- typedef Null_functor Position_on_line_d;
- Position_on_line_d position_on_line_d_object()const{return Null_functor();}
- typedef Null_functor Barycentric_coordinates_d;
- Barycentric_coordinates_d barycentric_coordinates_d_object()const{return Null_functor();}
-
- /* Not provided because they don't make sense here:
- Lift_to_paraboloid_d
- Project_along_d_axis_d
- */
-};
-}
-
-#endif // CGAL_KD_KERNEL_D_INTERFACE_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Kernel_object_converter.h b/include/gudhi_patches/CGAL/NewKernel_d/Kernel_object_converter.h
deleted file mode 100644
index 99918ed2..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Kernel_object_converter.h
+++ /dev/null
@@ -1,134 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_KO_CONVERTER_H
-#define CGAL_KD_KO_CONVERTER_H
-#include <CGAL/NewKernel_d/utils.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Kernel/mpl.h> // First_if_different
-#include <CGAL/Dimension.h>
-namespace CGAL {
-template <class Tag_, class K1, class K2> struct KO_converter;
-//TODO: It would probably be better if this was a Misc Functor in K1.
-// This way K1 could chose how it wants to present its points (sparse
-// iterator?) and derived classes would inherit it.
-
-namespace internal {
-template <class D /*=Dynamic_dimension_tag*/, class K1, class K2>
-struct Point_converter_help {
- typedef typename Get_type<K1, Point_tag>::type argument_type;
- typedef typename Get_type<K2, Point_tag>::type result_type;
- template <class C>
- result_type operator()(K1 const& k1, K2 const& k2, C const& conv, argument_type const& p) const {
- typename Get_functor<K1, Construct_ttag<Point_cartesian_const_iterator_tag> >::type i(k1);
- typename Get_functor<K2, Construct_ttag<Point_tag> >::type cp(k2);
- return cp(conv(i(p,Begin_tag())),conv(i(p,End_tag())));
- }
-};
-#ifdef CGAL_CXX11
-// This doesn't seem so useful, the compiler should be able to handle
-// the iterators just as efficiently.
-template <int d, class K1, class K2>
-struct Point_converter_help<Dimension_tag<d>,K1,K2> {
- typedef typename Get_type<K1, Point_tag>::type argument_type;
- typedef typename Get_type<K2, Point_tag>::type result_type;
- template <class C,int...I>
- result_type help(Indices<I...>, K1 const& k1, K2 const& k2, C const& conv, argument_type const& p) const {
- typename Get_functor<K1, Compute_point_cartesian_coordinate_tag>::type cc(k1);
- typename Get_functor<K2, Construct_ttag<Point_tag> >::type cp(k2);
- return cp(conv(cc(p,I))...);
- }
- template <class C>
- result_type operator()(K1 const& k1, K2 const& k2, C const& conv, argument_type const& p) const {
- return help(typename N_increasing_indices<d>::type(),k1,k2,conv,p);
- }
-};
-#endif
-}
-template <class K1, class K2> struct KO_converter<Point_tag,K1,K2>
-: internal::Point_converter_help<typename K1::Default_ambient_dimension,K1,K2>
-{};
-
-template <class K1, class K2> struct KO_converter<Vector_tag,K1,K2>{
- typedef typename Get_type<K1, Vector_tag>::type K1_Vector;
-
- // Disabling is now done in KernelD_converter
- // // can't use vector without at least a placeholder point because of this
- // typedef typename K1:: Point K1_Point;
- // typedef typename First_if_different<K1_Vector,K1_Point>::Type argument_type;
-
- typedef K1_Vector argument_type;
- typedef typename Get_type<K2, Vector_tag>::type result_type;
- template <class C>
- result_type operator()(K1 const& k1, K2 const& k2, C const& conv, argument_type const& v) const {
- typename Get_functor<K1, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type i(k1);
- typename Get_functor<K2, Construct_ttag<Vector_tag> >::type cp(k2);
- return cp(conv(i(v,Begin_tag())),conv(i(v,End_tag())));
- }
-};
-
-template <class K1, class K2> struct KO_converter<Segment_tag,K1,K2>{
- typedef typename Get_type<K1, Segment_tag>::type argument_type;
- typedef typename Get_type<K2, Segment_tag>::type result_type;
- template <class C>
- result_type operator()(K1 const& k1, K2 const& k2, C const& conv, argument_type const& s) const {
- typename Get_functor<K1, Segment_extremity_tag>::type f(k1);
- typename Get_functor<K2, Construct_ttag<Segment_tag> >::type cs(k2);
- return cs(conv(f(s,0)),conv(f(s,1)));
- }
-};
-
-template <class K1, class K2> struct KO_converter<Hyperplane_tag,K1,K2>{
- typedef typename Get_type<K1, Hyperplane_tag>::type argument_type;
- typedef typename Get_type<K2, Hyperplane_tag>::type result_type;
- template <class C>
- result_type operator()(K1 const& k1, K2 const& k2, C const& conv, argument_type const& h) const {
- typename Get_functor<K1, Orthogonal_vector_tag>::type ov(k1);
- typename Get_functor<K1, Hyperplane_translation_tag>::type ht(k1);
- typename Get_functor<K2, Construct_ttag<Hyperplane_tag> >::type ch(k2);
- return ch(conv(ov(h)),conv(ht(h)));
- }
-};
-
-template <class K1, class K2> struct KO_converter<Sphere_tag,K1,K2>{
- typedef typename Get_type<K1, Sphere_tag>::type argument_type;
- typedef typename Get_type<K2, Sphere_tag>::type result_type;
- template <class C>
- result_type operator()(K1 const& k1, K2 const& k2, C const& conv, argument_type const& s) const {
- typename Get_functor<K1, Center_of_sphere_tag>::type cos(k1);
- typename Get_functor<K1, Squared_radius_tag>::type sr(k1);
- typename Get_functor<K2, Construct_ttag<Sphere_tag> >::type cs(k2);
- return cs(conv(cos(s)),conv(sr(s)));
- }
-};
-
-template <class K1, class K2> struct KO_converter<Weighted_point_tag,K1,K2>{
- typedef typename Get_type<K1, Weighted_point_tag>::type argument_type;
- typedef typename Get_type<K2, Weighted_point_tag>::type result_type;
- template <class C>
- result_type operator()(K1 const& k1, K2 const& k2, C const& conv, argument_type const& s) const {
- typename Get_functor<K1, Point_drop_weight_tag>::type pdw(k1);
- typename Get_functor<K1, Point_weight_tag>::type pw(k1);
- typename Get_functor<K2, Construct_ttag<Weighted_point_tag> >::type cwp(k2);
- return cwp(conv(pdw(s)),conv(pw(s)));
- }
-};
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/LA_eigen/LA.h b/include/gudhi_patches/CGAL/NewKernel_d/LA_eigen/LA.h
deleted file mode 100644
index ddbdc37b..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/LA_eigen/LA.h
+++ /dev/null
@@ -1,175 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_LA_EIGEN_H
-#define CGAL_LA_EIGEN_H
-#include <CGAL/config.h>
-#ifndef CGAL_EIGEN3_ENABLED
-#error Requires Eigen
-#endif
-#include <boost/type_traits/is_arithmetic.hpp>
-#include <boost/utility/enable_if.hpp>
-#include <CGAL/Dimension.h>
-#include <Eigen/Dense>
-#include <CGAL/NewKernel_d/LA_eigen/constructors.h>
-#include <CGAL/iterator_from_indices.h>
-
-namespace CGAL {
-
-//FIXME: where could we use Matrix_base instead of Matrix?
-// Dim_ real dimension
-// Max_dim_ upper bound on the dimension
-template<class NT_,class Dim_,class Max_dim_=Dim_> struct LA_eigen {
- typedef NT_ NT;
- typedef Dim_ Dimension;
- typedef Max_dim_ Max_dimension;
- enum { dimension = Eigen_dimension<Dimension>::value };
- enum { max_dimension = Eigen_dimension<Max_dimension>::value };
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef LA_eigen< NT, D2, D3 > Other;
- };
- template<class,class=void> struct Property : boost::false_type {};
- template<class D> struct Property<Has_vector_plus_minus_tag,D> : boost::true_type {};
- template<class D> struct Property<Has_vector_scalar_ops_tag,D> : boost::true_type {};
- template<class D> struct Property<Has_dot_product_tag,D> : boost::true_type {};
-
- typedef Eigen::Matrix<NT,Eigen_dimension<Dim_>::value,1,Eigen::ColMajor|Eigen::AutoAlign,Eigen_dimension<Max_dim_>::value,1> Vector;
- typedef Eigen::Matrix<NT,Eigen::Dynamic,1> Dynamic_vector;
- typedef Construct_eigen<Vector> Construct_vector;
-
-#if (EIGEN_WORLD_VERSION>=3)
- typedef NT const* Vector_const_iterator;
-#else
- typedef Iterator_from_indices<const type,const NT
-#ifndef CGAL_CXX11
- ,NT
-#endif
- > Vector_const_iterator;
-#endif
-
- template<class Vec_>static Vector_const_iterator vector_begin(Vec_ const&a){
-#if (EIGEN_WORLD_VERSION>=3)
- return &a[0];
-#else
- return Vector_const_iterator(a,0);
-#endif
- }
-
- template<class Vec_>static Vector_const_iterator vector_end(Vec_ const&a){
-#if (EIGEN_WORLD_VERSION>=3)
- // FIXME: Isn't that dangerous if a is an expression and not a concrete vector?
- return &a[0]+a.size();
-#else
- return Vector_const_iterator(a,a.size());
-#endif
- }
-
- typedef Eigen::Matrix<NT,dimension,dimension,Eigen::ColMajor|Eigen::AutoAlign,max_dimension,max_dimension> Square_matrix;
- typedef Eigen::Matrix<NT,dimension,Eigen::Dynamic,Eigen::ColMajor|Eigen::AutoAlign,max_dimension,Eigen::Dynamic> Dynamic_matrix;
- //TODO: don't pass on the values of Max_* for an expensive NT
- // typedef ... Constructor
- // typedef ... Accessor
-#if 0
- private:
- template <class T> class Canonicalize_vector {
- typedef typename Dimension_eigen<T::SizeAtCompileTime>::type S1;
- typedef typename Dimension_eigen<T::MaxSizeAtCompileTime>::type S2;
- public:
- typedef typename Vector<S1,S2>::type type;
- };
- public:
-#endif
-
- template<class Vec_>static int size_of_vector(Vec_ const&v){
- return (int)v.size();
- }
-
- template<class Vec_>static NT dot_product(Vec_ const&a,Vec_ const&b){
- return a.dot(b);
- }
-
- template<class Vec_> static int rows(Vec_ const&v) {
- return (int)v.rows();
- }
- template<class Vec_> static int columns(Vec_ const&v) {
- return (int)v.cols();
- }
-
- template<class Mat_> static NT determinant(Mat_ const&m,bool=false){
- return m.determinant();
- }
-
- template<class Mat_> static typename
- Same_uncertainty_nt<CGAL::Sign, NT>::type
- sign_of_determinant(Mat_ const&m,bool=false)
- {
- return CGAL::sign(m.determinant());
- }
-
- template<class Mat_> static int rank(Mat_ const&m){
- // return m.rank();
- // This one uses sqrt so cannot be used with Gmpq
- // TODO: use different algo for different NT?
- // Eigen::ColPivHouseholderQR<Mat_> decomp(m);
- Eigen::FullPivLU<Mat_> decomp(m);
- // decomp.setThreshold(0);
- return static_cast<int>(decomp.rank());
- }
-
- // m*a==b
- template<class DV, class DM, class V>
- static void solve(DV&a, DM const&m, V const& b){
- //a = m.colPivHouseholderQr().solve(b);
- a = m.fullPivLu().solve(b);
- }
- template<class DV, class DM, class V>
- static bool solve_and_check(DV&a, DM const&m, V const& b){
- //a = m.colPivHouseholderQr().solve(b);
- a = m.fullPivLu().solve(b);
- return b.isApprox(m*a);
- }
-
- static Dynamic_matrix basis(Dynamic_matrix const&m){
- return m.fullPivLu().image(m);
- }
-
- template<class Vec1,class Vec2> static Vector homogeneous_add(Vec1 const&a,Vec2 const&b){
- //TODO: use compile-time size when available
- int d=a.size();
- Vector v(d);
- v << b[d-1]*a.topRows(d-1)+a[d-1]*b.topRows(d-1), a[d-1]*b[d-1];
- return v;
- }
-
- template<class Vec1,class Vec2> static Vector homogeneous_sub(Vec1 const&a,Vec2 const&b){
- int d=a.size();
- Vector v(d);
- v << b[d-1]*a.topRows(d-1)-a[d-1]*b.topRows(d-1), a[d-1]*b[d-1];
- return v;
- }
-
- template<class Vec1,class Vec2> static std::pair<NT,NT> homogeneous_dot_product(Vec1 const&a,Vec2 const&b){
- int d=a.size();
- return make_pair(a.topRows(d-1).dot(b.topRows(d-1)), a[d-1]*b[d-1]);
- }
-
-};
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/LA_eigen/constructors.h b/include/gudhi_patches/CGAL/NewKernel_d/LA_eigen/constructors.h
deleted file mode 100644
index 3636996f..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/LA_eigen/constructors.h
+++ /dev/null
@@ -1,162 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_LA_EIGEN_CONSTRUCTORS_H
-#define CGAL_LA_EIGEN_CONSTRUCTORS_H
-#include <CGAL/config.h>
-
-#if defined(BOOST_MSVC)
-# pragma warning(push)
-# pragma warning(disable:4003) // not enough actual parameters for macro 'BOOST_PP_EXPAND_I'
- // http://lists.boost.org/boost-users/2014/11/83291.php
-#endif
-
-#ifndef CGAL_EIGEN3_ENABLED
-#error Requires Eigen
-#endif
-#include <boost/type_traits/is_arithmetic.hpp>
-#include <boost/utility/enable_if.hpp>
-#include <CGAL/Dimension.h>
-#include <Eigen/Dense>
-#include <CGAL/iterator_from_indices.h>
-#include <CGAL/NewKernel_d/utils.h>
-#include <boost/preprocessor/repetition.hpp>
-#include <boost/preprocessor/repetition/enum.hpp>
-#include <boost/preprocessor/repetition/enum_params.hpp>
-
-namespace CGAL {
- template <class Vector_> struct Construct_eigen {
- typedef Vector_ result_type;
- typedef typename Vector_::Scalar NT;
-
- private:
- static void check_dim(int CGAL_assertion_code(d)){
- CGAL_assertion_code(int m = result_type::MaxSizeAtCompileTime;)
- CGAL_assertion((m == Eigen::Dynamic) || (d <= m));
- }
- public:
-
- struct Dimension {
- // Initialize with NaN if possible?
- result_type operator()(int d) const {
- check_dim(d);
- return result_type(d);
- }
- };
-
- struct Iterator {
- template<typename Iter>
- result_type operator()(int d,Iter const& f,Iter const& e) const {
- check_dim(d);
- CGAL_assertion(d==std::distance(f,e));
- result_type a(d);
- // TODO: check the right way to do this
- std::copy(f,e,&a[0]);
- return a;
- }
- };
-
-#if 0
- struct Iterator_add_one {
- template<typename Iter>
- result_type operator()(int d,Iter const& f,Iter const& e) const {
- check_dim(d);
- CGAL_assertion(d==std::distance(f,e)+1);
- result_type a(d);
- std::copy(f,e,&a[0]);
- a[d-1]=1;
- return a;
- }
- };
-#endif
-
- struct Iterator_and_last {
- template<typename Iter,typename T>
- result_type operator()(int d,Iter const& f,Iter const& e,CGAL_FORWARDABLE(T) t) const {
- check_dim(d);
- CGAL_assertion(d==std::distance(f,e)+1);
- result_type a(d);
- std::copy(f,e,&a[0]);
- a[d-1]=CGAL_FORWARD(T,t);
- return a;
- }
- };
-
-#ifdef CGAL_CXX11
- struct Initializer_list {
- // Fix T==NT?
- template<class T>
- result_type operator()(std::initializer_list<T> l) const {
- return Iterator()(l.size(),l.begin(),l.end());
- }
- };
-#endif
-
- struct Values {
-#ifdef CGAL_CXX11
- // TODO avoid going through Initializer_list which may cause extra copies. Possibly use forward_as_tuple.
- template<class...U>
- result_type operator()(U&&...u) const {
- check_dim(sizeof...(U)); // TODO: use static_assert
- return Initializer_list()({forward_safe<NT,U>(u)...});
- }
-#else
-
-#define CGAL_CODE(Z,N,_) result_type operator()(BOOST_PP_ENUM_PARAMS(N,NT const& t)) const { \
- check_dim(N); \
- result_type a(N); \
- a << BOOST_PP_ENUM_PARAMS(N,t); \
- return a; \
-}
-BOOST_PP_REPEAT_FROM_TO(1, 11, CGAL_CODE, _ )
-#undef CGAL_CODE
-
-#endif
- };
-
- struct Values_divide {
-#ifdef CGAL_CXX11
- template<class H,class...U>
- result_type operator()(H const&h,U&&...u) const {
- check_dim(sizeof...(U)); // TODO: use static_assert
- return Initializer_list()({Rational_traits<NT>().make_rational(std::forward<U>(u),h)...});
- }
-#else
-
-#define CGAL_VAR(Z,N,_) ( Rational_traits<NT>().make_rational( t##N ,h) )
-#define CGAL_CODE(Z,N,_) template <class H> result_type \
- operator()(H const&h, BOOST_PP_ENUM_PARAMS(N,NT const& t)) const { \
- check_dim(N); \
- result_type a(N); \
- a << BOOST_PP_ENUM(N,CGAL_VAR,); \
- return a; \
- }
- BOOST_PP_REPEAT_FROM_TO(1, 11, CGAL_CODE, _ )
-#undef CGAL_CODE
-#undef CGAL_VAR
-
-#endif
- };
- };
-}
-#if defined(BOOST_MSVC)
-# pragma warning(pop)
-#endif
-
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Lazy_cartesian.h b/include/gudhi_patches/CGAL/NewKernel_d/Lazy_cartesian.h
deleted file mode 100644
index 9ecc2b63..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Lazy_cartesian.h
+++ /dev/null
@@ -1,188 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_LAZY_CARTESIAN_H
-#define CGAL_KERNEL_D_LAZY_CARTESIAN_H
-
-#include <CGAL/basic.h>
-#include <CGAL/algorithm.h>
-#include <CGAL/Lazy.h>
-#include <CGAL/Default.h>
-#include <CGAL/NewKernel_d/Filtered_predicate2.h>
-#include <CGAL/iterator_from_indices.h>
-#include <CGAL/NewKernel_d/Define_kernel_types.h>
-
-namespace CGAL {
-
-template<class K,class T>
-struct Nth_iterator_element : private Store_kernel<K> {
- Nth_iterator_element(){}
- Nth_iterator_element(K const&k):Store_kernel<K>(k){}
- typedef typename Get_type<K, typename iterator_tag_traits<T>::value_tag>::type result_type;
- template<class U> result_type operator()(CGAL_FORWARDABLE(U) u, int i) const {
- typename Get_functor<K, Construct_ttag<T> >::type ci(this->kernel());
- return *cpp0x::next(ci(CGAL_FORWARD(U,u),Begin_tag()),i);
- }
-};
- //typedef typename Functor<typename iterator_tag_traits<T>::nth_element>::type nth_elem;
-template<class K, class T, bool = iterator_tag_traits<T>::has_nth_element>
-struct Select_nth_element_functor {
- typedef Nth_iterator_element<K, T> type;
-};
-template<class K, class T>
-struct Select_nth_element_functor <K, T, true> :
- Get_functor<K, typename iterator_tag_traits<T>::nth_element> {};
-
-namespace internal {
- template<class A,class B,class C,bool/*is_NT=false*/>
- struct Lazy_construction_maybe_nt {
- typedef Lazy_construction<A,B,C> type;
- };
- template<class A,class B,class C>
- struct Lazy_construction_maybe_nt<A,B,C,true> {
- typedef Lazy_construction_nt<A,B,C> type;
- };
-}
-
-template <class EK_, class AK_, class E2A_, class Kernel_>
-struct Lazy_cartesian_types
-{
- typedef typename typeset_intersection<
- typename AK_::Object_list,
- typename EK_::Object_list
- >::type Object_list;
-
- typedef typename typeset_intersection<
- typename AK_::Iterator_list,
- typename EK_::Iterator_list
- >::type Iterator_list;
-
- template <class T,class=typename Get_type_category<Kernel_,T>::type> struct Type {};
- template <class T> struct Type<T,Object_tag> {
- typedef Lazy<
- typename Get_type<AK_,T>::type,
- typename Get_type<EK_,T>::type,
- typename Get_type<EK_, FT_tag>::type,
- E2A_> type;
- };
- template <class T> struct Type<T,Number_tag> {
- typedef CGAL::Lazy_exact_nt<typename Get_type<EK_,T>::type> type;
- };
-
- template <class T> struct Iterator {
- typedef typename iterator_tag_traits<T>::value_tag Vt;
- typedef typename Type<Vt>::type V;
- typedef typename Select_nth_element_functor<AK_,T>::type AF;
- typedef typename Select_nth_element_functor<EK_,T>::type EF;
-
- typedef typename internal::Lazy_construction_maybe_nt<
- Kernel_, AF, EF, is_NT_tag<Vt>::value
- >::type nth_elem;
-
- typedef Iterator_from_indices<
- const typename Type<typename iterator_tag_traits<T>::container>::type,
- const V, V, nth_elem
- > type;
- };
-};
-
-template <class EK_, class AK_, class E2A_/*, class Kernel_=Default*/>
-struct Lazy_cartesian : Dimension_base<typename EK_::Default_ambient_dimension>,
- Lazy_cartesian_types<EK_,AK_,E2A_,Lazy_cartesian<EK_,AK_,E2A_> >
-{
- //CGAL_CONSTEXPR Lazy_cartesian(){}
- //CGAL_CONSTEXPR Lazy_cartesian(int d):Base_(d){}
-
- //TODO: Do we want to store an AK and an EK? Or just references?
- //FIXME: references would be better I guess.
- //TODO: In any case, make sure that we don't end up storing this kernel for
- //nothing (it is not empty but references empty kernels or something)
- AK_ ak; EK_ ek;
- AK_ const& approximate_kernel()const{return ak;}
- EK_ const& exact_kernel()const{return ek;}
-
- typedef Lazy_cartesian Self;
- typedef Lazy_cartesian_types<EK_,AK_,E2A_,Self> Base;
- //typedef typename Default::Get<Kernel_,Self>::type Kernel;
- typedef Self Kernel;
- typedef AK_ Approximate_kernel;
- typedef EK_ Exact_kernel;
- typedef E2A_ E2A;
- typedef Approx_converter<Kernel, Approximate_kernel> C2A;
- typedef Exact_converter<Kernel, Exact_kernel> C2E;
-
- typedef typename Exact_kernel::Rep_tag Rep_tag;
- typedef typename Exact_kernel::Kernel_tag Kernel_tag;
- typedef typename Exact_kernel::Default_ambient_dimension Default_ambient_dimension;
- typedef typename Exact_kernel::Max_ambient_dimension Max_ambient_dimension;
- //typedef typename Exact_kernel::Flat_orientation Flat_orientation;
- // Check that Approximate_kernel agrees with all that...
-
- template<class T,class D=void,class=typename Get_functor_category<Lazy_cartesian,T,D>::type> struct Functor {
- typedef Null_functor type;
- };
- //FIXME: what do we do with D here?
- template<class T,class D> struct Functor<T,D,Predicate_tag> {
- typedef typename Get_functor<Approximate_kernel, T>::type FA;
- typedef typename Get_functor<Exact_kernel, T>::type FE;
- typedef Filtered_predicate2<FE,FA,C2E,C2A> type;
- };
- template<class T,class D> struct Functor<T,D,Compute_tag> {
- typedef typename Get_functor<Approximate_kernel, T>::type FA;
- typedef typename Get_functor<Exact_kernel, T>::type FE;
- typedef Lazy_construction_nt<Kernel,FA,FE> type;
- };
- template<class T,class D> struct Functor<T,D,Construct_tag> {
- typedef typename Get_functor<Approximate_kernel, T>::type FA;
- typedef typename Get_functor<Exact_kernel, T>::type FE;
- typedef Lazy_construction<Kernel,FA,FE> type;
- };
-
- //typedef typename Iterator<Point_cartesian_const_iterator_tag>::type Point_cartesian_const_iterator;
- //typedef typename Iterator<Vector_cartesian_const_iterator_tag>::type Vector_cartesian_const_iterator;
-
- template<class U>
- struct Construct_iter : private Store_kernel<Kernel> {
- Construct_iter(){}
- Construct_iter(Kernel const&k):Store_kernel<Kernel>(k){}
- //FIXME: pass the kernel to the functor in the iterator
- typedef U result_type;
- template<class T>
- result_type operator()(T const& t,Begin_tag)const{
- return result_type(t,0,this->kernel());
- }
- template<class T>
- result_type operator()(T const& t,End_tag)const{
- return result_type(t,Self().dimension(),this->kernel());
- }
- };
- template<class T,class D> struct Functor<T,D,Construct_iterator_tag> {
- typedef Construct_iter<typename Base::template Iterator<typename map_result_tag<T>::type>::type> type;
- };
-
-
- //TODO: what about other functors of the Misc category?
- // for Point_dimension, we should apply it to the approximate point
- // for printing, we should??? just not do printing this way?
-};
-
-
-} //namespace CGAL
-
-#endif // CGAL_KERNEL_D_LAZY_CARTESIAN_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Types/Aff_transformation.h b/include/gudhi_patches/CGAL/NewKernel_d/Types/Aff_transformation.h
deleted file mode 100644
index 6d9f070f..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Types/Aff_transformation.h
+++ /dev/null
@@ -1,59 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_TYPE_AFF_TRANSFORMATION_H
-#define CGAL_KD_TYPE_AFF_TRANSFORMATION_H
-#include <CGAL/config.h>
-#include <CGAL/NewKernel_d/store_kernel.h>
-#include <boost/preprocessor/repetition.hpp>
-
-// Dummy, that's all the Kernel_d concept requires, so a useful class will wait.
-
-namespace CGAL {
-template<class R_>
-struct Aff_transformation {
- typedef R_ R;
-};
-namespace CartesianDKernelFunctors {
-template<class R_> struct Construct_aff_transformation {
- CGAL_FUNCTOR_INIT_IGNORE(Construct_aff_transformation)
- typedef R_ R;
- typedef typename Get_type<R, Aff_transformation_tag>::type result_type;
-#ifdef CGAL_CXX11
- template<class...T>
- result_type operator()(T&&...)const{return result_type();}
-#else
- result_type operator()()const{
- return result_type();
- }
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class U)> \
- result_type operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,U,const& BOOST_PP_INTERCEPT))const{ \
- return result_type(); \
- }
- BOOST_PP_REPEAT_FROM_TO(1, 9, CGAL_CODE, _ )
-#undef CGAL_CODE
-
-#endif
-};
-}
-CGAL_KD_DEFAULT_TYPE(Aff_transformation_tag,(CGAL::Aff_transformation<K>),(),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_ttag<Aff_transformation_tag>,(CartesianDKernelFunctors::Construct_aff_transformation<K>),(Aff_transformation_tag),());
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Types/Hyperplane.h b/include/gudhi_patches/CGAL/NewKernel_d/Types/Hyperplane.h
deleted file mode 100644
index 14e35b01..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Types/Hyperplane.h
+++ /dev/null
@@ -1,159 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_TYPE_HYPERPLANE_H
-#define CGAL_KD_TYPE_HYPERPLANE_H
-#include <CGAL/enum.h>
-#include <CGAL/number_utils.h>
-#include <CGAL/NewKernel_d/store_kernel.h>
-#include <boost/iterator/transform_iterator.hpp>
-#include <boost/iterator/counting_iterator.hpp>
-namespace CGAL {
-template <class R_> class Hyperplane {
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename Get_type<R_, Vector_tag>::type Vector_;
- Vector_ v_;
- FT_ s_;
-
- public:
- Hyperplane(Vector_ const&v, FT_ const&s): v_(v), s_(s) {}
- // TODO: Add a piecewise constructor?
-
- Vector_ const& orthogonal_vector()const{return v_;}
- FT_ translation()const{return s_;}
-};
-namespace CartesianDKernelFunctors {
-template <class R_> struct Construct_hyperplane : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_hyperplane)
- typedef typename Get_type<R_, Hyperplane_tag>::type result_type;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, Vector_tag>::type Vector;
- typedef typename Get_type<R_, FT_tag>::type FT;
- private:
- struct One {
- typedef int result_type;
- template<class T>int const& operator()(T const&)const{
- static const int one = 1;
- return one;
- }
- };
- public:
-
- result_type operator()(Vector const&a, FT const&b)const{
- return result_type(a,b);
- }
- // Not really needed
- result_type operator()()const{
- typename Get_functor<R_, Construct_ttag<Vector_tag> >::type cv(this->kernel());
- return result_type(cv(),0);
- }
-
- template <class Iter>
- result_type through(Iter f, Iter e)const{
- typedef typename R_::LA LA;
- typedef typename R_::Default_ambient_dimension D1;
- typedef typename R_::Max_ambient_dimension D2;
- typedef typename Increment_dimension<D1>::type D1i;
- typedef typename Increment_dimension<D2>::type D2i;
-
- typedef Eigen::Matrix<FT, Eigen_dimension<D1>::value, Eigen_dimension<D1i>::value,
- Eigen::ColMajor|Eigen::AutoAlign, Eigen_dimension<D2>::value, Eigen_dimension<D2i>::value> Matrix;
- typedef Eigen::Matrix<FT, Eigen_dimension<D1i>::value, 1,
- Eigen::ColMajor|Eigen::AutoAlign, Eigen_dimension<D2i>::value, 1> Vec;
- typename Get_functor<R_, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R_, Construct_ttag<Vector_tag> >::type cv(this->kernel());
- typename Get_functor<R_, Point_dimension_tag>::type pd(this->kernel());
-
- Point const& p0=*f;
- int d = pd(p0);
- Matrix m(d,d+1);
- for(int j=0;j<d;++j)
- m(0,j)=c(p0,j);
- // Write the point coordinates in lines.
- int i;
- for (i=1; ++f!=e; ++i) {
- Point const& p=*f;
- for(int j=0;j<d;++j)
- m(i,j)=c(p,j);
- }
- CGAL_assertion (i == d);
- for(i=0;i<d;++i)
- m(i,d)=-1;
- Eigen::FullPivLU<Matrix> lu(m);
- Vec res = lu.kernel().col(0);
- return this->operator()(cv(d,LA::vector_begin(res),LA::vector_end(res)-1),res(d));
- }
- template <class Iter>
- result_type operator()(Iter f, Iter e, Point const&p, CGAL::Oriented_side s=ON_ORIENTED_BOUNDARY)const{
- result_type ret = through(f, e);
- // I don't really like using ON_ORIENTED_BOUNDARY to mean that we don't care, we might as well not pass 'p' at all.
- if (s == ON_ORIENTED_BOUNDARY)
- return ret;
- typename Get_functor<R_, Oriented_side_tag>::type os(this->kernel());
- CGAL::Oriented_side o = os(ret, p);
- if (o == ON_ORIENTED_BOUNDARY || o == s)
- return ret;
- typename Get_functor<R_, Opposite_vector_tag>::type ov(this->kernel());
- typename Get_functor<R_, Construct_ttag<Vector_tag> >::type cv(this->kernel());
- return this->operator()(ov(ret.orthogonal_vector()), -ret.translation());
- }
-};
-template <class R_> struct Orthogonal_vector {
- CGAL_FUNCTOR_INIT_IGNORE(Orthogonal_vector)
- typedef typename Get_type<R_, Hyperplane_tag>::type Hyperplane;
- typedef typename Get_type<R_, Vector_tag>::type const& result_type;
- result_type operator()(Hyperplane const&s)const{
- return s.orthogonal_vector();
- }
-};
-template <class R_> struct Hyperplane_translation {
- CGAL_FUNCTOR_INIT_IGNORE(Hyperplane_translation)
- typedef typename Get_type<R_, Hyperplane_tag>::type Hyperplane;
- typedef typename Get_type<R_, FT_tag>::type result_type;
- // TODO: Is_exact?
- result_type operator()(Hyperplane const&s)const{
- return s.translation();
- }
-};
-template <class R_> struct Value_at : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Value_at)
- typedef typename Get_type<R_, Hyperplane_tag>::type Hyperplane;
- typedef typename Get_type<R_, Vector_tag>::type Vector;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, FT_tag>::type FT;
- typedef FT result_type;
- typedef typename Get_functor<R_, Scalar_product_tag>::type Dot;
- typedef typename Get_functor<R_, Point_to_vector_tag>::type P2V;
- result_type operator()(Hyperplane const&h, Point const&p)const{
- Dot dot(this->kernel());
- P2V p2v(this->kernel());
- return dot(h.orthogonal_vector(),p2v(p));
- // Use Orthogonal_vector to make it generic?
- // Copy the code from Scalar_product to avoid p2v?
- }
-};
-}
-//TODO: Add a condition that the hyperplane type is the one from this file.
-CGAL_KD_DEFAULT_TYPE(Hyperplane_tag,(CGAL::Hyperplane<K>),(Vector_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_ttag<Hyperplane_tag>,(CartesianDKernelFunctors::Construct_hyperplane<K>),(Vector_tag,Hyperplane_tag),(Opposite_vector_tag,Oriented_side_tag));
-CGAL_KD_DEFAULT_FUNCTOR(Orthogonal_vector_tag,(CartesianDKernelFunctors::Orthogonal_vector<K>),(Vector_tag,Hyperplane_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Hyperplane_translation_tag,(CartesianDKernelFunctors::Hyperplane_translation<K>),(Hyperplane_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Value_at_tag,(CartesianDKernelFunctors::Value_at<K>),(Point_tag,Vector_tag,Hyperplane_tag),(Scalar_product_tag,Point_to_vector_tag));
-} // namespace CGAL
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Types/Iso_box.h b/include/gudhi_patches/CGAL/NewKernel_d/Types/Iso_box.h
deleted file mode 100644
index d053f351..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Types/Iso_box.h
+++ /dev/null
@@ -1,88 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNELD_TYPES_ISO_BOX_H
-#define CGAL_KERNELD_TYPES_ISO_BOX_H
-#include <utility>
-#include <CGAL/basic.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Kernel/mpl.h>
-#include <CGAL/transforming_pair_iterator.h>
-namespace CGAL {
-template <class R_> class Iso_box {
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- typedef std::pair<Point_,Point_> Data_;
- Data_ data;
- public:
- Iso_box(){}
- Iso_box(Point_ const&a, Point_ const&b): data(a,b) {}
- Point_ min BOOST_PREVENT_MACRO_SUBSTITUTION ()const{
- return data.first;
- }
- Point_ max BOOST_PREVENT_MACRO_SUBSTITUTION ()const{
- return data.second;
- }
-};
-namespace CartesianDKernelFunctors {
- template <class R_> struct Construct_iso_box : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_iso_box)
- typedef typename Get_type<R_, Iso_box_tag>::type result_type;
- typedef typename Get_type<R_, RT_tag>::type RT;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_functor<R_, Construct_ttag<Point_tag> >::type Cp_;
- typedef typename Get_functor<R_, Construct_ttag<Point_cartesian_const_iterator_tag> >::type Ci_;
- result_type operator()(Point const&a, Point const&b)const{
- Cp_ cp(this->kernel());
- Ci_ ci(this->kernel());
- return result_type(cp(
- make_transforming_pair_iterator(ci(a,Begin_tag()), ci(b,Begin_tag()), Min<RT>()),
- make_transforming_pair_iterator(ci(a,End_tag()), ci(b,End_tag()), Min<RT>())),
- cp(
- make_transforming_pair_iterator(ci(a,Begin_tag()), ci(b,Begin_tag()), Max<RT>()),
- make_transforming_pair_iterator(ci(a,End_tag()), ci(b,End_tag()), Max<RT>())));
- }
- };
-
- template <class R_> struct Construct_min_vertex {
- CGAL_FUNCTOR_INIT_IGNORE(Construct_min_vertex)
- typedef typename Get_type<R_, Iso_box_tag>::type argument_type;
- //TODO: make result_type a reference
- typedef typename Get_type<R_, Point_tag>::type result_type;
- result_type operator()(argument_type const&b)const{
- return b.min BOOST_PREVENT_MACRO_SUBSTITUTION ();
- }
- };
- template <class R_> struct Construct_max_vertex {
- CGAL_FUNCTOR_INIT_IGNORE(Construct_max_vertex)
- typedef typename Get_type<R_, Iso_box_tag>::type argument_type;
- typedef typename Get_type<R_, Point_tag>::type result_type;
- result_type operator()(argument_type const&b)const{
- return b.max BOOST_PREVENT_MACRO_SUBSTITUTION ();
- }
- };
-}
-//TODO (other types as well) only enable these functors if the Iso_box type is the one defined in this file...
-CGAL_KD_DEFAULT_TYPE(Iso_box_tag,(CGAL::Iso_box<K>),(Point_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_ttag<Iso_box_tag>,(CartesianDKernelFunctors::Construct_iso_box<K>),(Iso_box_tag,Point_tag),(Construct_ttag<Point_cartesian_const_iterator_tag>,Construct_ttag<Point_tag>));
-CGAL_KD_DEFAULT_FUNCTOR(Construct_min_vertex_tag,(CartesianDKernelFunctors::Construct_min_vertex<K>),(Iso_box_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_max_vertex_tag,(CartesianDKernelFunctors::Construct_max_vertex<K>),(Iso_box_tag),());
-} // namespace CGAL
-
-#endif // CGAL_KERNELD_TYPES_ISO_BOX_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Types/Line.h b/include/gudhi_patches/CGAL/NewKernel_d/Types/Line.h
deleted file mode 100644
index 6a09571c..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Types/Line.h
+++ /dev/null
@@ -1,66 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNELD_TYPES_LINE_H
-#define CGAL_KERNELD_TYPES_LINE_H
-#include <utility>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Kernel/mpl.h>
-namespace CGAL {
-template <class R_> class Line {
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- typedef std::pair<Point_,Point_> Data_;
- Data_ data;
- public:
- Line(){}
- Line(Point_ const&a, Point_ const&b): data(a,b) {}
- Point_ point(int i)const{
- if(i==0) return data.first;
- if(i==1) return data.second;
- throw "not implemented";
- }
- Line opposite()const{
- return Line(data.second,data.first);
- }
-};
-namespace CartesianDKernelFunctors {
- template <class R_> struct Construct_line : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_line)
- typedef typename Get_type<R_, Line_tag>::type result_type;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, Vector_tag>::type Vector;
- typedef typename Get_functor<R_, Translated_point_tag>::type Tp_;
- //typedef typename Get_functor<R_, Difference_of_points_tag>::type Dp_;
- //typedef typename Get_functor<R_, Scaled_vector_tag>::type Sv_;
- result_type operator()(Point const&a, Point const&b)const{
- return result_type(a,b);
- }
- result_type operator()(Point const&a, typename First_if_different<Vector,Point>::Type const&b)const{
- Tp_ tp(this->kernel());
- return result_type(a,tp(a,b));
- }
- };
-}
-CGAL_KD_DEFAULT_TYPE(Line_tag,(CGAL::Line<K>),(Point_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_ttag<Line_tag>,(CartesianDKernelFunctors::Construct_line<K>),(Line_tag,Point_tag,Vector_tag),(Translated_point_tag));
-
-} // namespace CGAL
-
-#endif // CGAL_KERNELD_TYPES_LINE_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Types/Ray.h b/include/gudhi_patches/CGAL/NewKernel_d/Types/Ray.h
deleted file mode 100644
index be845e76..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Types/Ray.h
+++ /dev/null
@@ -1,66 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNELD_TYPES_RAY_H
-#define CGAL_KERNELD_TYPES_RAY_H
-#include <utility>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Kernel/mpl.h>
-namespace CGAL {
-template <class R_> class Ray {
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- typedef typename Get_type<R_, Vector_tag>::type Vector_;
- typedef std::pair<Point_,Vector_> Data_;
- Data_ data;
- public:
- Ray(){}
- Ray(Point_ const&a, Vector_ const&b): data(a,b) {}
- Point_ source()const{
- return data.first;
- }
- // FIXME: return a R_::Direction?
- Vector_ direction()const{
- return data.second;
- }
-};
-namespace CartesianDKernelFunctors {
- template <class R_> struct Construct_ray : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_ray)
- typedef typename Get_type<R_, Ray_tag>::type result_type;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, Vector_tag>::type Vector;
- typedef typename Get_functor<R_, Difference_of_points_tag>::type Dp_;
- //typedef typename Get_functor<R_, Translated_point_tag>::type Tp_;
- //typedef typename Get_functor<R_, Scaled_vector_tag>::type Sv_;
- result_type operator()(Point const&a, Vector const&b)const{
- return result_type(a,b);
- }
- result_type operator()(Point const&a, typename First_if_different<Point,Vector>::Type const&b)const{
- Dp_ dp(this->kernel());
- return result_type(a,dp(b,a));
- }
- };
-}
-CGAL_KD_DEFAULT_TYPE(Ray_tag,(CGAL::Ray<K>),(Point_tag,Vector_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_ttag<Ray_tag>,(CartesianDKernelFunctors::Construct_ray<K>),(Point_tag,Ray_tag,Vector_tag),(Difference_of_points_tag));
-
-} // namespace CGAL
-
-#endif // CGAL_KERNELD_TYPES_RAY_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Types/Segment.h b/include/gudhi_patches/CGAL/NewKernel_d/Types/Segment.h
deleted file mode 100644
index 38361c2b..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Types/Segment.h
+++ /dev/null
@@ -1,121 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNELD_SEGMENTD_H
-#define CGAL_KERNELD_SEGMENTD_H
-#include <CGAL/config.h>
-#include <utility>
-#include <CGAL/NewKernel_d/functor_tags.h>
-namespace CGAL {
-template <class R_> class Segment {
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- //typedef typename R_::Vector Vector_;
- //typedef typename Get_functor<R_, Construct_ttag<Vector_tag> >::type Cv_;
-// typedef typename R_::Squared_distance Csd_;
- typedef std::pair<Point_,Point_> Data_;
- Data_ data;
- public:
- //typedef Segmentd<R_> Segment;
-#ifdef CGAL_CXX11
- //FIXME: don't forward directly, piecewise_constuct should call the point construction functor (I guess? or is it unnecessary?)
- template<class...U,class=typename std::enable_if<!std::is_same<std::tuple<typename std::decay<U>::type...>,std::tuple<Segment>>::value>::type>
- Segment(U&&...u):data(std::forward<U>(u)...){}
-#else
- Segment(){}
- Segment(Point_ const&a, Point_ const&b): data(a,b) {}
- //template<class A,class T1,class T2>
- //Segment(A const&,T1 const&t1,T2 const&t2)
-#endif
- Point_ source()const{return data.first;}
- Point_ target()const{return data.second;}
- Point_ operator[](int i)const{
- if((i%2)==0)
- return source();
- else
- return target();
- }
- Segment opposite()const{
- return Segment(target(),source());
- }
- //Vector_ vector()const{
- // return Cv_()(data.first,data.second);
- //}
-// FT_ squared_length()const{
-// return Csd_()(data.first,data.second);
-// }
-};
-
-namespace CartesianDKernelFunctors {
-
-template<class R_> struct Construct_segment : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_segment)
- typedef R_ R;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, Segment_tag>::type Segment;
- typedef typename Get_functor<R_, Construct_ttag<Point_tag> >::type CP;
- typedef Segment result_type;
- result_type operator()(Point const&a, Point const&b)const{
- return result_type(a,b);
- }
- // Not really needed, especially since it forces us to store the kernel
- result_type operator()()const{
- Point p = typename Get_functor<R_, Construct_ttag<Point_tag> >::type (this->kernel()) ();
- return result_type (p, p);
- }
- // T should only be std::piecewise_construct_t, but we shouldn't fail if it doesn't exist.
- template<class T,class U,class V>
- result_type operator()(CGAL_FORWARDABLE(T),CGAL_FORWARDABLE(U) u,CGAL_FORWARDABLE(V) v)const{
- CP cp(this->kernel());
- result_type r = {{
- call_on_tuple_elements<Point>(cp, CGAL_FORWARD(U,u)),
- call_on_tuple_elements<Point>(cp, CGAL_FORWARD(V,v)) }};
- return r;
- }
-};
-
-// This should be part of Construct_point, according to Kernel_23 conventions
-template<class R_> struct Segment_extremity {
- CGAL_FUNCTOR_INIT_IGNORE(Segment_extremity)
- typedef R_ R;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, Segment_tag>::type Segment;
- typedef Point result_type;
- result_type operator()(Segment const&s, int i)const{
- if(i==0) return s.source();
- CGAL_assertion(i==1);
- return s.target();
- }
-#ifdef CGAL_CXX11
- result_type operator()(Segment &&s, int i)const{
- if(i==0) return std::move(s.source());
- CGAL_assertion(i==1);
- return std::move(s.target());
- }
-#endif
-};
-} // CartesianDKernelFunctors
-
-CGAL_KD_DEFAULT_TYPE(Segment_tag,(CGAL::Segment<K>),(Point_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_ttag<Segment_tag>,(CartesianDKernelFunctors::Construct_segment<K>),(Segment_tag,Point_tag),(Construct_ttag<Point_tag>));
-CGAL_KD_DEFAULT_FUNCTOR(Segment_extremity_tag,(CartesianDKernelFunctors::Segment_extremity<K>),(Segment_tag,Point_tag),());
-
-} // namespace CGAL
-
-#endif // CGAL_KERNELD_SEGMENTD_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Types/Sphere.h b/include/gudhi_patches/CGAL/NewKernel_d/Types/Sphere.h
deleted file mode 100644
index 114410b4..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Types/Sphere.h
+++ /dev/null
@@ -1,132 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_TYPE_SPHERE_H
-#define CGAL_KD_TYPE_SPHERE_H
-#include <CGAL/NewKernel_d/store_kernel.h>
-#include <boost/iterator/counting_iterator.hpp>
-namespace CGAL {
-template <class R_> class Sphere {
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- Point_ c_;
- FT_ r2_;
-
- public:
- Sphere(Point_ const&p, FT_ const&r2): c_(p), r2_(r2) {}
- // TODO: Add a piecewise constructor?
-
- Point_ const& center()const{return c_;}
- FT_ const& squared_radius()const{return r2_;}
-};
-
-namespace CartesianDKernelFunctors {
-template <class R_> struct Construct_sphere : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_sphere)
- typedef typename Get_type<R_, Sphere_tag>::type result_type;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, FT_tag>::type FT;
- result_type operator()(Point const&a, FT const&b)const{
- return result_type(a,b);
- }
- // Not really needed
- result_type operator()()const{
- typename Get_functor<R_, Construct_ttag<Point_tag> >::type cp(this->kernel());
- return result_type(cp(),0);
- }
- template <class Iter>
- result_type operator()(Iter f, Iter e)const{
- typename Get_functor<R_, Construct_circumcenter_tag>::type cc(this->kernel());
- typename Get_functor<R_, Squared_distance_tag>::type sd(this->kernel());
-
- // It should be possible to avoid copying the center by moving this code to a constructor.
- Point center = cc(f, e);
- FT const& r2 = sd(center, *f);
- return this->operator()(CGAL_MOVE(center), r2);
- }
-};
-
-template <class R_> struct Center_of_sphere : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Center_of_sphere)
- typedef typename Get_type<R_, Sphere_tag>::type Sphere;
- // No reference because of the second overload
- typedef typename Get_type<R_, Point_tag>::type result_type;
-
- result_type const& operator()(Sphere const&s)const{
- return s.center();
- }
-
- template<class Iter>
- result_type operator()(Iter b, Iter e)const{
- typename Get_functor<R_, Construct_ttag<Sphere_tag> >::type cs(this->kernel());
- return operator()(cs(b,e)); // computes the radius needlessly
- }
-};
-
-template <class R_> struct Squared_radius {
- CGAL_FUNCTOR_INIT_IGNORE(Squared_radius)
- typedef typename Get_type<R_, Sphere_tag>::type Sphere;
- typedef typename Get_type<R_, FT_tag>::type const& result_type;
- // TODO: Is_exact?
- result_type operator()(Sphere const&s)const{
- return s.squared_radius();
- }
-};
-
-// FIXME: Move it to the generic functors, using the two above and conditional to the existence of sqrt(FT)
-template<class R_> struct Point_of_sphere : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Point_of_sphere)
- typedef R_ R;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Sphere_tag>::type Sphere;
- typedef typename Get_functor<R, Construct_ttag<Point_tag> >::type CP;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CI;
- typedef typename Get_functor<R, Point_dimension_tag>::type PD;
- typedef Point result_type;
- typedef Sphere first_argument_type;
- typedef int second_argument_type;
- struct Trans : std::binary_function<FT,int,FT> {
- FT const& r_; int idx; bool sgn;
- Trans (int n, FT const& r, bool b) : r_(r), idx(n), sgn(b) {}
- FT operator()(FT const&x, int i)const{
- return (i == idx) ? sgn ? x + r_ : x - r_ : x;
- }
- };
- result_type operator()(Sphere const&s, int i)const{
- CI ci(this->kernel());
- PD pd(this->kernel());
- typedef boost::counting_iterator<int,std::random_access_iterator_tag> Count;
- Point const&c = s.center();
- int d=pd(c);
- bool last = (i == d);
- FT r = sqrt(s.squared_radius());
- Trans t(last ? 0 : i, r, !last);
- return CP(this->kernel())(make_transforming_pair_iterator(ci(c,Begin_tag()),Count(0),t),make_transforming_pair_iterator(ci(c,End_tag()),Count(d),t));
- }
-};
-}
-CGAL_KD_DEFAULT_TYPE(Sphere_tag,(CGAL::Sphere<K>),(Point_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_ttag<Sphere_tag>,(CartesianDKernelFunctors::Construct_sphere<K>),(Sphere_tag,Point_tag),(Construct_ttag<Point_tag>,Compute_point_cartesian_coordinate_tag,Squared_distance_tag,Squared_distance_to_origin_tag,Point_dimension_tag));
-CGAL_KD_DEFAULT_FUNCTOR(Center_of_sphere_tag,(CartesianDKernelFunctors::Center_of_sphere<K>),(Sphere_tag,Point_tag),(Construct_ttag<Sphere_tag>));
-CGAL_KD_DEFAULT_FUNCTOR(Squared_radius_tag,(CartesianDKernelFunctors::Squared_radius<K>),(Sphere_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Point_of_sphere_tag,(CartesianDKernelFunctors::Point_of_sphere<K>),(Sphere_tag,Point_tag),(Construct_ttag<Point_tag>, Construct_ttag<Point_cartesian_const_iterator_tag>));
-} // namespace CGAL
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Types/Weighted_point.h b/include/gudhi_patches/CGAL/NewKernel_d/Types/Weighted_point.h
deleted file mode 100644
index 1caf8701..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Types/Weighted_point.h
+++ /dev/null
@@ -1,205 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_TYPE_WP_H
-#define CGAL_KD_TYPE_WP_H
-#include <CGAL/NewKernel_d/store_kernel.h>
-#include <boost/iterator/counting_iterator.hpp>
-namespace CGAL {
-namespace KerD {
-template <class R_> class Weighted_point {
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- Point_ c_;
- FT_ w_;
-
- public:
- Weighted_point(Point_ const&p, FT_ const&w): c_(p), w_(w) {}
- // TODO: Add a piecewise constructor?
-
- Point_ const& point()const{return c_;}
- FT_ const& weight()const{return w_;}
-};
-}
-
-namespace CartesianDKernelFunctors {
-template <class R_> struct Construct_weighted_point : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_weighted_point)
- typedef typename Get_type<R_, Weighted_point_tag>::type result_type;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, FT_tag>::type FT;
- result_type operator()(Point const&a, FT const&b)const{
- return result_type(a,b);
- }
- // Not really needed
- result_type operator()()const{
- typename Get_functor<R_, Construct_ttag<Point_tag> >::type cp(this->kernel());
- return result_type(cp(),0);
- }
-};
-
-template <class R_> struct Point_drop_weight {
- CGAL_FUNCTOR_INIT_IGNORE(Point_drop_weight)
- typedef typename Get_type<R_, Weighted_point_tag>::type argument_type;
- typedef typename Get_type<R_, Point_tag>::type const& result_type;
- // Returning a reference is fragile
-
- result_type operator()(argument_type const&s)const{
- return s.point();
- }
-};
-
-template <class R_> struct Point_weight {
- CGAL_FUNCTOR_INIT_IGNORE(Point_weight)
- typedef typename Get_type<R_, Weighted_point_tag>::type argument_type;
- typedef typename Get_type<R_, FT_tag>::type result_type;
-
- result_type operator()(argument_type const&s)const{
- return s.weight();
- }
-};
-
-template <class R_> struct Power_distance : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Power_distance)
- typedef typename Get_type<R_, Weighted_point_tag>::type first_argument_type;
- typedef first_argument_type second_argument_type;
- typedef typename Get_type<R_, FT_tag>::type result_type;
-
- result_type operator()(first_argument_type const&a, second_argument_type const&b)const{
- typename Get_functor<R_, Point_drop_weight_tag>::type pdw(this->kernel());
- typename Get_functor<R_, Point_weight_tag>::type pw(this->kernel());
- typename Get_functor<R_, Squared_distance_tag>::type sd(this->kernel());
- return sd(pdw(a),pdw(b))-pw(a)-pw(b);
- }
-};
-template <class R_> struct Power_distance_to_point : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Power_distance_to_point)
- typedef typename Get_type<R_, Weighted_point_tag>::type first_argument_type;
- typedef typename Get_type<R_, Point_tag>::type second_argument_type;
- typedef typename Get_type<R_, FT_tag>::type result_type;
-
- result_type operator()(first_argument_type const&a, second_argument_type const&b)const{
- typename Get_functor<R_, Point_drop_weight_tag>::type pdw(this->kernel());
- typename Get_functor<R_, Point_weight_tag>::type pw(this->kernel());
- typename Get_functor<R_, Squared_distance_tag>::type sd(this->kernel());
- return sd(pdw(a),b)-pw(a);
- }
-};
-
-template<class R_> struct Power_side_of_power_sphere : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Power_side_of_power_sphere)
- typedef R_ R;
- typedef typename Get_type<R, Oriented_side_tag>::type result_type;
-
- template<class Iter, class Pt>
- result_type operator()(Iter const& f, Iter const& e, Pt const& p0) const {
- typename Get_functor<R, Power_side_of_power_sphere_raw_tag>::type ptr(this->kernel());
- typename Get_functor<R, Point_drop_weight_tag>::type pdw(this->kernel());
- typename Get_functor<R, Point_weight_tag>::type pw(this->kernel());
- return ptr (
- make_transforming_iterator (f, pdw),
- make_transforming_iterator (e, pdw),
- make_transforming_iterator (f, pw),
- pdw (p0),
- pw (p0));
- }
-};
-
-template<class R_> struct In_flat_power_side_of_power_sphere : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(In_flat_power_side_of_power_sphere)
- typedef R_ R;
- typedef typename Get_type<R, Oriented_side_tag>::type result_type;
-
- template<class Fo, class Iter, class Pt>
- result_type operator()(Fo const& fo, Iter const& f, Iter const& e, Pt const& p0) const {
- typename Get_functor<R, In_flat_power_side_of_power_sphere_raw_tag>::type ptr(this->kernel());
- typename Get_functor<R, Point_drop_weight_tag>::type pdw(this->kernel());
- typename Get_functor<R, Point_weight_tag>::type pw(this->kernel());
- return ptr (
- fo,
- make_transforming_iterator (f, pdw),
- make_transforming_iterator (e, pdw),
- make_transforming_iterator (f, pw),
- pdw (p0),
- pw (p0));
- }
-};
-
-// Construct a point at (weighted) distance 0 from all the input
-template <class R_> struct Power_center : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Power_center)
- typedef typename Get_type<R_, Weighted_point_tag>::type WPoint;
- typedef WPoint result_type;
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename Get_type<R_, FT_tag>::type FT;
- template <class Iter>
- result_type operator()(Iter f, Iter e)const{
- // 2*(x-y).c == (x^2-wx^2)-(y^2-wy^2)
- typedef typename R_::LA LA;
- typedef typename LA::Square_matrix Matrix;
- typedef typename LA::Vector Vec;
- typedef typename LA::Construct_vector CVec;
- typename Get_functor<R_, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R_, Construct_ttag<Point_tag> >::type cp(this->kernel());
- typename Get_functor<R_, Point_dimension_tag>::type pd(this->kernel());
- typename Get_functor<R_, Squared_distance_to_origin_tag>::type sdo(this->kernel());
- typename Get_functor<R_, Power_distance_to_point_tag>::type pdp(this->kernel());
- typename Get_functor<R_, Point_drop_weight_tag>::type pdw(this->kernel());
- typename Get_functor<R_, Point_weight_tag>::type pw(this->kernel());
- typename Get_functor<R_, Construct_ttag<Weighted_point_tag> >::type cwp(this->kernel());
-
- WPoint const& wp0 = *f;
- Point const& p0 = pdw(wp0);
- int d = pd(p0);
- FT const& n0 = sdo(p0) - pw(wp0);
- Matrix m(d,d);
- Vec b = typename CVec::Dimension()(d);
- // Write the point coordinates in lines.
- int i;
- for(i=0; ++f!=e; ++i) {
- WPoint const& wp=*f;
- Point const& p=pdw(wp);
- FT const& np = sdo(p) - pw(wp);
- for(int j=0;j<d;++j) {
- m(i,j)=2*(c(p,j)-c(p0,j));
- b[i] = np - n0;
- }
- }
- CGAL_assertion (i == d);
- Vec res = typename CVec::Dimension()(d);;
- //std::cout << "Mat: " << m << "\n Vec: " << one << std::endl;
- LA::solve(res, CGAL_MOVE(m), CGAL_MOVE(b));
- //std::cout << "Sol: " << res << std::endl;
- Point center = cp(d,LA::vector_begin(res),LA::vector_end(res));
- FT const& r2 = pdp (wp0, center);
- return cwp(CGAL_MOVE(center), r2);
- }
-};
-}
-CGAL_KD_DEFAULT_TYPE(Weighted_point_tag,(CGAL::KerD::Weighted_point<K>),(Point_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Construct_ttag<Weighted_point_tag>,(CartesianDKernelFunctors::Construct_weighted_point<K>),(Weighted_point_tag,Point_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Point_drop_weight_tag,(CartesianDKernelFunctors::Point_drop_weight<K>),(Weighted_point_tag,Point_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Point_weight_tag,(CartesianDKernelFunctors::Point_weight<K>),(Weighted_point_tag,Point_tag),());
-CGAL_KD_DEFAULT_FUNCTOR(Power_side_of_power_sphere_tag,(CartesianDKernelFunctors::Power_side_of_power_sphere<K>),(Weighted_point_tag),(Power_side_of_power_sphere_raw_tag,Point_drop_weight_tag,Point_weight_tag));
-CGAL_KD_DEFAULT_FUNCTOR(In_flat_power_side_of_power_sphere_tag,(CartesianDKernelFunctors::In_flat_power_side_of_power_sphere<K>),(Weighted_point_tag),(In_flat_power_side_of_power_sphere_raw_tag,Point_drop_weight_tag,Point_weight_tag));
-CGAL_KD_DEFAULT_FUNCTOR(Power_distance_tag,(CartesianDKernelFunctors::Power_distance<K>),(Weighted_point_tag,Point_tag),(Squared_distance_tag,Point_drop_weight_tag,Point_weight_tag));
-CGAL_KD_DEFAULT_FUNCTOR(Power_distance_to_point_tag,(CartesianDKernelFunctors::Power_distance_to_point<K>),(Weighted_point_tag,Point_tag),(Squared_distance_tag,Point_drop_weight_tag,Point_weight_tag));
-CGAL_KD_DEFAULT_FUNCTOR(Power_center_tag,(CartesianDKernelFunctors::Power_center<K>),(Weighted_point_tag,Point_tag),(Compute_point_cartesian_coordinate_tag,Construct_ttag<Point_tag>,Construct_ttag<Weighted_point_tag>,Point_dimension_tag,Squared_distance_to_origin_tag,Point_drop_weight_tag,Point_weight_tag,Power_distance_to_point_tag));
-} // namespace CGAL
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/array.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/array.h
deleted file mode 100644
index 0ad9bb36..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/array.h
+++ /dev/null
@@ -1,165 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_ARRAY_H
-#define CGAL_VECTOR_ARRAY_H
-#include <boost/type_traits/is_arithmetic.hpp>
-#include <boost/utility/enable_if.hpp>
-#include <CGAL/Dimension.h>
-#include <CGAL/NewKernel_d/utils.h>
-#include <CGAL/array.h>
-#include <boost/preprocessor/repetition.hpp>
-#include <boost/preprocessor/repetition/enum.hpp>
-
-#include <CGAL/NewKernel_d/Vector/determinant_of_points_from_vectors.h>
-#include <CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim.h>
-#include <CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_iterator_to_vectors.h>
-#include <CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_points.h>
-#include <CGAL/NewKernel_d/Vector/determinant_of_iterator_to_vectors_from_vectors.h>
-
-
-
-namespace CGAL {
-
-// May not be safe to use with dim!=max_dim.
-// In that case, we should store the real dim next to the array.
-template<class NT_,class Dim_,class Max_dim_=Dim_> struct Array_vector {
- typedef NT_ NT;
- typedef Dim_ Dimension;
- typedef Max_dim_ Max_dimension;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef Array_vector< NT, D2, D3 > Other;
- };
- template<class> struct Property : boost::false_type {};
-
- static const unsigned d_=Max_dim_::value;
- CGAL_static_assertion(d_ != (unsigned)UNKNOWN_DIMENSION);
-
- typedef cpp0x::array<NT,d_> Vector;
- struct Construct_vector {
- struct Dimension {
- // Initialize with NaN if possible?
- Vector operator()(unsigned CGAL_assertion_code(d)) const {
- CGAL_assertion(d<=d_);
- return Vector();
- }
- };
-
- struct Iterator {
- template<typename Iter>
- Vector operator()(unsigned CGAL_assertion_code(d),Iter const& f,Iter const& e) const {
- CGAL_assertion(d==(unsigned) std::distance(f,e));
- CGAL_assertion(d<=d_);
- //TODO: optimize for forward iterators
- Vector a;
- std::copy(f,e,a.begin());
- return a;
- }
- };
-
-#if 0
- struct Iterator_add_one {
- template<typename Iter>
- Vector operator()(unsigned d,Iter const& f,Iter const& e) const {
- CGAL_assertion(d==std::distance(f,e)+1);
- CGAL_assertion(d<=d_);
- //TODO: optimize
- Vector a;
- std::copy(f,e,a.begin());
- a.back()=1;
- return a;
- }
- };
-#endif
-
- struct Iterator_and_last {
- template<typename Iter,typename T>
- Vector operator()(unsigned CGAL_assertion_code(d),Iter const& f,Iter const& e,CGAL_FORWARDABLE(T) t) const {
- CGAL_assertion(d==std::distance(f,e)+1);
- CGAL_assertion(d<=d_);
- //TODO: optimize for forward iterators
- Vector a;
- std::copy(f,e,a.begin());
- a.back()=CGAL_FORWARD(T,t);
- return a;
- }
- };
-
- struct Values {
-#ifdef CGAL_CXX11
- template<class...U>
- Vector operator()(U&&...u) const {
- static_assert(sizeof...(U)<=d_,"too many arguments");
- Vector a={{forward_safe<NT,U>(u)...}};
- return a;
- }
-#else
-
-#define CGAL_CODE(Z,N,_) Vector operator()(BOOST_PP_ENUM_PARAMS(N,NT const& t)) const { \
- CGAL_assertion(N<=d_); \
- Vector a={{BOOST_PP_ENUM_PARAMS(N,t)}}; \
- return a; \
-}
-BOOST_PP_REPEAT_FROM_TO(1, 11, CGAL_CODE, _ )
-#undef CGAL_CODE
-
-#endif
- };
-
- struct Values_divide {
-#ifdef CGAL_CXX11
- template<class H,class...U>
- Vector operator()(H const& h,U&&...u) const {
- static_assert(sizeof...(U)<=d_,"too many arguments");
- Vector a={{Rational_traits<NT>().make_rational(std::forward<U>(u),h)...}};
- return a;
- }
-#else
-
-#define CGAL_VAR(Z,N,_) Rational_traits<NT>().make_rational( t##N , h)
-#define CGAL_CODE(Z,N,_) template <class H> Vector \
- operator()(H const&h, BOOST_PP_ENUM_PARAMS(N,NT const& t)) const { \
- CGAL_assertion(N<=d_); \
- Vector a={{BOOST_PP_ENUM(N,CGAL_VAR,_)}}; \
- return a; \
- }
- BOOST_PP_REPEAT_FROM_TO(1, 11, CGAL_CODE, _ )
-#undef CGAL_CODE
-#undef CGAL_VAR
-
-#endif
- };
- };
-
- typedef NT const* Vector_const_iterator;
- static Vector_const_iterator vector_begin(Vector const&a){
- return &a[0];
- }
- static Vector_const_iterator vector_end(Vector const&a){
- return &a[0]+d_; // Don't know the real size
- }
- static unsigned size_of_vector(Vector const&){
- return d_; // Don't know the real size
- }
-
-};
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/avx4.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/avx4.h
deleted file mode 100644
index 954a3c1b..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/avx4.h
+++ /dev/null
@@ -1,213 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_AVX4_H
-#define CGAL_VECTOR_AVX4_H
-
-#if !defined __AVX__ || (__GNUC__ * 100 + __GNUC_MINOR__ < 408)
-#error Requires AVX and gcc 4.8+
-#endif
-#include <x86intrin.h>
-
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/enum.h> // CGAL::Sign
-#include <CGAL/number_utils.h> // CGAL::sign
-
-
-
-namespace CGAL {
-
- struct Avx_vector_4 {
- typedef double NT;
- typedef Dimension_tag<4> Dimension;
- typedef Dimension_tag<4> Max_dimension;
- // No Rebind_dimension, this is a building block
- template<class,bool=true> struct Property : boost::false_type {};
- template<bool b> struct Property<Has_vector_plus_minus_tag,b>
- : boost::true_type {};
- /* MAYBE?
- template<bool b> struct Property<Has_vector_scalar_ops_tag,b>
- : boost::true_type {};
- */
- template<bool b> struct Property<Has_determinant_of_vectors_tag,b>
- : boost::true_type {};
- template<bool b> struct Property<Has_dot_product_tag,b>
- : boost::true_type {};
- template<bool b> struct Property<Has_determinant_of_vectors_omit_last_tag,b>
- : boost::true_type {};
-
- typedef __m256d Vector;
- struct Construct_vector {
- struct Dimension {
- // Initialize with NaN?
- Vector operator()(unsigned d) const {
- CGAL_assertion(d==4);
- return Vector();
- }
- };
-
- struct Iterator {
- template<typename Iter>
- Vector operator()(unsigned d,Iter const& f,Iter const& e) const {
- CGAL_assertion(d==4);
- double x0 = *f;
- double x1 = *++f;
- double x2 = *++f;
- double x3 = *++f;
- CGAL_assertion(++f==e);
- Vector a = { x0, x1, x2, x3 };
- return a;
- }
- };
-
- struct Iterator_and_last {
- template<typename Iter,typename T>
- Vector operator()(unsigned d,Iter const& f,Iter const& e,double t) const {
- CGAL_assertion(d==4);
- double x0 = *f;
- double x1 = *++f;
- double x2 = *++f;
- CGAL_assertion(++f==e);
- Vector a = { x0, x1, x2, t };
- return a;
- }
- };
-
- struct Values {
- Vector operator()(double a,double b,double c,double d) const {
- Vector r = { a, b, c, d };
- return r;
- }
- };
-
- struct Values_divide {
- Vector operator()(double h,double a,double b,double c,double d) const {
- // {a,b,c,d}/{h,h,h,h} should be roughly the same
- Vector r = { a/h, b/h, c/h, d/h };
- return r;
- }
- };
- };
-
- public:
- typedef double const* Vector_const_iterator;
- static inline Vector_const_iterator vector_begin(Vector const&a){
- return (Vector_const_iterator)(&a);
- }
- static inline Vector_const_iterator vector_end(Vector const&a){
- return (Vector_const_iterator)(&a)+4;
- }
- static inline unsigned size_of_vector(Vector){
- return 4;
- }
- static inline double dot_product(__m256d x, __m256d y){
- __m256d p=x*y;
- __m256d z=_mm256_hadd_pd(p,p);
- return z[0]+z[2];
- }
- private:
- static inline __m256d avx_sym(__m256d x){
-#if 0
- return __builtin_shuffle(x,(__m256i){2,3,0,1});
-#else
- return _mm256_permute2f128_pd(x,x,1);
-#endif
- }
- static inline __m256d avx_left(__m256d x){
-#if 0
- return __builtin_shuffle(x,(__m256i){1,2,3,0});
-#else
-#ifdef __AVX2__
- return _mm256_permute4x64_pd(x,1+2*4+3*16+0*64);
-#else
- __m256d s = _mm256_permute2f128_pd(x,x,1);
- return _mm256_shuffle_pd(x,s,5);
-#endif
-#endif
- }
- static inline __m256d avx_right(__m256d x){
-#if 0
- return __builtin_shuffle(x,(__m256i){3,0,1,2});
-#else
-#ifdef __AVX2__
- return _mm256_permute4x64_pd(x,3+0*4+1*16+2*64);
-#else
- __m256d s = _mm256_permute2f128_pd(x,x,1);
- return _mm256_shuffle_pd(s,x,5);
-#endif
-#endif
- }
- static inline double avx_altprod(__m256d x, __m256d y){
- __m256d p=x*y;
- __m256d z=_mm256_hsub_pd(p,p);
- return z[0]+z[2];
- }
- public:
- static double
- determinant_of_vectors(Vector a, Vector b, Vector c, Vector d) {
- __m256d x=a*avx_left(b)-avx_left(a)*b;
- __m256d yy=a*avx_sym(b);
- __m256d y=yy-avx_sym(yy);
- __m256d z0=x*avx_sym(c);
- __m256d z1=avx_left(x)*c;
- __m256d z2=y*avx_left(c);
- __m256d z=z0+z1-z2;
- return avx_altprod(z,avx_right(d));
- }
- static CGAL::Sign
- sign_of_determinant_of_vectors(Vector a, Vector b, Vector c, Vector d) {
- return CGAL::sign(determinant_of_vectors(a,b,c,d));
- }
-
- private:
- static inline __m256d avx3_right(__m256d x){
-#if 0
- return __builtin_shuffle(x,(__m256i){2,0,1,3}); // can replace 3 with anything
-#else
-#ifdef __AVX2__
- return _mm256_permute4x64_pd(x,2+0*4+1*16+3*64);
-#else
- __m256d s = _mm256_permute2f128_pd(x,x,1);
- return _mm256_shuffle_pd(s,x,12);
-#endif
-#endif
- }
- public:
- static inline double dot_product_omit_last(__m256d x, __m256d y){
- __m256d p=x*y;
- __m128d q=_mm256_extractf128_pd(p,0);
- double z=_mm_hadd_pd(q,q)[0];
- return z+p[2];
- }
- // Note: without AVX2, is it faster than the scalar computation?
- static double
- determinant_of_vectors_omit_last(Vector a, Vector b, Vector c) {
- __m256d x=a*avx3_right(b)-avx3_right(a)*b;
- return dot_product_omit_last(c,avx3_right(x));
- }
- static CGAL::Sign
- sign_of_determinant_of_vectors_omit_last(Vector a, Vector b, Vector c) {
- return CGAL::sign(determinant_of_vectors_omit_last(a,b,c));
- }
-
- };
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_iterator_to_vectors.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_iterator_to_vectors.h
deleted file mode 100644
index b8efbe28..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_iterator_to_vectors.h
+++ /dev/null
@@ -1,76 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_DET_ITER_PTS_ITER_VEC_H
-#define CGAL_VECTOR_DET_ITER_PTS_ITER_VEC_H
-#include <functional>
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-
-namespace CGAL {
-
-template <class LA, class Dim_=typename LA::Dimension,
- class Max_dim_=typename LA::Max_dimension,
- bool = LA::template Property<Has_determinant_of_iterator_to_points_tag>::value,
- bool = LA::template Property<Has_determinant_of_iterator_to_vectors_tag>::value>
-struct Add_determinant_of_iterator_to_points_from_iterator_to_vectors : LA {
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_points_from_iterator_to_vectors<LA2> Other;
- };
-};
-
-template <class LA, class Dim_,class Max_dim_>
-struct Add_determinant_of_iterator_to_points_from_iterator_to_vectors
-<LA, Dim_, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_points_from_iterator_to_vectors<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_points_tag, D> :
- boost::true_type {};
-
- // TODO: use std::minus, boost::bind, etc
- template<class T> struct Minus_fixed {
- T const& a;
- Minus_fixed(T const&a_):a(a_){}
- T operator()(T const&b)const{return b-a;}
- };
- template<class Iter>
- static NT determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Minus_fixed<Vector> f(a);
- return LA::determinant_of_iterator_to_vectors(make_transforming_iterator(first,f),make_transforming_iterator(end,f));
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Minus_fixed<Vector> f(a);
- return LA::sign_of_determinant_of_iterator_to_vectors(make_transforming_iterator(first,f),make_transforming_iterator(end,f));
- }
-};
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_points.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_points.h
deleted file mode 100644
index 71a31d81..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_points_from_points.h
+++ /dev/null
@@ -1,211 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_DET_ITER_PTS_PTS_H
-#define CGAL_VECTOR_DET_ITER_PTS_PTS_H
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-
-namespace CGAL {
-
-template <class LA, class Dim_=typename LA::Dimension,
- class Max_dim_=typename LA::Max_dimension,
- bool = LA::template Property<Has_determinant_of_iterator_to_points_tag>::value,
- bool = LA::template Property<Has_determinant_of_points_tag>::value>
-struct Add_determinant_of_iterator_to_points_from_points : LA {
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_points_from_points<LA2> Other;
- };
-};
-
-//FIXME: Use variadics and boost so it works in any dimension.
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_points_from_points
-<LA, Dimension_tag<2>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_points_from_points<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_points_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_points(a,b,c);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_points(a,b,c);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_points_from_points
-<LA, Dimension_tag<3>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_points_from_points<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_points_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_points(a,b,c,d);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_points(a,b,c,d);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_points_from_points
-<LA, Dimension_tag<4>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_points_from_points<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_points_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_points(a,b,c,d,e);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_points(a,b,c,d,e);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_points_from_points
-<LA, Dimension_tag<5>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_points_from_points<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_points_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; ++first;
- Vector const&f=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_points(a,b,c,d,e,f);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; ++first;
- Vector const&f=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_points(a,b,c,d,e,f);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_points_from_points
-<LA, Dimension_tag<6>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_points_from_points<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_points_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; ++first;
- Vector const&f=*first; ++first;
- Vector const&g=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_points(a,b,c,d,e,f,g);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_points(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; ++first;
- Vector const&f=*first; ++first;
- Vector const&g=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_points(a,b,c,d,e,f,g);
- }
-};
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_vectors_from_vectors.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_vectors_from_vectors.h
deleted file mode 100644
index f096d6c7..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_iterator_to_vectors_from_vectors.h
+++ /dev/null
@@ -1,201 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_DET_ITER_VEC_VEC_H
-#define CGAL_VECTOR_DET_ITER_VEC_VEC_H
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-
-namespace CGAL {
-
-template <class LA, class Dim_=typename LA::Dimension,
- class Max_dim_=typename LA::Max_dimension,
- bool = LA::template Property<Has_determinant_of_iterator_to_vectors_tag>::value,
- bool = LA::template Property<Has_determinant_of_vectors_tag>::value>
-struct Add_determinant_of_iterator_to_vectors_from_vectors : LA {
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_vectors_from_vectors<LA2> Other;
- };
-};
-
-//FIXME: Use variadics and boost so it works in any dimension.
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_vectors_from_vectors
-<LA, Dimension_tag<2>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_vectors_from_vectors<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_vectors_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_vectors(a,b);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_vectors(a,b);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_vectors_from_vectors
-<LA, Dimension_tag<3>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_vectors_from_vectors<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_vectors_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_vectors(a,b,c);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_vectors(a,b,c);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_vectors_from_vectors
-<LA, Dimension_tag<4>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_vectors_from_vectors<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_vectors_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_vectors(a,b,c,d);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_vectors(a,b,c,d);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_vectors_from_vectors
-<LA, Dimension_tag<5>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_vectors_from_vectors<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_vectors_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_vectors(a,b,c,d,e);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_vectors(a,b,c,d,e);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_iterator_to_vectors_from_vectors
-<LA, Dimension_tag<6>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_iterator_to_vectors_from_vectors<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_iterator_to_vectors_tag, D> :
- boost::true_type {};
-
- template<class Iter>
- static NT determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; ++first;
- Vector const&f=*first; CGAL_assertion(++first==end);
- return LA::determinant_of_vectors(a,b,c,d,e,f);
- }
- template<class Iter>
- static Sign sign_of_determinant_of_iterator_to_vectors(Iter const&first, Iter const&end){
- Vector const&a=*first; ++first;
- Vector const&b=*first; ++first;
- Vector const&c=*first; ++first;
- Vector const&d=*first; ++first;
- Vector const&e=*first; ++first;
- Vector const&f=*first; CGAL_assertion(++first==end);
- return LA::sign_of_determinant_of_vectors(a,b,c,d,e,f);
- }
-};
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_points_from_vectors.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_points_from_vectors.h
deleted file mode 100644
index 7ddb73c3..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_points_from_vectors.h
+++ /dev/null
@@ -1,164 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_DETPTS_H
-#define CGAL_VECTOR_DETPTS_H
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-
-namespace CGAL {
-
-template <class LA, class Dim_=typename LA::Dimension,
- class Max_dim_=typename LA::Max_dimension,
- bool = LA::template Property<Has_determinant_of_points_tag>::value,
- bool = LA::template Property<Has_determinant_of_vectors_tag>::value
- && LA::template Property<Has_vector_plus_minus_tag>::value>
-struct Add_determinant_of_points_from_vectors_and_minus : LA {
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_points_from_vectors_and_minus<LA2> Other;
- };
-};
-
-//FIXME: Use variadics and boost so it works in any dimension.
-template <class LA, class Max_dim_>
-struct Add_determinant_of_points_from_vectors_and_minus
-<LA, Dimension_tag<2>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_points_from_vectors_and_minus<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_points_tag, D> :
- boost::true_type {};
-
- static NT determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c){
- return LA::determinant_of_vectors(b-a,c-a);
- }
- static Sign sign_of_determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c){
- return LA::sign_of_determinant_of_vectors(b-a,c-a);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_points_from_vectors_and_minus
-<LA, Dimension_tag<3>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_points_from_vectors_and_minus<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_points_tag, D> :
- boost::true_type {};
-
- static NT determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d){
- return LA::determinant_of_vectors(b-a,c-a,d-a);
- }
- static Sign sign_of_determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d){
- return LA::sign_of_determinant_of_vectors(b-a,c-a,d-a);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_points_from_vectors_and_minus
-<LA, Dimension_tag<4>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_points_from_vectors_and_minus<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_points_tag, D> :
- boost::true_type {};
-
- static NT determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e){
- return LA::determinant_of_vectors(b-a,c-a,d-a,e-a);
- }
- static Sign sign_of_determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e){
- return LA::sign_of_determinant_of_vectors(b-a,c-a,d-a,e-a);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_points_from_vectors_and_minus
-<LA, Dimension_tag<5>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_points_from_vectors_and_minus<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_points_tag, D> :
- boost::true_type {};
-
- static NT determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e, Vector const&f){
- return LA::determinant_of_vectors(b-a,c-a,d-a,e-a,f-a);
- }
- static Sign sign_of_determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e, Vector const&f){
- return LA::sign_of_determinant_of_vectors(b-a,c-a,d-a,e-a,f-a);
- }
-};
-
-template <class LA, class Max_dim_>
-struct Add_determinant_of_points_from_vectors_and_minus
-<LA, Dimension_tag<6>, Max_dim_, false, true> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef Add_determinant_of_points_from_vectors_and_minus<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<Has_determinant_of_points_tag, D> :
- boost::true_type {};
-
- static NT determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e, Vector const&f,
- Vector const&g){
- return LA::determinant_of_vectors(b-a,c-a,d-a,e-a,f-a,g-a);
- }
- static Sign sign_of_determinant_of_points(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e, Vector const&f,
- Vector const&g){
- return LA::sign_of_determinant_of_vectors(b-a,c-a,d-a,e-a,f-a,g-a);
- }
-};
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim.h
deleted file mode 100644
index 64eafe69..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim.h
+++ /dev/null
@@ -1,58 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_DETVEC_SMALL_H
-#define CGAL_VECTOR_DETVEC_SMALL_H
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/determinant_of_vectors.h>
-
-#define CGAL_ALLOWED_INCLUSION 1
-
-#define CGAL_CLASS Add_determinant_of_vectors_small_dim
-#define CGAL_TAG Has_determinant_of_vectors_tag
-#define CGAL_FUNC determinant_of_vectors
-#define CGAL_SIGN_FUNC sign_of_determinant_of_vectors
-#define CGAL_SHIFT 0
-
-#include <CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim_internal.h>
-
-#undef CGAL_CLASS
-#undef CGAL_TAG
-#undef CGAL_FUNC
-#undef CGAL_SIGN_FUNC
-#undef CGAL_SHIFT
-
-#define CGAL_CLASS Add_determinant_of_vectors_omit_last_small_dim
-#define CGAL_TAG Has_determinant_of_vectors_omit_last_tag
-#define CGAL_FUNC determinant_of_vectors_omit_last
-#define CGAL_SIGN_FUNC sign_of_determinant_of_vectors_omit_last
-#define CGAL_SHIFT 1
-
-#include <CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim_internal.h>
-
-#undef CGAL_CLASS
-#undef CGAL_TAG
-#undef CGAL_FUNC
-#undef CGAL_SIGN_FUNC
-#undef CGAL_SHIFT
-
-#undef CGAL_ALLOWED_INCLUSION
-
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim_internal.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim_internal.h
deleted file mode 100644
index b4856742..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/determinant_of_vectors_small_dim_internal.h
+++ /dev/null
@@ -1,164 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_ALLOWED_INCLUSION
-#error Must not include this header directly
-#endif
-#if !defined(CGAL_TAG) \
- || ! defined(CGAL_CLASS) \
- || ! defined(CGAL_FUNC) \
- || ! defined(CGAL_SIGN_FUNC) \
- || ! defined(CGAL_SHIFT)
-
-#error Forgot one macro
-#endif
-
-namespace CGAL {
-
-template <class LA, class Dim_=typename LA::Dimension,
- class Max_dim_=typename LA::Max_dimension,
- bool=LA::template Property<CGAL_TAG>::value>
-struct CGAL_CLASS : LA {
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef CGAL_CLASS<LA2> Other;
- };
-};
-
-template <class LA, class Max_dim_>
-struct CGAL_CLASS
-<LA, Dimension_tag<2+CGAL_SHIFT>, Max_dim_, false> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef CGAL_CLASS<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<CGAL_TAG, D> :
- boost::true_type {};
-
- static NT CGAL_FUNC(Vector const&a, Vector const&b){
- return CGAL::determinant_of_vectors<NT>(a,b);
- }
- template <class V1, class V2>
- static Sign CGAL_SIGN_FUNC(V1 const&a, V2 const&b){
- return CGAL::sign_of_determinant_of_vectors<NT>(a,b);
- }
-};
-
-template <class LA, class Max_dim_>
-struct CGAL_CLASS
-<LA, Dimension_tag<3+CGAL_SHIFT>, Max_dim_, false> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef CGAL_CLASS<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<CGAL_TAG, D> :
- boost::true_type {};
-
- static NT CGAL_FUNC(Vector const&a, Vector const&b,
- Vector const&c){
- return CGAL::determinant_of_vectors<NT>(a,b,c);
- }
- static Sign CGAL_SIGN_FUNC(Vector const&a, Vector const&b,
- Vector const&c){
- return CGAL::sign_of_determinant_of_vectors<NT>(a,b,c);
- }
-};
-
-template <class LA, class Max_dim_>
-struct CGAL_CLASS
-<LA, Dimension_tag<4+CGAL_SHIFT>, Max_dim_, false> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef CGAL_CLASS<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<CGAL_TAG, D> :
- boost::true_type {};
-
- static NT CGAL_FUNC(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d){
- return CGAL::determinant_of_vectors<NT>(a,b,c,d);
- }
- static Sign CGAL_SIGN_FUNC(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d){
- return CGAL::sign_of_determinant_of_vectors<NT>(a,b,c,d);
- }
-};
-
-template <class LA, class Max_dim_>
-struct CGAL_CLASS
-<LA, Dimension_tag<5+CGAL_SHIFT>, Max_dim_, false> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef CGAL_CLASS<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<CGAL_TAG, D> :
- boost::true_type {};
-
- static NT CGAL_FUNC(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e){
- return CGAL::determinant_of_vectors<NT>(a,b,c,d,e);
- }
- static Sign CGAL_SIGN_FUNC(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e){
- return CGAL::sign_of_determinant_of_vectors<NT>(a,b,c,d,e);
- }
-};
-
-template <class LA, class Max_dim_>
-struct CGAL_CLASS
-<LA, Dimension_tag<6+CGAL_SHIFT>, Max_dim_, false> : LA {
- typedef typename LA::NT NT;
- typedef typename LA::Vector Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef typename LA::template Rebind_dimension<D2,D3> LA2;
- typedef CGAL_CLASS<LA2> Other;
- };
- template<class P,class=void> struct Property : LA::template Property<P> {};
- template<class D> struct Property<CGAL_TAG, D> :
- boost::true_type {};
-
- static NT CGAL_FUNC(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e, Vector const&f){
- return CGAL::determinant_of_vectors<NT>(a,b,c,d,e,f);
- }
- static Sign CGAL_SIGN_FUNC(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e, Vector const&f){
- return CGAL::sign_of_determinant_of_vectors<NT>(a,b,c,d,e,f);
- }
-};
-
-}
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/mix.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/mix.h
deleted file mode 100644
index d4cfeeb1..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/mix.h
+++ /dev/null
@@ -1,46 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KD_MIX_VECTOR_H
-#define CGAL_KD_MIX_VECTOR_H
-#include <CGAL/Dimension.h>
-namespace CGAL {
-
-template <class Static_, class Dynamic_, class NT_ ,class Dim_, class Max_dim_ = Dim_>
-struct Mix_vector
-: Dynamic_::template Rebind_dimension<Dim_, Max_dim_>::Other
-{
- template <class D2, class D3 = D2>
- struct Rebind_dimension {
- typedef Mix_vector<Static_, Dynamic_, NT_, D2, D3> Other;
- };
-};
-
-template <class Static_, class Dynamic_, class NT_, int d, class Max_dim_>
-struct Mix_vector<Static_, Dynamic_, NT_, Dimension_tag<d>, Max_dim_>
-: Static_::template Rebind_dimension<Dimension_tag<d>, Max_dim_>::Other
-{
- template <class D2, class D3 = D2>
- struct Rebind_dimension {
- typedef Mix_vector<Static_, Dynamic_, NT_, D2, D3> Other;
- };
-};
-}
-#endif
-
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/sse2.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/sse2.h
deleted file mode 100644
index 2a75385c..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/sse2.h
+++ /dev/null
@@ -1,145 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_SSE2_H
-#define CGAL_VECTOR_SSE2_H
-
-// Check what needs adapting for clang, intel and microsoft
-#if !defined __SSE2__ || (__GNUC__ * 100 + __GNUC_MINOR__ < 408)
-#error Requires SSE2 and gcc 4.8+
-#endif
-#include <x86intrin.h> // FIXME: other platforms call it differently
-
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/enum.h> // CGAL::Sign
-#include <CGAL/number_utils.h> // CGAL::sign
-
-
-
-namespace CGAL {
-
- struct Sse_vector_2 {
- typedef double NT;
- typedef Dimension_tag<2> Dimension;
- typedef Dimension_tag<2> Max_dimension;
- // No Rebind_dimension, this is a building block
- template<class,bool=true> struct Property : boost::false_type {};
- template<bool b> struct Property<Has_vector_plus_minus_tag,b>
- : boost::true_type {};
- /* MAYBE?
- template<bool b> struct Property<Has_vector_scalar_ops_tag,b>
- : boost::true_type {};
- */
- template<bool b> struct Property<Has_determinant_of_vectors_tag,b>
- : boost::true_type {};
- template<bool b> struct Property<Has_dot_product_tag,b>
- : boost::true_type {};
-
- typedef __m128d Vector;
- struct Construct_vector {
- struct Dimension {
- // Initialize with NaN?
- Vector operator()(unsigned d) const {
- CGAL_assertion(d==2);
- return Vector();
- }
- };
-
- struct Iterator {
- template<typename Iter>
- Vector operator()(unsigned d,Iter const& f,Iter const& e) const {
- CGAL_assertion(d==2);
- double x0 = *f;
- double x1 = *++f;
- CGAL_assertion(++f==e);
- Vector a = { x0, x1 };
- return a;
- }
- };
-
- struct Iterator_and_last {
- template<typename Iter,typename T>
- Vector operator()(unsigned d,Iter const& f,Iter const& e,double t) const {
- CGAL_assertion(d==2);
- Vector a = { *f, t };
- CGAL_assertion(++f==e);
- return a;
- }
- };
-
- struct Values {
- Vector operator()(double a,double b) const {
- Vector r = { a, b };
- return r;
- }
- };
-
- struct Values_divide {
- Vector operator()(double h,double a,double b) const {
- // {a,b}/{h,h} is probably slower
- Vector r = { a/h, b/h };
- return r;
- }
- };
- };
-
- typedef double const* Vector_const_iterator;
- static inline Vector_const_iterator vector_begin(Vector const&a){
- return (Vector_const_iterator)(&a);
- }
- static inline Vector_const_iterator vector_end(Vector const&a){
- return (Vector_const_iterator)(&a)+2;
- }
- static inline unsigned size_of_vector(Vector){
- return 2;
- }
- public:
-
- static double determinant_of_vectors(Vector a, Vector b) {
- __m128d c = _mm_shuffle_pd (b, b, 1); // b1, b0
- __m128d d = a * c; // a0*b1, a1*b0
-#ifdef __SSE3__
- __m128d e = _mm_hsub_pd (d, d);
- return e[0];
-#else
- return d[0]-d[1];
-#endif
- }
- static CGAL::Sign sign_of_determinant_of_vectors(Vector a, Vector b) {
- return CGAL::sign(determinant_of_vectors(a,b));
- }
-
- static double dot_product(Vector a,Vector b){
-#ifdef __SSE4_1__
- return _mm_dp_pd (a, b, 1+16+32)[0];
-#else
- __m128d p = a * b;
-#if defined __SSE3__
- __m128d s = _mm_hadd_pd (p, p);
- return s[0];
-#else
- return p[0]+p[1];
-#endif
-#endif
- };
- };
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/v2int.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/v2int.h
deleted file mode 100644
index b85a3734..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/v2int.h
+++ /dev/null
@@ -1,181 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_2INT_H
-#define CGAL_VECTOR_2INT_H
-
-#include <stdint.h>
-#include <cmath>
-#include <CGAL/array.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/enum.h>
-#include <CGAL/number_utils.h>
-#include <CGAL/NT_converter.h>
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/determinant_of_vectors.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-
-
-// What are the pros and cons of having NT be int vs double?
-
-namespace CGAL {
- struct Vector_2_int_prop1 {
- typedef double NT; // try lying a bit
- typedef int32_t NT1; // what is really stored
- typedef int32_t NT1b; // slightly longer
- typedef int_fast64_t NT2; // longer type for computations
- typedef int_fast64_t NT2b; // slightly longer
- bool check_limits(int32_t x){return std::abs(x)<(1<<30);}
- // TODO: find nice bounds
- };
-#ifdef __SIZEOF_INT128__
- struct Vector_2_int_prop2 {
- typedef double NT;
- typedef int32_t NT1;
- typedef int_fast64_t NT1b;
- typedef int_fast64_t NT2;
- typedef __int128 NT2b;
- bool check_limits(int32_t){return true;}
- // take a template/int64_t input and still check the limits?
- };
- struct Vector_2_int_prop3 {
- typedef long double NT;
- typedef int64_t NT1;
- typedef int64_t NT1b;
- typedef __int128 NT2;
- typedef __int128 NT2b;
- enum { has_limit=true };
- bool check_limits(int32_t x){return std::abs(x)<(1L<<62);}
- // TODO: find nice bounds
- };
-#endif
-
- template<class Prop=Vector_2_int_prop1>
- struct Vector_2_int : Prop {
- using typename Prop::NT;
- using typename Prop::NT1;
- using typename Prop::NT1b;
- using typename Prop::NT2;
- using typename Prop::NT2b;
- using Prop::check_limits;
-
- typedef Dimension_tag<2> Dimension;
- typedef Dimension_tag<2> Max_dimension;
- // No Rebind_dimension, this is a building block
- template<class,bool=true> struct Property : boost::false_type {};
- //template<bool b> struct Property<Has_vector_plus_minus_tag,b>
- // : boost::true_type {};
- template<bool b> struct Property<Has_determinant_of_vectors_tag,b>
- : boost::true_type {};
- //template<bool b> struct Property<Has_determinant_of_points_tag,b>
- // : boost::true_type {};
- // Advertise somehow that the sign_of_determinant* are exact?
-
- typedef cpp0x::array<NT1,2> Vector;
- struct Construct_vector {
- struct Dimension {
- Vector operator()(unsigned d) const {
- CGAL_assertion(d==2);
- return Vector();
- }
- };
-
- // TODO (for all constructors): check that input fits in NT1...
- struct Iterator {
- template<typename Iter>
- Vector operator()(unsigned d,Iter const& f,Iter const& e) const {
- CGAL_assertion(d==2);
- NT1 x0 = *f;
- NT1 x1 = *++f;
- CGAL_assertion (++f == e);
- CGAL_assertion (check_limits(x0) && check_limits(x1));
- Vector a = { x0, x1 };
- return a;
- }
- };
-
- struct Iterator_and_last {
- template<typename Iter,typename T>
- Vector operator()(unsigned d,Iter const& f,Iter const& e,double t) const {
- CGAL_assertion(d==2);
- NT1 x = *f;
- CGAL_assertion (++f == e);
- CGAL_assertion (check_limits(x) && check_limits(t));
- Vector a = { x, t };
- return a;
- }
- };
-
- struct Values {
- Vector operator()(NT1 a,NT1 b) const {
- CGAL_assertion (check_limits(a) && check_limits(b));
- Vector r = { a, b };
- return r;
- }
- };
-
- /*
- // Maybe safer not to provide it
- struct Values_divide {
- Vector operator()(double h,double a,double b) const {
- Vector r = { a/h, b/h };
- return r;
- }
- };
- */
- };
-
- // Since we lie about NT, be consistent about it
- typedef transforming_iterator<NT_converter<NT1,NT>,NT1 const*> Vector_const_iterator;
- static inline Vector_const_iterator vector_begin(Vector const&a){
- return Vector_const_iterator(a.begin());
- }
- static inline Vector_const_iterator vector_end(Vector const&a){
- return Vector_const_iterator(a.end());
- }
- static inline unsigned size_of_vector(Vector){
- return 2;
- }
-
- // for unsigned NT1, check what changes to do.
- // return NT or NT2?
- static NT determinant_of_vectors(Vector a, Vector b) {
- return CGAL::determinant_of_vectors<NT2>(a,b);
- }
- static CGAL::Sign sign_of_determinant_of_vectors(Vector a, Vector b) {
- return CGAL::sign_of_determinant_of_vectors<NT2>(a,b);
- }
-
- static NT determinant_of_points(Vector a, Vector b, Vector c) {
- // could be faster to convert to NT directly
- NT1b a0=a[0]; NT1b a1=a[1];
- NT1b x0=b[0]-a0; NT1b x1=b[1]-a1;
- NT1b y0=c[0]-a0; NT1b y1=c[1]-a1;
- return CGAL::determinant<NT>(x0,x1,y0,y1);
- }
- static CGAL::Sign sign_of_determinant_of_points(Vector a, Vector b, Vector c) {
- NT1b a0=a[0]; NT1b a1=a[1];
- NT1b x0=b[0]-a0; NT1b x1=b[1]-a1;
- NT2b y0=c[0]-a0; NT2b y1=c[1]-a1;
- return CGAL::compare(x0*y1,x1*y0);
- }
- };
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Vector/vector.h b/include/gudhi_patches/CGAL/NewKernel_d/Vector/vector.h
deleted file mode 100644
index f9cc4e3c..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Vector/vector.h
+++ /dev/null
@@ -1,167 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_VECTOR_VECTOR_H
-#define CGAL_VECTOR_VECTOR_H
-#include <boost/type_traits/is_arithmetic.hpp>
-#include <boost/utility/enable_if.hpp>
-#include <CGAL/Dimension.h>
-#include <CGAL/NewKernel_d/utils.h>
-#include <vector>
-#include <boost/preprocessor/repetition.hpp>
-#include <boost/preprocessor/repetition/enum.hpp>
-namespace CGAL {
-
-//Derive from a class that doesn't depend on Dim, or still use Dim for checking?
-template<class NT_,class Dim_,class Max_dim_=Dim_> struct Vector_vector {
- typedef NT_ NT;
- typedef Dim_ Dimension;
- typedef Max_dim_ Max_dimension;
- typedef std::vector<NT> Vector;
- template< class D2, class D3=D2 >
- struct Rebind_dimension {
- typedef Vector_vector< NT, D2, D3 > Other;
- };
- template<class> struct Property : boost::false_type {};
-
- struct Construct_vector {
- struct Dimension {
- Vector operator()(int d) const {
- return Vector(d);
- }
- };
-
- struct Iterator {
- template<typename Iter>
- Vector operator()(int CGAL_assertion_code(d),Iter const& f,Iter const& e) const {
- CGAL_assertion(d==std::distance(f,e));
- return Vector(f,e);
- }
- };
-
- // unneeded thanks to Iterator_and_last?
-#if 0
- struct Iterator_add_one {
- template<typename Iter>
- Vector operator()(int CGAL_assertion_code(d),Iter const& f,Iter const& e) const {
- CGAL_assertion(d==std::distance(f,e)+1);
- Vector a;
- a.reserve(d+1);
- a.insert(a.end(),f,e);
- a.push_back(1);
- return a;
- }
- };
-#endif
-
- struct Iterator_and_last {
- template<typename Iter,typename T>
- Vector operator()(int d,Iter const& f,Iter const& e,CGAL_FORWARDABLE(T) t) const {
- CGAL_assertion(d==std::distance(f,e)+1);
- Vector a;
- a.reserve(d+1);
- a.insert(a.end(),f,e);
- a.push_back(CGAL_FORWARD(T,t));
- return a;
- }
- };
-
- // useless, use a transform_iterator?
-#if 0
- struct Iterator_and_last_divide {
- template<typename Iter,typename T>
- Vector operator()(int d,Iter f,Iter const& e,T const&t) const {
- CGAL_assertion(d==std::distance(f,e)+1);
- Vector a;
- a.reserve(d+1);
- for(;f!=e;++f){
- a.push_back(*f/t);
- }
- return a;
- }
- };
-#endif
-
- struct Values {
-#ifdef CGAL_CXX11
- template<class...U>
- Vector operator()(U&&...u) const {
- //TODO: check the right number of {}, g++ accepts one and two
- Vector a={forward_safe<NT,U>(u)...};
- return a;
- }
-#else
-
-#define CGAL_VAR(Z,N,_) a.push_back(t##N);
-#define CGAL_CODE(Z,N,_) Vector operator()(BOOST_PP_ENUM_PARAMS(N,NT const& t)) const { \
- Vector a; \
- a.reserve(N); \
- BOOST_PP_REPEAT(N,CGAL_VAR,) \
- return a; \
-}
-BOOST_PP_REPEAT_FROM_TO(1, 11, CGAL_CODE, _ )
-#undef CGAL_CODE
-#undef CGAL_VAR
-
-#endif
- };
-
- struct Values_divide {
-#ifdef CGAL_CXX11
- template<class H,class...U>
- Vector operator()(H const&h,U&&...u) const {
- //TODO: do we want to cast at some point?
- //e.g. to avoid 1/2 in integers
- // ==> use Rational_traits<NT>().make_rational(x,y) ?
- Vector a={Rational_traits<NT>().make_rational(std::forward<U>(u),h)...};
- return a;
- }
-#else
-
-#define CGAL_VAR(Z,N,_) a.push_back(Rational_traits<NT>().make_rational( t##N ,h));
-#define CGAL_CODE(Z,N,_) template<class H> Vector \
- operator()(H const&h, BOOST_PP_ENUM_PARAMS(N,NT const& t)) const { \
- Vector a; \
- a.reserve(N); \
- BOOST_PP_REPEAT(N,CGAL_VAR,) \
- return a; \
- }
- BOOST_PP_REPEAT_FROM_TO(1, 11, CGAL_CODE, _ )
-#undef CGAL_CODE
-#undef CGAL_VAR
-
-#endif
- };
- };
- typedef typename Vector::const_iterator Vector_const_iterator;
- static Vector_const_iterator vector_begin(Vector const&a){
- return a.begin();
- }
- static Vector_const_iterator vector_end(Vector const&a){
- return a.end();
- }
- static int size_of_vector(Vector const&a){
- return (int)a.size();
- }
-};
-
-
-}
-#endif
-
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Cartesian_wrap.h b/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Cartesian_wrap.h
deleted file mode 100644
index 44e9aa96..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Cartesian_wrap.h
+++ /dev/null
@@ -1,305 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_CARTESIAN_WRAP_H
-#define CGAL_KERNEL_D_CARTESIAN_WRAP_H
-
-#include <CGAL/basic.h>
-#include <CGAL/is_iterator.h>
-
-#if defined(BOOST_MSVC)
-# pragma warning(push)
-# pragma warning(disable:4003) // not enough actual parameters for macro 'BOOST_PP_EXPAND_I'
- // http://lists.boost.org/boost-users/2014/11/83291.php
-#endif
-#include <CGAL/NewKernel_d/Wrapper/Point_d.h>
-#include <CGAL/NewKernel_d/Wrapper/Vector_d.h>
-#include <CGAL/NewKernel_d/Wrapper/Segment_d.h>
-#include <CGAL/NewKernel_d/Wrapper/Sphere_d.h>
-#include <CGAL/NewKernel_d/Wrapper/Hyperplane_d.h>
-#include <CGAL/NewKernel_d/Wrapper/Weighted_point_d.h>
-
-#include <CGAL/NewKernel_d/Wrapper/Ref_count_obj.h>
-
-#include <boost/mpl/or.hpp>
-#include <boost/mpl/contains.hpp>
-#include <boost/mpl/vector.hpp>
-
-//TODO: do we want to store the kernel ref in the Object wrappers? It would allow for additions and operator[] and things like that to work, but objects would still need to be created by functors.
-
-namespace CGAL {
-namespace internal {
-BOOST_MPL_HAS_XXX_TRAIT_DEF(Is_wrapper)
-template<class T,bool=has_Is_wrapper<T>::value> struct Is_wrapper {
- enum { value=false };
- typedef Tag_false type;
-};
-template<class T> struct Is_wrapper<T,true> {
- typedef typename T::Is_wrapper type;
- enum { value=type::value };
-};
-
-template<class T,bool=is_iterator_type<T,std::input_iterator_tag>::value> struct Is_wrapper_iterator {
- enum { value=false };
- typedef Tag_false type;
-};
-template<class T> struct Is_wrapper_iterator<T,true> :
- Is_wrapper<typename std::iterator_traits<typename CGAL::decay<T>::type>::value_type>
-{ };
-
-struct Forward_rep {
-//TODO: make a good C++0X version with perfect forwarding
-//#ifdef CGAL_CXX11
-//template <class T,class=typename std::enable_if<!Is_wrapper<typename std::decay<T>::type>::value&&!Is_wrapper_iterator<typename std::decay<T>::type>::value>::type>
-//T&& operator()(typename std::remove_reference<T>::type&& t) const {return static_cast<T&&>(t);};
-//template <class T,class=typename std::enable_if<!Is_wrapper<typename std::decay<T>::type>::value&&!Is_wrapper_iterator<typename std::decay<T>::type>::value>::type>
-//T&& operator()(typename std::remove_reference<T>::type& t) const {return static_cast<T&&>(t);};
-//
-//template <class T,class=typename std::enable_if<Is_wrapper<typename std::decay<T>::type>::value>::type>
-//typename Type_copy_cvref<T,typename std::decay<T>::type::Rep>::type&&
-//operator()(T&& t) const {
-// return static_cast<typename Type_copy_cvref<T,typename std::decay<T>::type::Rep>::type&&>(t.rep());
-//};
-//
-//template <class T,class=typename std::enable_if<Is_wrapper_iterator<typename std::decay<T>::type>::value>::type>
-//transforming_iterator<Forward_rep,typename std::decay<T>::type>
-//operator()(T&& t) const {
-// return make_transforming_iterator(std::forward<T>(t),Forward_rep());
-//};
-//#else
-template <class T,bool=Is_wrapper<T>::value,bool=Is_wrapper_iterator<T>::value> struct result_;
-template <class T> struct result_<T,false,false>{typedef T const& type;};
-template <class T> struct result_<T,true,false>{typedef typename decay<T>::type::Rep const& type;};
-template <class T> struct result_<T,false,true>{typedef transforming_iterator<Forward_rep,typename decay<T>::type> type;};
-template<class> struct result;
-template<class T> struct result<Forward_rep(T)> : result_<T> {};
-
-template <class T> typename boost::disable_if<boost::mpl::or_<Is_wrapper<T>,Is_wrapper_iterator<T> >,T>::type const& operator()(T const& t) const {return t;}
-template <class T> typename boost::disable_if<boost::mpl::or_<Is_wrapper<T>,Is_wrapper_iterator<T> >,T>::type& operator()(T& t) const {return t;}
-
-template <class T> typename T::Rep const& operator()(T const& t, typename boost::enable_if<Is_wrapper<T> >::type* = 0) const {return t.rep();}
-
-template <class T> transforming_iterator<Forward_rep,typename boost::enable_if<Is_wrapper_iterator<T>,T>::type> operator()(T const& t) const {return make_transforming_iterator(t,Forward_rep());}
-//#endif
-};
-}
-
-template <class B, class K, class T, bool = Provides_type<B, T>::value>
-struct Map_wrapping_type : Get_type<B, T> {};
-#define CGAL_REGISTER_OBJECT_WRAPPER(X) \
- template <class B, class K> \
- struct Map_wrapping_type <B, K, X##_tag, true> { \
- typedef Wrap::X##_d<K> type; \
- }
-CGAL_REGISTER_OBJECT_WRAPPER(Point);
-CGAL_REGISTER_OBJECT_WRAPPER(Vector);
-CGAL_REGISTER_OBJECT_WRAPPER(Segment);
-CGAL_REGISTER_OBJECT_WRAPPER(Sphere);
-CGAL_REGISTER_OBJECT_WRAPPER(Hyperplane);
-CGAL_REGISTER_OBJECT_WRAPPER(Weighted_point);
-#undef CGAL_REGISTER_OBJECT_WRAPPER
-
-// Note: this tends to be an all or nothing thing currently, wrapping
-// only some types breaks, probably because we don't check whether the
-// return type is indeed wrapped.
-template < typename Base_ , typename Derived_ = Default >
-struct Cartesian_wrap : public Base_
-{
- CGAL_CONSTEXPR Cartesian_wrap(){}
- CGAL_CONSTEXPR Cartesian_wrap(int d):Base_(d){}
- typedef Base_ Kernel_base;
- typedef Cartesian_wrap Self;
- // TODO: pass the 2 types Self and Derived to the wrappers, they can use Self for most purposes and Derived only for Kernel_traits' typedef R.
- typedef typename Default::Get<Derived_, Self>::type Derived;
- // FIXME: The list doesn't belong here.
- typedef boost::mpl::vector<Point_tag,Segment_tag,Sphere_tag,Vector_tag,Hyperplane_tag> Wrapped_list;
-
- template <class T>
- struct Type : Map_wrapping_type<Base_, Derived, T> {};
-
- //Translate the arguments
- template <class T, class D = void,
- class=typename Get_functor_category<Derived,T>::type,
- bool=Provides_functor<Kernel_base, T>::value,
- bool=boost::mpl::contains<Wrapped_list,typename map_result_tag<T>::type>::type::value>
- struct Functor {
- typedef typename Get_functor<Kernel_base, T>::type B;
- struct type {
- B b;
- type(){}
- type(Self const&k):b(k){}
- typedef typename B::result_type result_type;
-#ifdef CGAL_CXX11
- template<class...U> result_type operator()(U&&...u)const{
- return b(internal::Forward_rep()(u)...);
- }
-#else
-#define CGAL_VAR(Z,N,_) internal::Forward_rep()(u##N)
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class U)> result_type \
- operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,U,const&u))const{ \
- return b(BOOST_PP_ENUM(N,CGAL_VAR,)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-#undef CGAL_VAR
-// In case the last argument needs to be non-const. Fragile...
-#define CGAL_VAR(Z,N,_) internal::Forward_rep()(u##N)
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class U),class V> result_type \
- operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,U,const&u),V&v)const{ \
- return b(BOOST_PP_ENUM(N,CGAL_VAR,),internal::Forward_rep()(v)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1,8,CGAL_CODE,_)
-#undef CGAL_CODE
-#undef CGAL_VAR
-#endif
- };
- };
-
- // Preserve the difference between Null_functor and nothing.
- template <class T, class D, class C, bool b>
- struct Functor <T, D, C, false, b>
- : Get_functor <Kernel_base, T> {};
-
- //Translate both the arguments and the result
- //TODO: Check Is_wrapper instead of relying on map_result_tag?
- template<class T,class D> struct Functor<T,D,Construct_tag,true,true> {
- typedef typename Get_functor<Kernel_base, T>::type B;
- struct type {
- B b;
- type(){}
- type(Self const&k):b(k){}
- typedef typename map_result_tag<T>::type result_tag;
- // FIXME: Self or Derived?
- typedef typename Get_type<Self,result_tag>::type result_type;
-#ifdef CGAL_CXX11
- template<class...U> result_type operator()(U&&...u)const{
- return result_type(Eval_functor(),b,internal::Forward_rep()(u)...);
- }
-#else
-#define CGAL_VAR(Z,N,_) internal::Forward_rep()(u##N)
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class U)> result_type \
- operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,U,const&u))const{ \
- return result_type(Eval_functor(),b,BOOST_PP_ENUM(N,CGAL_VAR,)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-#undef CGAL_VAR
-#endif
- };
- };
-
-};
-
-template < typename Base_ >
-struct Cartesian_refcount : public Base_
-{
- CGAL_CONSTEXPR Cartesian_refcount(){}
- CGAL_CONSTEXPR Cartesian_refcount(int d):Base_(d){}
- typedef Base_ Kernel_base;
- typedef Cartesian_refcount Self;
-
- // FIXME: Use object_list, or a list passed as argument, or anything
- // automatic.
- template <class T, class=void> struct Type : Get_type<Base_, T> {};
-#define CGAL_Kernel_obj(X,Y) \
- template <class D> struct Type<X##_tag, D> { typedef Ref_count_obj<Cartesian_refcount, X##_tag> type; };
-
- CGAL_Kernel_obj(Point,point)
- CGAL_Kernel_obj(Vector,vector)
-#undef CGAL_Kernel_obj
-
- template<class T> struct Dispatch {
- //typedef typename map_functor_type<T>::type f_t;
- typedef typename map_result_tag<T>::type r_t;
- enum {
- is_nul = boost::is_same<typename Get_functor<Kernel_base, T>::type,Null_functor>::value,
- ret_rcobj = boost::is_same<r_t,Point_tag>::value || boost::is_same<r_t,Vector_tag>::value
- };
- };
-
- //Translate the arguments
- template<class T,class D=void,bool=Dispatch<T>::is_nul,bool=Dispatch<T>::ret_rcobj> struct Functor {
- typedef typename Get_functor<Kernel_base, T>::type B;
- struct type {
- B b;
- type(){}
- type(Self const&k):b(k){}
- typedef typename B::result_type result_type;
-#ifdef CGAL_CXX11
- template<class...U> result_type operator()(U&&...u)const{
- return b(internal::Forward_rep()(u)...);
- }
-#else
- result_type operator()()const{
- return b();
- }
-#define CGAL_VAR(Z,N,_) internal::Forward_rep()(u##N)
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class U)> result_type \
- operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,U,const&u))const{ \
- return b(BOOST_PP_ENUM(N,CGAL_VAR,)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-#undef CGAL_VAR
-#endif
- };
- };
-
- //Translate both the arguments and the result
- template<class T,class D,bool b> struct Functor<T,D,true,b> {
- typedef Null_functor type;
- };
-
- template<class T,class D> struct Functor<T,D,false,true> {
- typedef typename Get_functor<Kernel_base, T>::type B;
- struct type {
- B b;
- type(){}
- type(Self const&k):b(k){}
- typedef typename map_result_tag<T>::type result_tag;
- typedef typename Get_type<Self,result_tag>::type result_type;
-#ifdef CGAL_CXX11
- template<class...U> result_type operator()(U&&...u)const{
- return result_type(Eval_functor(),b,internal::Forward_rep()(u)...);
- }
-#else
- result_type operator()()const{
- return result_type(Eval_functor(),b);
- }
-#define CGAL_VAR(Z,N,_) internal::Forward_rep()(u##N)
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class U)> result_type \
- operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,U,const&u))const{ \
- return result_type(Eval_functor(),b,BOOST_PP_ENUM(N,CGAL_VAR,)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-#undef CGAL_VAR
-#endif
- };
- };
-
-};
-
-} //namespace CGAL
-
-#if defined(BOOST_MSVC)
-# pragma warning(pop)
-#endif
-
-#endif // CGAL_KERNEL_D_CARTESIAN_WRAP_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Hyperplane_d.h b/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Hyperplane_d.h
deleted file mode 100644
index 54fd50bd..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Hyperplane_d.h
+++ /dev/null
@@ -1,131 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_WRAPPER_HYPERPLANE_D_H
-#define CGAL_WRAPPER_HYPERPLANE_D_H
-
-#include <CGAL/representation_tags.h>
-#include <CGAL/assertions.h>
-#include <boost/type_traits.hpp>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/Dimension.h>
-#ifndef CGAL_CXX11
-#include <boost/preprocessor/repetition.hpp>
-#endif
-#include <boost/utility/result_of.hpp>
-
-namespace CGAL {
-namespace Wrap {
-
-template <class R_>
-class Hyperplane_d : public Get_type<typename R_::Kernel_base, Hyperplane_tag>::type
-{
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename R_::Kernel_base Kbase;
- typedef typename Get_type<R_, Vector_tag>::type Vector_;
- typedef typename Get_functor<Kbase, Construct_ttag<Hyperplane_tag> >::type CHBase;
- typedef typename Get_functor<Kbase, Orthogonal_vector_tag>::type OVBase;
- typedef typename Get_functor<Kbase, Hyperplane_translation_tag>::type HTBase;
-
- typedef Hyperplane_d Self;
- CGAL_static_assertion((boost::is_same<Self, typename Get_type<R_, Hyperplane_tag>::type>::value));
-
-public:
-
- typedef Tag_true Is_wrapper;
- typedef typename R_::Default_ambient_dimension Ambient_dimension;
- typedef typename Increment_dimension<Ambient_dimension,-1>::type Feature_dimension;
-
- typedef typename Get_type<Kbase, Hyperplane_tag>::type Rep;
-
- const Rep& rep() const
- {
- return *this;
- }
-
- Rep& rep()
- {
- return *this;
- }
-
- typedef R_ R;
-
-#ifdef CGAL_CXX11
- template<class...U,class=typename std::enable_if<!std::is_same<std::tuple<typename std::decay<U>::type...>,std::tuple<Hyperplane_d> >::value>::type> explicit Hyperplane_d(U&&...u)
- : Rep(CHBase()(std::forward<U>(u)...)){}
-
-// // called from Construct_point_d
-// template<class...U> explicit Point_d(Eval_functor&&,U&&...u)
-// : Rep(Eval_functor(), std::forward<U>(u)...){}
- template<class F,class...U> explicit Hyperplane_d(Eval_functor&&,F&&f,U&&...u)
- : Rep(std::forward<F>(f)(std::forward<U>(u)...)){}
-
-#if 0
- // the new standard may make this necessary
- Point_d(Point_d const&)=default;
- Point_d(Point_d &);//=default;
- Point_d(Point_d &&)=default;
-#endif
-
- // try not to use these
- Hyperplane_d(Rep const& v) : Rep(v) {}
- Hyperplane_d(Rep& v) : Rep(static_cast<Rep const&>(v)) {}
- Hyperplane_d(Rep&& v) : Rep(std::move(v)) {}
-
-#else
-
- Hyperplane_d() : Rep(CHBase()()) {}
-
- Hyperplane_d(Rep const& v) : Rep(v) {} // try not to use it
-
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- explicit Hyperplane_d(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(CHBase()( \
- BOOST_PP_ENUM_PARAMS(N,t))) {} \
- \
- template<class F,BOOST_PP_ENUM_PARAMS(N,class T)> \
- Hyperplane_d(Eval_functor,F const& f,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(f(BOOST_PP_ENUM_PARAMS(N,t))) {}
- /*
- template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- Point_d(Eval_functor,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(Eval_functor(), BOOST_PP_ENUM_PARAMS(N,t)) {}
- */
-
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-
-#endif
-
- //TODO: if OVBase returns a reference to a base vector, cast it to a
- //reference to a wrapper vector. Ugly but should be safe.
- Vector_ orthogonal_vector()const{
- return Vector_(Eval_functor(),OVBase(),rep());
- }
- FT_ translation()const{
- return HTBase()(rep());
- }
-
-
-};
-
-} //namespace Wrap
-} //namespace CGAL
-
-#endif // CGAL_WRAPPER_SPHERE_D_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Point_d.h b/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Point_d.h
deleted file mode 100644
index 0718c947..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Point_d.h
+++ /dev/null
@@ -1,284 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_WRAPPER_POINT_D_H
-#define CGAL_WRAPPER_POINT_D_H
-
-#include <ostream>
-#include <CGAL/Origin.h>
-#include <CGAL/Kernel/mpl.h>
-#include <CGAL/representation_tags.h>
-#include <CGAL/assertions.h>
-#include <boost/type_traits.hpp>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/Dimension.h>
-#ifndef CGAL_CXX11
-#include <boost/preprocessor/repetition.hpp>
-#endif
-#include <boost/utility/result_of.hpp>
-
-namespace CGAL {
-namespace Wrap {
-
-template <class R_>
-class Point_d : public Get_type<typename R_::Kernel_base, Point_tag>::type
- // Deriving won't work if the point is just a __m256d.
- // Test boost/std::is_class for instance
-{
- typedef typename Get_type<R_, RT_tag>::type RT_;
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename R_::Kernel_base Kbase;
- typedef typename Get_type<R_, Vector_tag>::type Vector_;
- typedef typename Get_functor<Kbase, Construct_ttag<Point_tag> >::type CPBase;
- typedef typename Get_functor<Kbase, Compute_point_cartesian_coordinate_tag>::type CCBase;
- typedef typename Get_functor<Kbase, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CPI;
-
-
- typedef Point_d Self;
- CGAL_static_assertion((boost::is_same<Self, typename Get_type<R_, Point_tag>::type>::value));
-
-public:
-
- typedef Tag_true Is_wrapper;
- typedef typename R_::Default_ambient_dimension Ambient_dimension;
- typedef Dimension_tag<0> Feature_dimension;
-
- typedef typename Get_type<Kbase, Point_tag>::type Rep;
- //typedef typename CGAL::decay<typename boost::result_of<CPI(Rep,Begin_tag)>::type>::type Cartesian_const_iterator;
-
- const Rep& rep() const
- {
- return *this;
- }
-
- Rep& rep()
- {
- return *this;
- }
-
- typedef R_ R;
-
-#ifdef CGAL_CXX11
- template<class...U,class=typename std::enable_if<!std::is_same<std::tuple<typename std::decay<U>::type...>,std::tuple<Point_d> >::value>::type> explicit Point_d(U&&...u)
- : Rep(CPBase()(std::forward<U>(u)...)){}
-
-// // called from Construct_point_d
-// template<class...U> explicit Point_d(Eval_functor&&,U&&...u)
-// : Rep(Eval_functor(), std::forward<U>(u)...){}
- template<class F,class...U> explicit Point_d(Eval_functor&&,F&&f,U&&...u)
- : Rep(std::forward<F>(f)(std::forward<U>(u)...)){}
-
-#if 0
- // the new standard may make this necessary
- Point_d(Point_d const&)=default;
- Point_d(Point_d &);//=default;
- Point_d(Point_d &&)=default;
-#endif
-
- // try not to use these
- Point_d(Rep const& v) : Rep(v) {}
- Point_d(Rep& v) : Rep(static_cast<Rep const&>(v)) {}
- Point_d(Rep&& v) : Rep(std::move(v)) {}
-
- // this one should be implicit
- Point_d(Origin const& v)
- : Rep(CPBase()(v)) {}
- Point_d(Origin& v)
- : Rep(CPBase()(v)) {}
- Point_d(Origin&& v)
- : Rep(CPBase()(std::move(v))) {}
-
-#else
-
- Point_d() : Rep(CPBase()()) {}
-
- Point_d(Rep const& v) : Rep(v) {} // try not to use it
-
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- explicit Point_d(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(CPBase()( \
- BOOST_PP_ENUM_PARAMS(N,t))) {} \
- \
- template<class F,BOOST_PP_ENUM_PARAMS(N,class T)> \
- Point_d(Eval_functor,F const& f,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(f(BOOST_PP_ENUM_PARAMS(N,t))) {}
- /*
- template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- Point_d(Eval_functor,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(Eval_functor(), BOOST_PP_ENUM_PARAMS(N,t)) {}
- */
-
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-
- // this one should be implicit
- Point_d(Origin const& o)
- : Rep(CPBase()(o)) {}
-
-#endif
-
- typename boost::result_of<CCBase(Rep,int)>::type cartesian(int i)const{
- return CCBase()(rep(),i);
- }
- typename boost::result_of<CCBase(Rep,int)>::type operator[](int i)const{
- return CCBase()(rep(),i);
- }
-
- typename boost::result_of<CPI(Rep,Begin_tag)>::type cartesian_begin()const{
- return CPI()(rep(),Begin_tag());
- }
-
- typename boost::result_of<CPI(Rep,End_tag)>::type cartesian_end()const{
- return CPI()(rep(),End_tag());
- }
-
- int dimension() const {
- typedef typename Get_functor<Kbase, Point_dimension_tag>::type PDBase;
- return PDBase()(rep());
- }
-
- /*
- Direction_d direction() const
- {
- return R().construct_direction_d_object()(*this);
- }
-
- Vector_d transform(const Aff_transformation_d &t) const
- {
- return t.transform(*this);
- }
-
- Vector_d operator/(const RT& c) const
- {
- return R().construct_divided_vector_d_object()(*this,c);
- }
-
- Vector_d operator/(const typename First_if_different<FT_,RT>::Type & c) const
- {
- return R().construct_divided_vector_d_object()(*this,c);
- }
-
- typename Qualified_result_of<typename R::Compute_x_3, Vector_3>::type
- x() const
- {
- return R().compute_x_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_y_3, Vector_3>::type
- y() const
- {
- return R().compute_y_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_z_3, Vector_3>::type
- z() const
- {
- return R().compute_z_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_hx_3, Vector_3>::type
- hx() const
- {
- return R().compute_hx_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_hy_3, Vector_3>::type
- hy() const
- {
- return R().compute_hy_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_hz_3, Vector_3>::type
- hz() const
- {
- return R().compute_hz_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_hw_3, Vector_3>::type
- hw() const
- {
- return R().compute_hw_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_x_3, Vector_3>::type
- cartesian(int i) const
- {
- CGAL_kernel_precondition( (i == 0) || (i == 1) || (i == 2) );
- if (i==0) return x();
- if (i==1) return y();
- return z();
- }
-
- typename Qualified_result_of<typename R::Compute_hw_3, Vector_3>::type
- homogeneous(int i) const
- {
- CGAL_kernel_precondition( (i >= 0) || (i <= 3) );
- if (i==0) return hx();
- if (i==1) return hy();
- if (i==2) return hz();
- return hw();
- }
-
- typename Qualified_result_of<typename R::Compute_squared_length_3, Vector_3>::type
- squared_length() const
- {
- return R().compute_squared_length_3_object()(*this);
- }
-*/
-};
-#if 0
-template <class R_> Point_d<R_>::Point_d(Point_d &)=default;
-#endif
-
-//TODO: IO
-
-template <class R_>
-std::ostream& operator <<(std::ostream& os, const Point_d<R_>& p)
-{
- typedef typename R_::Kernel_base Kbase;
- typedef typename Get_functor<Kbase, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CPI;
- // Should just be "auto"...
- typename CGAL::decay<typename boost::result_of<
- CPI(typename Point_d<R_>::Rep,Begin_tag)
- >::type>::type
- b = p.cartesian_begin(),
- e = p.cartesian_end();
- os << p.dimension();
- for(; b != e; ++b){
- os << " " << *b;
- }
- return os;
-}
-
-//template <class R_>
-//Vector_d<R_> operator+(const Vector_d<R_>& v,const Vector_d<R_>& w) const
-//{
-// return typename R::template Construct<Sum_of_vectors_tag>::type()(v,w);
-//}
-//
-//template <class R_>
-//Vector_d<R_> operator-(const Vector_d<R_>& v,const Vector_d<R_>& w) const
-//{
-// return typename R::template Construct<Difference_of_vectors_tag>::type()(v,w);
-//}
-
-} //namespace Wrap
-} //namespace CGAL
-
-#endif // CGAL_WRAPPER_POINT_D_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Ref_count_obj.h b/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Ref_count_obj.h
deleted file mode 100644
index f33e14c0..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Ref_count_obj.h
+++ /dev/null
@@ -1,120 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_WRAPPER_REF_COUNT_OBJ_H
-#define CGAL_WRAPPER_REF_COUNT_OBJ_H
-
-#include <CGAL/Origin.h>
-#include <CGAL/Handle_for.h>
-#include <CGAL/Kernel/mpl.h>
-#include <CGAL/representation_tags.h>
-#include <CGAL/assertions.h>
-#include <boost/type_traits.hpp>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/Dimension.h>
-#ifndef CGAL_CXX11
-#include <boost/preprocessor/repetition.hpp>
-#endif
-#include <boost/utility/result_of.hpp>
-
-// no need for a fancy interface here, people can use the Point_d wrapper on
-// top.
-
-namespace CGAL {
-
-template <class R_, class Tag_>
-class Ref_count_obj
-{
- typedef typename R_::Kernel_base Kbase;
- typedef typename Get_functor<Kbase, Construct_ttag<Tag_> >::type CBase;
-
- typedef Ref_count_obj Self;
- CGAL_static_assertion((boost::is_same<Self, typename Get_type<R_, Tag_>::type>::value));
-
-public:
- typedef R_ R;
-
- typedef Tag_true Is_wrapper;
- typedef typename R_::Default_ambient_dimension Ambient_dimension;
- //typedef Dimension_tag<0> Feature_dimension;
-
- typedef typename Get_type<Kbase, Tag_>::type Rep;
- typedef Handle_for<Rep> Data;
-
-private:
- Data data;
-public:
-
- const Rep& rep() const
- {
- return CGAL::get_pointee_or_identity(data);
- }
-
-#ifdef CGAL_CXX11
- template<class...U,class=typename std::enable_if<!std::is_same<std::tuple<typename std::decay<U>::type...>,std::tuple<Ref_count_obj> >::value>::type> explicit Ref_count_obj(U&&...u)
- : data(Eval_functor(),CBase(),std::forward<U>(u)...){}
-
- template<class F,class...U> explicit Ref_count_obj(Eval_functor&&,F&&f,U&&...u)
- : data(Eval_functor(),std::forward<F>(f),std::forward<U>(u)...){}
-
- // try not to use these
- Ref_count_obj(Rep const& v) : data(v) {}
- Ref_count_obj(Rep& v) : data(static_cast<Rep const&>(v)) {}
- Ref_count_obj(Rep&& v) : data(std::move(v)) {}
-
- // Do we really need this for point?
-// // this one should be implicit
-// Ref_count_obj(Origin const& v)
-// : data(Eval_functor(),CBase(),v) {}
-// Ref_count_obj(Origin& v)
-// : data(Eval_functor(),CBase(),v) {}
-// Ref_count_obj(Origin&& v)
-// : data(Eval_functor(),CBase(),std::move(v)) {}
-
-#else
-
- Ref_count_obj() : data(Eval_functor(),CBase()) {}
-
- Ref_count_obj(Rep const& v) : data(v) {} // try not to use it
-
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- explicit Ref_count_obj(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : data(Eval_functor(),CBase(),BOOST_PP_ENUM_PARAMS(N,t)) {} \
- \
- template<class F,BOOST_PP_ENUM_PARAMS(N,class T)> \
- Ref_count_obj(Eval_functor,F const& f,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : data(Eval_functor(),f,BOOST_PP_ENUM_PARAMS(N,t)) {}
-
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
- template<class F>
- Ref_count_obj(Eval_functor,F const& f)
- : data(Eval_functor(),f) {}
-
-// // this one should be implicit
-// Ref_count_obj(Origin const& o)
-// : data(Eval_functor(),CBase(),o) {}
-
-#endif
-
-};
-
-} //namespace CGAL
-
-#endif
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Segment_d.h b/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Segment_d.h
deleted file mode 100644
index bfb20a77..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Segment_d.h
+++ /dev/null
@@ -1,133 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_WRAPPER_SEGMENT_D_H
-#define CGAL_WRAPPER_SEGMENT_D_H
-
-#include <CGAL/Origin.h>
-#include <CGAL/Kernel/mpl.h>
-#include <CGAL/representation_tags.h>
-#include <CGAL/assertions.h>
-#include <boost/type_traits.hpp>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/Dimension.h>
-#ifndef CGAL_CXX11
-#include <boost/preprocessor/repetition.hpp>
-#endif
-#include <boost/utility/result_of.hpp>
-
-namespace CGAL {
-namespace Wrap {
-
-template <class R_>
-class Segment_d : public Get_type<typename R_::Kernel_base, Segment_tag>::type
-{
- typedef typename Get_type<R_, RT_tag>::type RT_;
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename R_::Kernel_base Kbase;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- typedef typename Get_functor<Kbase, Construct_ttag<Point_tag> >::type CPBase;
- typedef typename Get_functor<Kbase, Construct_ttag<Segment_tag> >::type CSBase;
- typedef typename Get_functor<Kbase, Segment_extremity_tag>::type CSEBase;
-
- typedef Segment_d Self;
- CGAL_static_assertion((boost::is_same<Self, typename Get_type<R_, Segment_tag>::type>::value));
-
-public:
-
- typedef Tag_true Is_wrapper;
- typedef typename R_::Default_ambient_dimension Ambient_dimension;
- typedef Dimension_tag<1> Feature_dimension;
-
- typedef typename Get_type<Kbase, Segment_tag>::type Rep;
-
- const Rep& rep() const
- {
- return *this;
- }
-
- Rep& rep()
- {
- return *this;
- }
-
- typedef R_ R;
-
-#ifdef CGAL_CXX11
- template<class...U,class=typename std::enable_if<!std::is_same<std::tuple<typename std::decay<U>::type...>,std::tuple<Segment_d> >::value>::type> explicit Segment_d(U&&...u)
- : Rep(CSBase()(std::forward<U>(u)...)){}
-
-// // called from Construct_point_d
-// template<class...U> explicit Point_d(Eval_functor&&,U&&...u)
-// : Rep(Eval_functor(), std::forward<U>(u)...){}
- template<class F,class...U> explicit Segment_d(Eval_functor&&,F&&f,U&&...u)
- : Rep(std::forward<F>(f)(std::forward<U>(u)...)){}
-
-#if 0
- // the new standard may make this necessary
- Point_d(Point_d const&)=default;
- Point_d(Point_d &);//=default;
- Point_d(Point_d &&)=default;
-#endif
-
- // try not to use these
- Segment_d(Rep const& v) : Rep(v) {}
- Segment_d(Rep& v) : Rep(static_cast<Rep const&>(v)) {}
- Segment_d(Rep&& v) : Rep(std::move(v)) {}
-
-#else
-
- Segment_d() : Rep(CSBase()()) {}
-
- Segment_d(Rep const& v) : Rep(v) {} // try not to use it
-
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- explicit Segment_d(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(CSBase()( \
- BOOST_PP_ENUM_PARAMS(N,t))) {} \
- \
- template<class F,BOOST_PP_ENUM_PARAMS(N,class T)> \
- Segment_d(Eval_functor,F const& f,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(f(BOOST_PP_ENUM_PARAMS(N,t))) {}
- /*
- template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- Point_d(Eval_functor,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(Eval_functor(), BOOST_PP_ENUM_PARAMS(N,t)) {}
- */
-
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-
-#endif
-
- //TODO: if CSEBase returns a reference to a base point, cast it to a
- //reference to a wrapper point. Ugly but should be safe.
- Point_ source()const{
- return Point_(Eval_functor(),CSEBase(),rep(),0);
- }
- Point_ target()const{
- return Point_(Eval_functor(),CSEBase(),rep(),1);
- }
-
-};
-
-} //namespace Wrap
-} //namespace CGAL
-
-#endif // CGAL_WRAPPER_SEGMENT_D_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Sphere_d.h b/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Sphere_d.h
deleted file mode 100644
index 87f0c66e..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Sphere_d.h
+++ /dev/null
@@ -1,130 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_WRAPPER_SPHERE_D_H
-#define CGAL_WRAPPER_SPHERE_D_H
-
-#include <CGAL/representation_tags.h>
-#include <CGAL/assertions.h>
-#include <boost/type_traits.hpp>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/Dimension.h>
-#ifndef CGAL_CXX11
-#include <boost/preprocessor/repetition.hpp>
-#endif
-#include <boost/utility/result_of.hpp>
-
-namespace CGAL {
-namespace Wrap {
-
-template <class R_>
-class Sphere_d : public Get_type<typename R_::Kernel_base, Sphere_tag>::type
-{
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename R_::Kernel_base Kbase;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- typedef typename Get_functor<Kbase, Construct_ttag<Sphere_tag> >::type CSBase;
- typedef typename Get_functor<Kbase, Center_of_sphere_tag>::type COSBase;
- typedef typename Get_functor<Kbase, Squared_radius_tag>::type SRBase;
-
- typedef Sphere_d Self;
- CGAL_static_assertion((boost::is_same<Self, typename Get_type<R_, Sphere_tag>::type>::value));
-
-public:
-
- typedef Tag_true Is_wrapper;
- typedef typename R_::Default_ambient_dimension Ambient_dimension;
- typedef typename Increment_dimension<Ambient_dimension,-1>::type Feature_dimension;
-
- typedef typename Get_type<Kbase, Sphere_tag>::type Rep;
-
- const Rep& rep() const
- {
- return *this;
- }
-
- Rep& rep()
- {
- return *this;
- }
-
- typedef R_ R;
-
-#ifdef CGAL_CXX11
- template<class...U,class=typename std::enable_if<!std::is_same<std::tuple<typename std::decay<U>::type...>,std::tuple<Sphere_d> >::value>::type> explicit Sphere_d(U&&...u)
- : Rep(CSBase()(std::forward<U>(u)...)){}
-
-// // called from Construct_point_d
-// template<class...U> explicit Point_d(Eval_functor&&,U&&...u)
-// : Rep(Eval_functor(), std::forward<U>(u)...){}
- template<class F,class...U> explicit Sphere_d(Eval_functor&&,F&&f,U&&...u)
- : Rep(std::forward<F>(f)(std::forward<U>(u)...)){}
-
-#if 0
- // the new standard may make this necessary
- Point_d(Point_d const&)=default;
- Point_d(Point_d &);//=default;
- Point_d(Point_d &&)=default;
-#endif
-
- // try not to use these
- Sphere_d(Rep const& v) : Rep(v) {}
- Sphere_d(Rep& v) : Rep(static_cast<Rep const&>(v)) {}
- Sphere_d(Rep&& v) : Rep(std::move(v)) {}
-
-#else
-
- Sphere_d() : Rep(CSBase()()) {}
-
- Sphere_d(Rep const& v) : Rep(v) {} // try not to use it
-
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- explicit Sphere_d(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(CSBase()( \
- BOOST_PP_ENUM_PARAMS(N,t))) {} \
- \
- template<class F,BOOST_PP_ENUM_PARAMS(N,class T)> \
- Sphere_d(Eval_functor,F const& f,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(f(BOOST_PP_ENUM_PARAMS(N,t))) {}
- /*
- template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- Point_d(Eval_functor,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(Eval_functor(), BOOST_PP_ENUM_PARAMS(N,t)) {}
- */
-
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-
-#endif
-
- //TODO: if COSBase returns a reference to a base point, cast it to a
- //reference to a wrapper point. Ugly but should be safe.
- Point_ center()const{
- return Point_(Eval_functor(),COSBase(),rep());
- }
- FT_ squared_radius()const{
- return SRBase()(rep());
- }
-
-};
-
-} //namespace Wrap
-} //namespace CGAL
-
-#endif // CGAL_WRAPPER_SPHERE_D_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Vector_d.h b/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Vector_d.h
deleted file mode 100644
index b7d1f0d0..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Vector_d.h
+++ /dev/null
@@ -1,266 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_WRAPPER_VECTOR_D_H
-#define CGAL_WRAPPER_VECTOR_D_H
-
-#include <CGAL/Origin.h>
-#include <CGAL/Kernel/mpl.h>
-#include <CGAL/representation_tags.h>
-#include <CGAL/assertions.h>
-#include <boost/type_traits.hpp>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/Dimension.h>
-#ifndef CGAL_CXX11
-#include <boost/preprocessor/repetition.hpp>
-#endif
-#include <boost/utility/result_of.hpp>
-
-namespace CGAL {
-namespace Wrap {
-
-template <class R_>
-class Vector_d : public Get_type<typename R_::Kernel_base, Vector_tag>::type
-{
- typedef typename Get_type<R_, RT_tag>::type RT_;
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename R_::Kernel_base Kbase;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- typedef typename Get_functor<Kbase, Construct_ttag<Vector_tag> >::type CVBase;
- typedef typename Get_functor<Kbase, Compute_vector_cartesian_coordinate_tag>::type CCBase;
- typedef typename Get_functor<Kbase, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CVI;
- typedef typename Get_functor<Kbase, Squared_length_tag>::type SLBase;
-
- typedef Vector_d Self;
- CGAL_static_assertion((boost::is_same<Self, typename Get_type<R_, Vector_tag>::type>::value));
-
-public:
-
- typedef Tag_true Is_wrapper;
- typedef typename R_::Default_ambient_dimension Ambient_dimension;
- typedef Dimension_tag<0> Feature_dimension;
-
- //typedef typename R_::Vector_cartesian_const_iterator Cartesian_const_iterator;
- typedef typename Get_type<Kbase, Vector_tag>::type Rep;
-
- const Rep& rep() const
- {
- return *this;
- }
-
- Rep& rep()
- {
- return *this;
- }
-
- typedef R_ R;
-
-#ifdef CGAL_CXX11
- template<class...U,class=typename std::enable_if<!std::is_same<std::tuple<typename std::decay<U>::type...>,std::tuple<Vector_d> >::value>::type> explicit Vector_d(U&&...u)
- : Rep(CVBase()(std::forward<U>(u)...)){}
-
-// // called from Construct_vector_d
-// template<class...U> explicit Vector_d(Eval_functor&&,U&&...u)
-// : Rep(Eval_functor(), std::forward<U>(u)...){}
- template<class F,class...U> explicit Vector_d(Eval_functor&&,F&&f,U&&...u)
- : Rep(std::forward<F>(f)(std::forward<U>(u)...)){}
-
-#if 0
- // the new standard may make this necessary
- Vector_d(Vector_d const&)=default;
- Vector_d(Vector_d &);//=default;
- Vector_d(Vector_d &&)=default;
-#endif
-
- // try not to use these
- Vector_d(Rep const& v) : Rep(v) {}
- Vector_d(Rep& v) : Rep(static_cast<Rep const&>(v)) {}
- Vector_d(Rep&& v) : Rep(std::move(v)) {}
-
- // this one should be implicit
- Vector_d(Null_vector const& v)
- : Rep(CVBase()(v)) {}
- Vector_d(Null_vector& v)
- : Rep(CVBase()(v)) {}
- Vector_d(Null_vector&& v)
- : Rep(CVBase()(std::move(v))) {}
-
-#else
-
- Vector_d() : Rep(CVBase()()) {}
-
- Vector_d(Rep const& v) : Rep(v) {} // try not to use it
-
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- explicit Vector_d(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(CVBase()( \
- BOOST_PP_ENUM_PARAMS(N,t))) {} \
- \
- template<class F,BOOST_PP_ENUM_PARAMS(N,class T)> \
- Vector_d(Eval_functor,F const& f,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(f(BOOST_PP_ENUM_PARAMS(N,t))) {}
- /*
- template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- Vector_d(Eval_functor,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(Eval_functor(), BOOST_PP_ENUM_PARAMS(N,t)) {}
- */
-
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-
- // this one should be implicit
- Vector_d(Null_vector const& v)
- : Rep(CVBase()(v)) {}
-
-#endif
-
- typename boost::result_of<CCBase(Rep,int)>::type cartesian(int i)const{
- return CCBase()(rep(),i);
- }
-
- typename boost::result_of<CCBase(Rep,int)>::type operator[](int i)const{
- return CCBase()(rep(),i);
- }
-
- typename boost::result_of<CVI(Rep,Begin_tag)>::type cartesian_begin()const{
- return CVI()(rep(),Begin_tag());
- }
-
- typename boost::result_of<CVI(Rep,End_tag)>::type cartesian_end()const{
- return CVI()(rep(),End_tag());
- }
-
- Vector_d operator-() const
- {
- return typename Get_functor<R, Opposite_vector_tag>::type()(*this);
- }
-
- /*
- Direction_d direction() const
- {
- return R().construct_direction_d_object()(*this);
- }
-
- Vector_d transform(const Aff_transformation_d &t) const
- {
- return t.transform(*this);
- }
-
- Vector_d operator/(const RT& c) const
- {
- return R().construct_divided_vector_d_object()(*this,c);
- }
-
- Vector_d operator/(const typename First_if_different<FT_,RT>::Type & c) const
- {
- return R().construct_divided_vector_d_object()(*this,c);
- }
-
- typename Qualified_result_of<typename R::Compute_x_3, Vector_3>::type
- x() const
- {
- return R().compute_x_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_y_3, Vector_3>::type
- y() const
- {
- return R().compute_y_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_z_3, Vector_3>::type
- z() const
- {
- return R().compute_z_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_hx_3, Vector_3>::type
- hx() const
- {
- return R().compute_hx_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_hy_3, Vector_3>::type
- hy() const
- {
- return R().compute_hy_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_hz_3, Vector_3>::type
- hz() const
- {
- return R().compute_hz_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_hw_3, Vector_3>::type
- hw() const
- {
- return R().compute_hw_3_object()(*this);
- }
-
- typename Qualified_result_of<typename R::Compute_x_3, Vector_3>::type
- cartesian(int i) const
- {
- CGAL_kernel_precondition( (i == 0) || (i == 1) || (i == 2) );
- if (i==0) return x();
- if (i==1) return y();
- return z();
- }
-
- typename Qualified_result_of<typename R::Compute_hw_3, Vector_3>::type
- homogeneous(int i) const
- {
- CGAL_kernel_precondition( (i >= 0) || (i <= 3) );
- if (i==0) return hx();
- if (i==1) return hy();
- if (i==2) return hz();
- return hw();
- }
-
- int dimension() const // bad idea?
- {
- return rep.dimension();
- }
-*/
- typename boost::result_of<SLBase(Rep)>::type squared_length()const{
- return SLBase()(rep());
- }
-};
-#if 0
-template <class R_> Vector_d<R_>::Vector_d(Vector_d &)=default;
-#endif
-
-//TODO: IO
-
-template <class R_>
-Vector_d<R_> operator+(const Vector_d<R_>& v,const Vector_d<R_>& w)
-{
- return typename Get_functor<R_, Sum_of_vectors_tag>::type()(v,w);
-}
-
-template <class R_>
-Vector_d<R_> operator-(const Vector_d<R_>& v,const Vector_d<R_>& w)
-{
- return typename Get_functor<R_, Difference_of_vectors_tag>::type()(v,w);
-}
-
-} //namespace Wrap
-} //namespace CGAL
-
-#endif // CGAL_WRAPPER_VECTOR_D_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Weighted_point_d.h b/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Weighted_point_d.h
deleted file mode 100644
index 877eea21..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/Wrapper/Weighted_point_d.h
+++ /dev/null
@@ -1,129 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_WRAPPER_WEIGHTED_POINT_D_H
-#define CGAL_WRAPPER_WEIGHTED_POINT_D_H
-
-#include <CGAL/representation_tags.h>
-#include <boost/static_assert.hpp>
-#include <boost/type_traits.hpp>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/Dimension.h>
-#ifndef CGAL_CXX11
-#include <boost/preprocessor/repetition.hpp>
-#endif
-#include <boost/utility/result_of.hpp>
-
-namespace CGAL {
-namespace Wrap {
-
-template <class R_>
-class Weighted_point_d : public Get_type<typename R_::Kernel_base, Weighted_point_tag>::type
-{
- typedef typename Get_type<R_, FT_tag>::type FT_;
- typedef typename R_::Kernel_base Kbase;
- typedef typename Get_type<R_, Point_tag>::type Point_;
- typedef typename Get_functor<Kbase, Construct_ttag<Weighted_point_tag> >::type CWPBase;
- typedef typename Get_functor<Kbase, Point_drop_weight_tag>::type PDWBase;
- typedef typename Get_functor<Kbase, Point_weight_tag>::type PWBase;
-
- typedef Weighted_point_d Self;
- BOOST_STATIC_ASSERT((boost::is_same<Self, typename Get_type<R_, Weighted_point_tag>::type>::value));
-
-public:
-
- typedef Tag_true Is_wrapper;
- typedef typename R_::Default_ambient_dimension Ambient_dimension;
- typedef Dimension_tag<0> Feature_dimension;
-
- typedef typename Get_type<Kbase, Weighted_point_tag>::type Rep;
-
- const Rep& rep() const
- {
- return *this;
- }
-
- Rep& rep()
- {
- return *this;
- }
-
- typedef R_ R;
-
-#ifdef CGAL_CXX11
- template<class...U,class=typename std::enable_if<!std::is_same<std::tuple<typename std::decay<U>::type...>,std::tuple<Weighted_point_d> >::value>::type> explicit Weighted_point_d(U&&...u)
- : Rep(CWPBase()(std::forward<U>(u)...)){}
-
-// // called from Construct_point_d
-// template<class...U> explicit Point_d(Eval_functor&&,U&&...u)
-// : Rep(Eval_functor(), std::forward<U>(u)...){}
- template<class F,class...U> explicit Weighted_point_d(Eval_functor&&,F&&f,U&&...u)
- : Rep(std::forward<F>(f)(std::forward<U>(u)...)){}
-
-#if 0
- // the new standard may make this necessary
- Point_d(Point_d const&)=default;
- Point_d(Point_d &);//=default;
- Point_d(Point_d &&)=default;
-#endif
-
- // try not to use these
- Weighted_point_d(Rep const& v) : Rep(v) {}
- Weighted_point_d(Rep& v) : Rep(static_cast<Rep const&>(v)) {}
- Weighted_point_d(Rep&& v) : Rep(std::move(v)) {}
-
-#else
-
- Weighted_point_d() : Rep(CWPBase()()) {}
-
- Weighted_point_d(Rep const& v) : Rep(v) {} // try not to use it
-
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- explicit Weighted_point_d(BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(CWPBase()( \
- BOOST_PP_ENUM_PARAMS(N,t))) {} \
- \
- template<class F,BOOST_PP_ENUM_PARAMS(N,class T)> \
- Weighted_point_d(Eval_functor,F const& f,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(f(BOOST_PP_ENUM_PARAMS(N,t))) {}
- /*
- template<BOOST_PP_ENUM_PARAMS(N,class T)> \
- Point_d(Eval_functor,BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t)) \
- : Rep(Eval_functor(), BOOST_PP_ENUM_PARAMS(N,t)) {}
- */
-
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-
-#endif
-
- //TODO: use references?
- Point_ point()const{
- return Point_(Eval_functor(),PDWBase(),rep());
- }
- FT_ weight()const{
- return PWBase()(rep());
- }
-
-};
-
-} //namespace Wrap
-} //namespace CGAL
-
-#endif // CGAL_WRAPPER_SPHERE_D_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/function_objects_cartesian.h b/include/gudhi_patches/CGAL/NewKernel_d/function_objects_cartesian.h
deleted file mode 100644
index 5a132ad2..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/function_objects_cartesian.h
+++ /dev/null
@@ -1,1355 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_KERNEL_D_FUNCTION_OBJECTS_CARTESIAN_H
-#define CGAL_KERNEL_D_FUNCTION_OBJECTS_CARTESIAN_H
-
-#include <CGAL/NewKernel_d/utils.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/Uncertain.h>
-#include <CGAL/NewKernel_d/store_kernel.h>
-#include <CGAL/is_iterator.h>
-#include <CGAL/iterator_from_indices.h>
-#include <CGAL/number_utils.h>
-#include <CGAL/Kernel/Return_base_tag.h>
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/transforming_pair_iterator.h>
-#include <CGAL/NewKernel_d/functor_tags.h>
-#include <CGAL/NewKernel_d/functor_properties.h>
-#include <CGAL/predicates/sign_of_determinant.h>
-#include <functional>
-#ifdef CGAL_CXX11
-#include <initializer_list>
-#endif
-
-namespace CGAL {
-namespace CartesianDKernelFunctors {
-namespace internal {
-template<class,int> struct Dimension_at_most { enum { value = false }; };
-template<int a,int b> struct Dimension_at_most<Dimension_tag<a>,b> {
- enum { value = (a <= b) };
-};
-}
-
-template<class R_,class D_=typename R_::Default_ambient_dimension,bool=internal::Dimension_at_most<D_,6>::value> struct Orientation_of_points : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Orientation_of_points)
- typedef R_ R;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename R::LA::Square_matrix Matrix;
-
- template<class Iter>
- result_type operator()(Iter f, Iter e)const{
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- Point const& p0=*f++;
- int d=pd(p0);
- Matrix m(d,d);
- // FIXME: this writes the vector coordinates in lines ? check all the other uses in this file, this may be wrong for some.
- for(int i=0;f!=e;++f,++i) {
- Point const& p=*f;
- for(int j=0;j<d;++j){
- m(i,j)=c(p,j)-c(p0,j);
- // should we cache the coordinates of p0 in case they are computed?
- }
- }
- return R::LA::sign_of_determinant(CGAL_MOVE(m));
- }
-
-#ifdef CGAL_CXX11
- // Since the dimension is at least 2, there are at least 3 points and no ambiguity with iterators.
- // template <class...U,class=typename std::enable_if<std::is_same<Dimension_tag<sizeof...(U)-1>,typename R::Default_ambient_dimension>::value>::type>
- template <class...U,class=typename std::enable_if<(sizeof...(U)>=3)>::type>
- result_type operator()(U&&...u) const {
- return operator()({std::forward<U>(u)...});
- }
-
- template <class P>
- result_type operator()(std::initializer_list<P> l) const {
- return operator()(l.begin(),l.end());
- }
-#else
- //should we make it template to avoid instantiation for wrong dim?
- //or iterate outside the class?
-#define CGAL_VAR(Z,J,I) m(I,J)=c(p##I,J)-c(x,J);
-#define CGAL_VAR2(Z,I,N) BOOST_PP_REPEAT(N,CGAL_VAR,I)
-#define CGAL_CODE(Z,N,_) \
- result_type operator()(Point const&x, BOOST_PP_ENUM_PARAMS(N,Point const&p)) const { \
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel()); \
- Matrix m(N,N); \
- BOOST_PP_REPEAT(N,CGAL_VAR2,N) \
- return R::LA::sign_of_determinant(CGAL_MOVE(m)); \
- }
-
-BOOST_PP_REPEAT_FROM_TO(7, 10, CGAL_CODE, _ )
- // No need to do it for <=6, since that uses a different code path
-#undef CGAL_CODE
-#undef CGAL_VAR2
-#undef CGAL_VAR
-#endif
-};
-
-#ifdef CGAL_CXX11
-template<class R_,int d> struct Orientation_of_points<R_,Dimension_tag<d>,true> : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Orientation_of_points)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- template<class>struct Help;
- template<int...I>struct Help<Indices<I...> > {
- template<class C,class P,class T> result_type operator()(C const&c,P const&x,T&&t)const{
- return sign_of_determinant<RT>(c(std::get<I/d>(t),I%d)-c(x,I%d)...);
- }
- };
- template<class P0,class...P> result_type operator()(P0 const&x,P&&...p)const{
- static_assert(d==sizeof...(P),"Wrong number of arguments");
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- return Help<typename N_increasing_indices<d*d>::type>()(c,x,std::forward_as_tuple(std::forward<P>(p)...));
- }
-
-
- template<int N,class Iter,class...U> result_type help2(Dimension_tag<N>, Iter f, Iter const&e, U&&...u)const{
- auto const&p=*f;
- return help2(Dimension_tag<N-1>(),++f,e,std::forward<U>(u)...,p);
- }
- template<class Iter,class...U> result_type help2(Dimension_tag<0>, Iter CGAL_assertion_code(f), Iter const& CGAL_assertion_code(e), U&&...u)const{
- CGAL_assertion(f==e);
- return operator()(std::forward<U>(u)...);
- }
- template<class Iter>
- result_type operator()(Iter f, Iter e)const{
- return help2(Dimension_tag<d+1>(),f,e);
- }
-};
-#else
-#define CGAL_VAR(Z,J,I) c(p##I,J)-x##J
-#define CGAL_VAR2(Z,I,N) BOOST_PP_ENUM(N,CGAL_VAR,I)
-#define CGAL_VAR3(Z,N,_) Point const&p##N=*++f;
-#define CGAL_VAR4(Z,N,_) RT const&x##N=c(x,N);
-#define CGAL_CODE(Z,N,_) \
-template<class R_> struct Orientation_of_points<R_,Dimension_tag<N>,true> : private Store_kernel<R_> { \
- CGAL_FUNCTOR_INIT_STORE(Orientation_of_points) \
- typedef R_ R; \
- typedef typename Get_type<R, RT_tag>::type RT; \
- typedef typename Get_type<R, Point_tag>::type Point; \
- typedef typename Get_type<R, Orientation_tag>::type result_type; \
- result_type operator()(Point const&x, BOOST_PP_ENUM_PARAMS(N,Point const&p)) const { \
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel()); \
- BOOST_PP_REPEAT(N,CGAL_VAR4,) \
- return sign_of_determinant<RT>(BOOST_PP_ENUM(N,CGAL_VAR2,N)); \
- } \
- template<class Iter> \
- result_type operator()(Iter f, Iter CGAL_assertion_code(e))const{ \
- Point const&x=*f; \
- BOOST_PP_REPEAT(N,CGAL_VAR3,) \
- CGAL_assertion(++f==e); \
- return operator()(x,BOOST_PP_ENUM_PARAMS(N,p)); \
- } \
-};
-
- BOOST_PP_REPEAT_FROM_TO(2, 7, CGAL_CODE, _ )
-#undef CGAL_CODE
-#undef CGAL_VAR4
-#undef CGAL_VAR3
-#undef CGAL_VAR2
-#undef CGAL_VAR
-
-#endif
-
-template<class R_> struct Orientation_of_points<R_,Dimension_tag<1>,true> : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Orientation_of_points)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- result_type operator()(Point const&x, Point const&y) const {
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- // No sign_of_determinant(RT) :-(
- return CGAL::compare(c(y,0),c(x,0));
- }
- template<class Iter>
- result_type operator()(Iter f, Iter CGAL_assertion_code(e))const{
- Point const&x=*f;
- Point const&y=*++f;
- CGAL_assertion(++f==e);
- return operator()(x,y);
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Orientation_of_points_tag,(CartesianDKernelFunctors::Orientation_of_points<K>),(Point_tag),(Point_dimension_tag,Compute_point_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Orientation_of_vectors : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Orientation_of_vectors)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename R::LA::Square_matrix Matrix;
-
- template<class Iter>
- result_type operator()(Iter f, Iter e)const{
- typename Get_functor<R, Compute_vector_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type vd(this->kernel());
- // FIXME: Uh? Using it on a vector ?!
- Vector const& v0=*f;
- int d=vd(v0);
- Matrix m(d,d);
- for(int j=0;j<d;++j){
- m(0,j)=c(v0,j);
- }
- for(int i=1;++f!=e;++i) {
- Vector const& v=*f;
- for(int j=0;j<d;++j){
- m(i,j)=c(v,j);
- }
- }
- return R::LA::sign_of_determinant(CGAL_MOVE(m));
- }
-
-#ifdef CGAL_CXX11
- template <class...U,class=typename std::enable_if<(sizeof...(U)>=3)>::type>
- result_type operator()(U&&...u) const {
- return operator()({std::forward<U>(u)...});
- }
-
- template <class V>
- result_type operator()(std::initializer_list<V> l) const {
- return operator()(l.begin(),l.end());
- }
-#else
- //TODO
-#endif
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Orientation_of_vectors_tag,(CartesianDKernelFunctors::Orientation_of_vectors<K>),(Vector_tag),(Point_dimension_tag,Compute_vector_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Linear_rank : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Linear_rank)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- // Computing a sensible Uncertain<int> is not worth it
- typedef int result_type;
- typedef typename R::LA::Dynamic_matrix Matrix;
-
- template<class Iter>
- result_type operator()(Iter f, Iter e)const{
- typename Get_functor<R, Compute_vector_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type vd(this->kernel());
- std::ptrdiff_t n=std::distance(f,e);
- if (n==0) return 0;
- Vector const& v0 = *f;
- // FIXME: Uh? Using it on a vector ?!
- int d=vd(v0);
- Matrix m(d,n);
- for(int j=0;j<d;++j){
- m(j,0)=c(v0,j);
- }
- for(int i=1; ++f!=e; ++i){
- Vector const& v = *f;
- for(int j=0;j<d;++j){
- m(j,i)=c(v,j);
- }
- }
- return R::LA::rank(CGAL_MOVE(m));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Linear_rank_tag,(CartesianDKernelFunctors::Linear_rank<K>),(Vector_tag),(Point_dimension_tag,Compute_vector_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Linearly_independent : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Linearly_independent)
- typedef R_ R;
- typedef typename Get_type<R, Bool_tag>::type result_type;
-
- template<class Iter>
- result_type operator()(Iter f, Iter e)const{
- typename Get_functor<R, Point_dimension_tag>::type vd(this->kernel());
- std::ptrdiff_t n=std::distance(f,e);
- // FIXME: Uh? Using it on a vector ?!
- int d=vd(*f);
- if (n>d) return false;
- typename Get_functor<R, Linear_rank_tag>::type lr(this->kernel());
- return lr(f,e) == n;
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Linearly_independent_tag,(CartesianDKernelFunctors::Linearly_independent<K>),(Vector_tag),(Point_dimension_tag,Linear_rank_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Contained_in_linear_hull : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Contained_in_linear_hull)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- // Computing a sensible Uncertain<bool> is not worth it
- typedef bool result_type;
- typedef typename R::LA::Dynamic_matrix Matrix;
-
- template<class Iter,class V>
- result_type operator()(Iter f, Iter e,V const&w)const{
- typename Get_functor<R, Compute_vector_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type vd(this->kernel());
- std::ptrdiff_t n=std::distance(f,e);
- if (n==0) return false;
- // FIXME: Uh? Using it on a vector ?!
- int d=vd(w);
- Matrix m(d,n+1);
- for(int i=0; f!=e; ++f,++i){
- Vector const& v = *f;
- for(int j=0;j<d;++j){
- m(j,i)=c(v,j);
- }
- }
- for(int j=0;j<d;++j){
- m(j,n)=c(w,j);
- }
- int r1 = R::LA::rank(m);
- // FIXME: Don't use eigen directly, go through an interface in LA...
- m.conservativeResize(Eigen::NoChange, n);
- int r2 = R::LA::rank(CGAL_MOVE(m));
- return r1 == r2;
- // TODO: This is very very far from optimal...
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Contained_in_linear_hull_tag,(CartesianDKernelFunctors::Contained_in_linear_hull<K>),(Vector_tag),(Point_dimension_tag,Compute_vector_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Affine_rank : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Affine_rank)
- typedef R_ R;
- typedef typename Get_type<R, Point_tag>::type Point;
- // Computing a sensible Uncertain<int> is not worth it
- typedef int result_type;
- typedef typename R::LA::Dynamic_matrix Matrix;
-
- template<class Iter>
- result_type operator()(Iter f, Iter e)const{
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- int n=(int)std::distance(f,e);
- if (--n<=0) return n;
- Point const& p0 = *f;
- int d=pd(p0);
- Matrix m(d,n);
- for(int i=0; ++f!=e; ++i){
- Point const& p = *f;
- for(int j=0;j<d;++j){
- m(j,i)=c(p,j)-c(p0,j);
- // TODO: cache p0[j] in case it is computed?
- }
- }
- return R::LA::rank(CGAL_MOVE(m));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Affine_rank_tag,(CartesianDKernelFunctors::Affine_rank<K>),(Point_tag),(Point_dimension_tag,Compute_point_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Affinely_independent : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Affinely_independent)
- typedef R_ R;
- typedef typename Get_type<R, Bool_tag>::type result_type;
-
- template<class Iter>
- result_type operator()(Iter f, Iter e)const{
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- std::ptrdiff_t n=std::distance(f,e);
- int d=pd(*f);
- if (--n>d) return false;
- typename Get_functor<R, Affine_rank_tag>::type ar(this->kernel());
- return ar(f,e) == n;
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Affinely_independent_tag,(CartesianDKernelFunctors::Affinely_independent<K>),(Point_tag),(Point_dimension_tag,Affine_rank_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Contained_in_simplex : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Contained_in_simplex)
- typedef R_ R;
- typedef typename Get_type<R, Point_tag>::type Point;
- // Computing a sensible Uncertain<*> is not worth it
- // typedef typename Get_type<R, Boolean_tag>::type result_type;
- typedef bool result_type;
- typedef typename Increment_dimension<typename R::Default_ambient_dimension>::type D1;
- typedef typename Increment_dimension<typename R::Max_ambient_dimension>::type D2;
- typedef typename R::LA::template Rebind_dimension<D1,D2>::Other LA;
- typedef typename LA::Dynamic_matrix Matrix;
- typedef typename LA::Dynamic_vector DynVec;
- typedef typename LA::Vector Vec;
-
- template<class Iter, class P>
- result_type operator()(Iter f, Iter e, P const&q)const{
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- std::ptrdiff_t n=std::distance(f,e);
- if (n==0) return false;
- int d=pd(q);
- Matrix m(d+1,n);
- DynVec a(n);
- // FIXME: Should use the proper vector constructor (Iterator_and_last)
- Vec b(d+1);
- for(int j=0;j<d;++j) b[j]=c(q,j);
- b[d]=1;
-
- for(int i=0; f!=e; ++i,++f){
- Point const& p = *f;
- for(int j=0;j<d;++j){
- m(j,i)=c(p,j);
- }
- m(d,i)=1;
- }
- // If the simplex has full dimension, there must be a solution, only the signs need to be checked.
- if (n == d+1)
- LA::solve(a,CGAL_MOVE(m),CGAL_MOVE(b));
- else if (!LA::solve_and_check(a,CGAL_MOVE(m),CGAL_MOVE(b)))
- return false;
- for(int i=0;i<n;++i){
- if (a[i]<0) return false;
- }
- return true;
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Contained_in_simplex_tag,(CartesianDKernelFunctors::Contained_in_simplex<K>),(Point_tag),(Point_dimension_tag,Compute_point_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
- namespace internal {
- template<class Ref_>
- struct Matrix_col_access {
- typedef Ref_ result_type;
- int col;
- Matrix_col_access(int r):col(r){}
- template<class Mat> Ref_ operator()(Mat const& m, std::ptrdiff_t row)const{
- return m(row,col);
- }
- };
- }
-template<class R_> struct Linear_base : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Linear_base)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef void result_type;
- typedef typename R::LA::Dynamic_matrix Matrix;
-
- template<class Iter, class Oter>
- result_type operator()(Iter f, Iter e, Oter&o)const{
- typename Get_functor<R, Compute_vector_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type vd(this->kernel());
- typename Get_functor<R, Construct_ttag<Vector_tag> >::type cv(this->kernel());
- std::ptrdiff_t n=std::distance(f,e);
- if (n==0) return;
- Vector const& v0 = *f;
- // FIXME: Uh? Using it on a vector ?!
- int d=vd(v0);
- Matrix m(d,n);
- for(int j=0;j<d;++j){
- m(0,j)=c(v0,j);
- }
- for(int i=1; ++f!=e; ++i){
- Vector const& v = *f;
- for(int j=0;j<d;++j){
- m(i,j)=c(v,j);
- }
- }
- Matrix b = R::LA::basis(CGAL_MOVE(m));
- for(int i=0; i < R::LA::columns(b); ++i){
- //*o++ = Vector(b.col(i));
- typedef
-#ifdef CGAL_CXX11
- decltype(std::declval<const Matrix>()(0,0))
-#else
- FT
-#endif
- Ref;
- typedef Iterator_from_indices<Matrix, FT, Ref,
- internal::Matrix_col_access<Ref> > IFI;
- *o++ = cv(IFI(b,0,i),IFI(b,d,i));
- }
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Linear_base_tag,(CartesianDKernelFunctors::Linear_base<K>),(Vector_tag),(Point_dimension_tag,Compute_vector_cartesian_coordinate_tag));
-
-#if 0
-namespace CartesianDKernelFunctors {
-template<class R_,bool=boost::is_same<typename R_::Point,typename R_::Vector>::value> struct Orientation : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Orientation)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename Get_functor<R, Orientation_of_points_tag>::type OP;
- typedef typename Get_functor<R, Orientation_of_vectors_tag>::type OV;
-
- //FIXME!!!
- //when Point and Vector are distinct types, the dispatch should be made
- //in a way that doesn't instantiate a conversion from Point to Vector
- template<class Iter>
- result_type operator()(Iter const&f, Iter const& e)const{
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- typename std::iterator_traits<Iter>::difference_type d=std::distance(f,e);
- int dim=pd(*f); // BAD
- if(d==dim) return OV(this->kernel())(f,e);
- CGAL_assertion(d==dim+1);
- return OP(this->kernel())(f,e);
- }
- //TODO: version that takes objects directly instead of iterators
-};
-
-template<class R_> struct Orientation<R_,false> : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Orientation)
- typedef R_ R;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Orientation_tag>::type result_type;
- typedef typename Get_functor<R, Orientation_of_points_tag>::type OP;
- typedef typename Get_functor<R, Orientation_of_vectors_tag>::type OV;
- typedef typename R::LA::Square_matrix Matrix;
-
- //FIXME!!!
- //when Point and Vector are distinct types, the dispatch should be made
- //in a way that doesn't instantiate a conversion from Point to Vector
- template<class Iter>
- typename boost::enable_if<is_iterator_to<Iter,Point>,result_type>::type
- operator()(Iter const&f, Iter const& e)const{
- return OP(this->kernel())(f,e);
- }
- template<class Iter>
- typename boost::enable_if<is_iterator_to<Iter,Vector>,result_type>::type
- operator()(Iter const&f, Iter const& e)const{
- return OV(this->kernel())(f,e);
- }
- //TODO: version that takes objects directly instead of iterators
-};
-}
-#endif
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Power_side_of_power_sphere_raw : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Power_side_of_power_sphere_raw)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Oriented_side_tag>::type result_type;
- typedef typename Increment_dimension<typename R::Default_ambient_dimension>::type D1;
- typedef typename Increment_dimension<typename R::Max_ambient_dimension>::type D2;
- typedef typename R::LA::template Rebind_dimension<D1,D2>::Other LA;
- typedef typename LA::Square_matrix Matrix;
-
- template<class IterP, class IterW, class Pt, class Wt>
- result_type operator()(IterP f, IterP const& e, IterW fw, Pt const& p0, Wt const& w0) const {
- typedef typename Get_functor<R, Squared_distance_to_origin_tag>::type Sqdo;
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
-
- int d=pd(p0);
- Matrix m(d+1,d+1);
- if(CGAL::Is_stored<Sqdo>::value) {
- Sqdo sqdo(this->kernel());
- FT const& h0 = sqdo(p0) - w0;
- for(int i=0;f!=e;++f,++fw,++i) {
- Point const& p=*f;
- for(int j=0;j<d;++j){
- RT const& x=c(p,j);
- m(i,j)=x-c(p0,j);
- }
- m(i,d) = sqdo(p) - *fw - h0;
- }
- } else {
- for(int i=0;f!=e;++f,++fw,++i) {
- Point const& p=*f;
- m(i,d) = w0 - *fw;
- for(int j=0;j<d;++j){
- RT const& x=c(p,j);
- m(i,j)=x-c(p0,j);
- m(i,d)+=CGAL::square(m(i,j));
- }
- }
- }
- if(d%2)
- return -LA::sign_of_determinant(CGAL_MOVE(m));
- else
- return LA::sign_of_determinant(CGAL_MOVE(m));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Power_side_of_power_sphere_raw_tag,(CartesianDKernelFunctors::Power_side_of_power_sphere_raw<K>),(Point_tag),(Point_dimension_tag,Squared_distance_to_origin_tag,Compute_point_cartesian_coordinate_tag));
-
-// TODO: make Side_of_oriented_sphere call Power_side_of_power_sphere_raw
-namespace CartesianDKernelFunctors {
-template<class R_> struct Side_of_oriented_sphere : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Side_of_oriented_sphere)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Oriented_side_tag>::type result_type;
- typedef typename Increment_dimension<typename R::Default_ambient_dimension>::type D1;
- typedef typename Increment_dimension<typename R::Max_ambient_dimension>::type D2;
- typedef typename R::LA::template Rebind_dimension<D1,D2>::Other LA;
- typedef typename LA::Square_matrix Matrix;
-
- template<class Iter>
- result_type operator()(Iter f, Iter const& e)const{
- Point const& p0=*f++; // *--e ?
- return this->operator()(f,e,p0);
- }
-
- template<class Iter>
- result_type operator()(Iter f, Iter const& e, Point const& p0) const {
- typedef typename Get_functor<R, Squared_distance_to_origin_tag>::type Sqdo;
- typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
-
- int d=pd(p0);
- Matrix m(d+1,d+1);
- if(CGAL::Is_stored<Sqdo>::value) {
- Sqdo sqdo(this->kernel());
- for(int i=0;f!=e;++f,++i) {
- Point const& p=*f;
- for(int j=0;j<d;++j){
- RT const& x=c(p,j);
- m(i,j)=x-c(p0,j);
- }
- m(i,d) = sqdo(p) - sqdo(p0);
- }
- } else {
- for(int i=0;f!=e;++f,++i) {
- Point const& p=*f;
- m(i,d) = 0;
- for(int j=0;j<d;++j){
- RT const& x=c(p,j);
- m(i,j)=x-c(p0,j);
- m(i,d)+=CGAL::square(m(i,j));
- }
- }
- }
- if(d%2)
- return -LA::sign_of_determinant(CGAL_MOVE(m));
- else
- return LA::sign_of_determinant(CGAL_MOVE(m));
- }
-
-#ifdef CGAL_CXX11
- template <class...U,class=typename std::enable_if<(sizeof...(U)>=4)>::type>
- result_type operator()(U&&...u) const {
- return operator()({std::forward<U>(u)...});
- }
-
- template <class P>
- result_type operator()(std::initializer_list<P> l) const {
- return operator()(l.begin(),l.end());
- }
-#else
- //TODO
-#endif
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Side_of_oriented_sphere_tag,(CartesianDKernelFunctors::Side_of_oriented_sphere<K>),(Point_tag),(Point_dimension_tag,Squared_distance_to_origin_tag,Compute_point_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
-template <class R_> struct Construct_circumcenter : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Construct_circumcenter)
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef Point result_type;
- typedef typename Get_type<R_, FT_tag>::type FT;
- template <class Iter>
- result_type operator()(Iter f, Iter e)const{
- typedef typename Get_type<R_, Point_tag>::type Point;
- typedef typename R_::LA LA;
- typename Get_functor<R_, Compute_point_cartesian_coordinate_tag>::type c(this->kernel());
- typename Get_functor<R_, Construct_ttag<Point_tag> >::type cp(this->kernel());
- typename Get_functor<R_, Point_dimension_tag>::type pd(this->kernel());
- typename Get_functor<R_, Squared_distance_to_origin_tag>::type sdo(this->kernel());
-
- Point const& p0=*f;
- int d = pd(p0);
- if (d+1 == std::distance(f,e))
- {
- // 2*(x-y).c == x^2-y^2
- typedef typename LA::Square_matrix Matrix;
- typedef typename LA::Vector Vec;
- typedef typename LA::Construct_vector CVec;
- FT const& n0 = sdo(p0);
- Matrix m(d,d);
- Vec b = typename CVec::Dimension()(d);
- // Write the point coordinates in lines.
- int i;
- for(i=0; ++f!=e; ++i) {
- Point const& p=*f;
- for(int j=0;j<d;++j) {
- m(i,j)=2*(c(p,j)-c(p0,j));
- b[i] = sdo(p) - n0;
- }
- }
- CGAL_assertion (i == d);
- Vec res = typename CVec::Dimension()(d);;
- //std::cout << "Mat: " << m << "\n Vec: " << one << std::endl;
- LA::solve(res, CGAL_MOVE(m), CGAL_MOVE(b));
- //std::cout << "Sol: " << res << std::endl;
- return cp(d,LA::vector_begin(res),LA::vector_end(res));
- }
- else
- {
- /*
- * Matrix P=(p1, p2, ...) (each point as a column)
- * Matrix Q=2*t(p2-p1,p3-p1, ...) (each vector as a line)
- * Matrix M: QP, adding a line of 1 at the top
- * Vector B: (1, p2^2-p1^2, p3^2-p1^2, ...)
- * Solve ML=B, the center of the sphere is PL
- *
- * It would likely be faster to write P then transpose, multiply,
- * etc instead of doing it by hand.
- */
- // TODO: check for degenerate cases?
-
- typedef typename R_::Max_ambient_dimension D2;
- typedef typename R_::LA::template Rebind_dimension<Dynamic_dimension_tag,D2>::Other LAd;
- typedef typename LAd::Square_matrix Matrix;
- typedef typename LAd::Vector Vec;
- typename Get_functor<R_, Scalar_product_tag>::type sp(this->kernel());
- int k=static_cast<int>(std::distance(f,e));
- Matrix m(k,k);
- Vec b(k);
- Vec l(k);
- int j,i=0;
- for(Iter f2=f;f2!=e;++f2,++i){
- b(i)=m(i,i)=sdo(*f2);
- j=0;
- for(Iter f3=f;f3!=e;++f3,++j){
- m(j,i)=m(i,j)=sp(*f2,*f3);
- }
- }
- for(i=1;i<k;++i){
- b(i)-=b(0);
- for(j=0;j<k;++j){
- m(i,j)=2*(m(i,j)-m(0,j));
- }
- }
- for(j=0;j<k;++j) m(0,j)=1;
- b(0)=1;
-
- LAd::solve(l,CGAL_MOVE(m),CGAL_MOVE(b));
-
- typename LA::Vector center=typename LA::Construct_vector::Dimension()(d);
- for(i=0;i<d;++i) center(i)=0;
- j=0;
- for(Iter f2=f;f2!=e;++f2,++j){
- for(i=0;i<d;++i){
- center(i)+=l(j)*c(*f2,i);
- }
- }
-
- return cp(LA::vector_begin(center),LA::vector_end(center));
- }
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Construct_circumcenter_tag,(CartesianDKernelFunctors::Construct_circumcenter<K>),(Point_tag),(Construct_ttag<Point_tag>,Compute_point_cartesian_coordinate_tag,Scalar_product_tag,Squared_distance_to_origin_tag,Point_dimension_tag));
-
-namespace CartesianDKernelFunctors {
-template <class R_> struct Squared_circumradius : Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Squared_circumradius)
- typedef typename Get_type<R_, FT_tag>::type result_type;
- template <class Iter>
- result_type operator()(Iter f, Iter e)const{
- typename Get_functor<R_, Construct_circumcenter_tag>::type cc(this->kernel());
- typename Get_functor<R_, Squared_distance_tag>::type sd(this->kernel());
- return sd(cc(f, e), *f);
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Squared_circumradius_tag,(CartesianDKernelFunctors::Squared_circumradius<K>),(Point_tag),(Construct_circumcenter_tag,Squared_distance_tag));
-
-namespace CartesianDKernelFunctors {
-// TODO: implement it directly, it should be at least as fast as Side_of_oriented_sphere.
-template<class R_> struct Side_of_bounded_sphere : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Side_of_bounded_sphere)
- typedef R_ R;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Bounded_side_tag>::type result_type;
-
- template<class Iter>
- result_type operator()(Iter f, Iter const& e) const {
- Point const& p0 = *f++; // *--e ?
- typename Get_functor<R, Point_dimension_tag>::type pd(this->kernel());
- //FIXME: Doesn't work for non-full dimension.
- CGAL_assertion (std::distance(f,e) == pd(p0)+1);
- return operator() (f, e, p0);
- }
-
- template<class Iter>
- result_type operator()(Iter const& f, Iter const& e, Point const& p0) const {
- typename Get_functor<R, Side_of_oriented_sphere_tag>::type sos (this->kernel());
- typename Get_functor<R, Orientation_of_points_tag>::type op (this->kernel());
- // enum_cast is not very generic, but since this function isn't supposed to remain like this...
- return enum_cast<Bounded_side> (sos (f, e, p0) * op (f, e));
- }
-
-#ifdef CGAL_CXX11
- template <class...U,class=typename std::enable_if<(sizeof...(U)>=4)>::type>
- result_type operator()(U&&...u) const {
- return operator()({std::forward<U>(u)...});
- }
-
- template <class P>
- result_type operator()(std::initializer_list<P> l) const {
- return operator()(l.begin(),l.end());
- }
-#else
- //TODO
-#endif
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Side_of_bounded_sphere_tag,(CartesianDKernelFunctors::Side_of_bounded_sphere<K>),(Point_tag),(Side_of_oriented_sphere_tag,Orientation_of_points_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Side_of_bounded_circumsphere : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Side_of_bounded_circumsphere)
- typedef typename Get_type<R_, Bounded_side_tag>::type result_type;
-
- template<class Iter, class P>
- result_type operator()(Iter f, Iter const& e, P const& p0) const {
- // TODO: Special case when the dimension is full.
- typename Get_functor<R_, Construct_circumcenter_tag>::type cc(this->kernel());
- typename Get_functor<R_, Compare_distance_tag>::type cd(this->kernel());
-
- return enum_cast<Bounded_side>(cd(cc(f, e), *f, p0));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Side_of_bounded_circumsphere_tag,(CartesianDKernelFunctors::Side_of_bounded_circumsphere<K>),(Point_tag),(Squared_distance_tag,Construct_circumcenter_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Point_to_vector : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Point_to_vector)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_functor<R, Construct_ttag<Vector_tag> >::type CV;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CI;
- typedef Vector result_type;
- typedef Point argument_type;
- result_type operator()(argument_type const&v)const{
- CI ci(this->kernel());
- return CV(this->kernel())(ci(v,Begin_tag()),ci(v,End_tag()));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Point_to_vector_tag,(CartesianDKernelFunctors::Point_to_vector<K>),(Point_tag,Vector_tag),(Construct_ttag<Vector_tag>, Construct_ttag<Point_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Vector_to_point : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Vector_to_point)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_functor<R, Construct_ttag<Point_tag> >::type CP;
- typedef typename Get_functor<R, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CI;
- typedef Point result_type;
- typedef Vector argument_type;
- result_type operator()(argument_type const&v)const{
- CI ci(this->kernel());
- return CP(this->kernel())(ci(v,Begin_tag()),ci(v,End_tag()));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Vector_to_point_tag,(CartesianDKernelFunctors::Vector_to_point<K>),(Point_tag,Vector_tag),(Construct_ttag<Point_tag>, Construct_ttag<Vector_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Opposite_vector : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Opposite_vector)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_functor<R, Construct_ttag<Vector_tag> >::type CV;
- typedef typename Get_functor<R, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CI;
- typedef Vector result_type;
- typedef Vector argument_type;
- result_type operator()(Vector const&v)const{
- CI ci(this->kernel());
- return CV(this->kernel())(make_transforming_iterator(ci(v,Begin_tag()),std::negate<RT>()),make_transforming_iterator(ci(v,End_tag()),std::negate<RT>()));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Opposite_vector_tag,(CartesianDKernelFunctors::Opposite_vector<K>),(Vector_tag),(Construct_ttag<Vector_tag>, Construct_ttag<Vector_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Scaled_vector : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Scaled_vector)
- typedef R_ R;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_functor<R, Construct_ttag<Vector_tag> >::type CV;
- typedef typename Get_functor<R, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CI;
- typedef Vector result_type;
- typedef Vector first_argument_type;
- typedef FT second_argument_type;
- result_type operator()(Vector const&v,FT const& s)const{
- CI ci(this->kernel());
- return CV(this->kernel())(make_transforming_iterator(ci(v,Begin_tag()),Scale<FT>(s)),make_transforming_iterator(ci(v,End_tag()),Scale<FT>(s)));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Scaled_vector_tag,(CartesianDKernelFunctors::Scaled_vector<K>),(Vector_tag),(Construct_ttag<Vector_tag>, Construct_ttag<Vector_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Sum_of_vectors : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Sum_of_vectors)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_functor<R, Construct_ttag<Vector_tag> >::type CV;
- typedef typename Get_functor<R, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CI;
- typedef Vector result_type;
- typedef Vector first_argument_type;
- typedef Vector second_argument_type;
- result_type operator()(Vector const&a, Vector const&b)const{
- CI ci(this->kernel());
- return CV(this->kernel())(make_transforming_pair_iterator(ci(a,Begin_tag()),ci(b,Begin_tag()),std::plus<RT>()),make_transforming_pair_iterator(ci(a,End_tag()),ci(b,End_tag()),std::plus<RT>()));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Sum_of_vectors_tag,(CartesianDKernelFunctors::Sum_of_vectors<K>),(Vector_tag),(Construct_ttag<Vector_tag>, Construct_ttag<Vector_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Difference_of_vectors : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Difference_of_vectors)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_functor<R, Construct_ttag<Vector_tag> >::type CV;
- typedef typename Get_functor<R, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CI;
- typedef Vector result_type;
- typedef Vector first_argument_type;
- typedef Vector second_argument_type;
- result_type operator()(Vector const&a, Vector const&b)const{
- CI ci(this->kernel());
- return CV(this->kernel())(make_transforming_pair_iterator(ci(a,Begin_tag()),ci(b,Begin_tag()),std::minus<RT>()),make_transforming_pair_iterator(ci(a,End_tag()),ci(b,End_tag()),std::minus<RT>()));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Difference_of_vectors_tag,(CartesianDKernelFunctors::Difference_of_vectors<K>),(Vector_tag),(Construct_ttag<Vector_tag>, Construct_ttag<Vector_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Translated_point : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Translated_point)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_functor<R, Construct_ttag<Point_tag> >::type CP;
- typedef typename Get_functor<R, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CVI;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CPI;
- typedef Point result_type;
- typedef Point first_argument_type;
- typedef Vector second_argument_type;
- result_type operator()(Point const&a, Vector const&b)const{
- CVI cvi(this->kernel());
- CPI cpi(this->kernel());
- return CP(this->kernel())(make_transforming_pair_iterator(cpi(a,Begin_tag()),cvi(b,Begin_tag()),std::plus<RT>()),make_transforming_pair_iterator(cpi(a,End_tag()),cvi(b,End_tag()),std::plus<RT>()));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Translated_point_tag,(CartesianDKernelFunctors::Translated_point<K>),(Point_tag, Vector_tag),(Construct_ttag<Point_tag>, Construct_ttag<Vector_cartesian_const_iterator_tag>, Construct_ttag<Point_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Difference_of_points : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Difference_of_points)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_functor<R, Construct_ttag<Vector_tag> >::type CV;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CI;
- typedef Vector result_type;
- typedef Point first_argument_type;
- typedef Point second_argument_type;
- result_type operator()(Point const&a, Point const&b)const{
- CI ci(this->kernel());
- return CV(this->kernel())(make_transforming_pair_iterator(ci(a,Begin_tag()),ci(b,Begin_tag()),std::minus<RT>()),make_transforming_pair_iterator(ci(a,End_tag()),ci(b,End_tag()),std::minus<RT>()));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Difference_of_points_tag,(CartesianDKernelFunctors::Difference_of_points<K>),(Point_tag, Vector_tag),(Construct_ttag<Vector_tag>, Construct_ttag<Point_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Midpoint : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Midpoint)
- typedef R_ R;
- typedef typename Get_type<R, FT_tag>::type FT;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_functor<R, Construct_ttag<Point_tag> >::type CP;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CI;
- typedef Point result_type;
- typedef Point first_argument_type;
- typedef Point second_argument_type;
- // There is a division, but it will be cast to RT afterwards anyway, so maybe we could use RT.
- struct Average : std::binary_function<FT,RT,FT> {
- FT operator()(FT const&a, RT const&b)const{
- return (a+b)/2;
- }
- };
- result_type operator()(Point const&a, Point const&b)const{
- CI ci(this->kernel());
- //Divide<FT,int> half(2);
- //return CP(this->kernel())(make_transforming_iterator(make_transforming_pair_iterator(ci.begin(a),ci.begin(b),std::plus<FT>()),half),make_transforming_iterator(make_transforming_pair_iterator(ci.end(a),ci.end(b),std::plus<FT>()),half));
- return CP(this->kernel())(make_transforming_pair_iterator(ci(a,Begin_tag()),ci(b,Begin_tag()),Average()),make_transforming_pair_iterator(ci(a,End_tag()),ci(b,End_tag()),Average()));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Midpoint_tag,(CartesianDKernelFunctors::Midpoint<K>),(Point_tag),(Construct_ttag<Point_tag>, Construct_ttag<Point_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Squared_length : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Squared_length)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_functor<R, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CI;
- typedef RT result_type;
- typedef Vector argument_type;
- result_type operator()(Vector const&a)const{
- CI ci(this->kernel());
- typename Algebraic_structure_traits<RT>::Square f;
- // TODO: avoid this RT(0)+...
- return std::accumulate(make_transforming_iterator(ci(a,Begin_tag()),f),make_transforming_iterator(ci(a,End_tag()),f),RT(0));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Squared_length_tag,(CartesianDKernelFunctors::Squared_length<K>),(Vector_tag),(Construct_ttag<Vector_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Squared_distance_to_origin : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Squared_distance_to_origin)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CI;
- typedef RT result_type;
- typedef Point argument_type;
- result_type operator()(Point const&a)const{
- CI ci(this->kernel());
- typename Algebraic_structure_traits<RT>::Square f;
- // TODO: avoid this RT(0)+...
- return std::accumulate(make_transforming_iterator(ci(a,Begin_tag()),f),make_transforming_iterator(ci(a,End_tag()),f),RT(0));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Squared_distance_to_origin_tag,(CartesianDKernelFunctors::Squared_distance_to_origin<K>),(Point_tag),(Construct_ttag<Point_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Squared_distance : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Squared_distance)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CI;
- typedef RT result_type;
- typedef Point first_argument_type;
- typedef Point second_argument_type;
- struct Sq_diff : std::binary_function<RT,RT,RT> {
- RT operator()(RT const&a, RT const&b)const{
- return CGAL::square(a-b);
- }
- };
- result_type operator()(Point const&a, Point const&b)const{
- CI ci(this->kernel());
- Sq_diff f;
- // TODO: avoid this RT(0)+...
- return std::accumulate(make_transforming_pair_iterator(ci(a,Begin_tag()),ci(b,Begin_tag()),f),make_transforming_pair_iterator(ci(a,End_tag()),ci(b,End_tag()),f),RT(0));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Squared_distance_tag,(CartesianDKernelFunctors::Squared_distance<K>),(Point_tag),(Construct_ttag<Point_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Scalar_product : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Scalar_product)
- typedef R_ R;
- typedef typename Get_type<R, RT_tag>::type RT;
- typedef typename Get_type<R, Vector_tag>::type Vector;
- typedef typename Get_functor<R, Construct_ttag<Vector_cartesian_const_iterator_tag> >::type CI;
- typedef RT result_type;
- typedef Vector first_argument_type;
- typedef Vector second_argument_type;
- result_type operator()(Vector const&a, Vector const&b)const{
- CI ci(this->kernel());
- std::multiplies<RT> f;
- // TODO: avoid this RT(0)+...
- return std::accumulate(
- make_transforming_pair_iterator(ci(a,Begin_tag()),ci(b,Begin_tag()),f),
- make_transforming_pair_iterator(ci(a, End_tag()),ci(b, End_tag()),f),
- RT(0));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Scalar_product_tag,(CartesianDKernelFunctors::Scalar_product<K>),(Vector_tag),(Construct_ttag<Vector_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Compare_distance : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Compare_distance)
- typedef R_ R;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_functor<R, Squared_distance_tag>::type CSD;
- typedef typename Get_type<R, Comparison_result_tag>::type result_type;
- typedef Point first_argument_type;
- typedef Point second_argument_type;
- typedef Point third_argument_type; // why am I doing this already?
- typedef Point fourth_argument_type;
- result_type operator()(Point const&a, Point const&b, Point const&c)const{
- CSD csd(this->kernel());
- return CGAL_NTS compare(csd(a,b),csd(a,c));
- }
- result_type operator()(Point const&a, Point const&b, Point const&c, Point const&d)const{
- CSD csd(this->kernel());
- return CGAL_NTS compare(csd(a,b),csd(c,d));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Compare_distance_tag,(CartesianDKernelFunctors::Compare_distance<K>),(Point_tag),(Squared_distance_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Less_point_cartesian_coordinate : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Less_point_cartesian_coordinate)
- typedef R_ R;
- typedef typename Get_type<R, Bool_tag>::type result_type;
- typedef typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type Cc;
- // TODO: This is_exact thing should be reengineered.
- // the goal is to have a way to tell: don't filter this
- typedef typename CGAL::Is_exact<Cc> Is_exact;
-
- template<class V,class W,class I>
- result_type operator()(V const&a, W const&b, I i)const{
- Cc c(this->kernel());
- return c(a,i)<c(b,i);
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Less_point_cartesian_coordinate_tag,(CartesianDKernelFunctors::Less_point_cartesian_coordinate<K>),(),(Compute_point_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Compare_point_cartesian_coordinate : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Compare_point_cartesian_coordinate)
- typedef R_ R;
- typedef typename Get_type<R, Comparison_result_tag>::type result_type;
- typedef typename Get_functor<R, Compute_point_cartesian_coordinate_tag>::type Cc;
- // TODO: This is_exact thing should be reengineered.
- // the goal is to have a way to tell: don't filter this
- typedef typename CGAL::Is_exact<Cc> Is_exact;
-
- template<class V,class W,class I>
- result_type operator()(V const&a, W const&b, I i)const{
- Cc c(this->kernel());
- return CGAL_NTS compare(c(a,i),c(b,i));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Compare_point_cartesian_coordinate_tag,(CartesianDKernelFunctors::Compare_point_cartesian_coordinate<K>),(),(Compute_point_cartesian_coordinate_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Compare_lexicographically : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Compare_lexicographically)
- typedef R_ R;
- typedef typename Get_type<R, Comparison_result_tag>::type result_type;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CI;
- // TODO: This is_exact thing should be reengineered.
- // the goal is to have a way to tell: don't filter this
- typedef typename CGAL::Is_exact<CI> Is_exact;
-
- template<class V,class W>
- result_type operator()(V const&a, W const&b)const{
- CI c(this->kernel());
-#ifdef CGAL_CXX11
- auto
-#else
- typename CI::result_type
-#endif
- a_begin=c(a,Begin_tag()),
- b_begin=c(b,Begin_tag()),
- a_end=c(a,End_tag());
- result_type res;
- // can't we do slightly better for Uncertain<*> ?
- // after res=...; if(is_uncertain(res))return indeterminate<result_type>();
- do res=CGAL_NTS compare(*a_begin++,*b_begin++);
- while(a_begin!=a_end && res==EQUAL);
- return res;
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Compare_lexicographically_tag,(CartesianDKernelFunctors::Compare_lexicographically<K>),(),(Construct_ttag<Point_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Less_lexicographically : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Less_lexicographically)
- typedef R_ R;
- typedef typename Get_type<R, Bool_tag>::type result_type;
- typedef typename Get_functor<R, Compare_lexicographically_tag>::type CL;
- typedef typename CGAL::Is_exact<CL> Is_exact;
-
- template <class V, class W>
- result_type operator() (V const&a, W const&b) const {
- CL c (this->kernel());
- return c(a,b) < 0;
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Less_lexicographically_tag,(CartesianDKernelFunctors::Less_lexicographically<K>),(),(Compare_lexicographically_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Less_or_equal_lexicographically : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Less_or_equal_lexicographically)
- typedef R_ R;
- typedef typename Get_type<R, Bool_tag>::type result_type;
- typedef typename Get_functor<R, Compare_lexicographically_tag>::type CL;
- typedef typename CGAL::Is_exact<CL> Is_exact;
-
- template <class V, class W>
- result_type operator() (V const&a, W const&b) const {
- CL c (this->kernel());
- return c(a,b) <= 0;
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Less_or_equal_lexicographically_tag,(CartesianDKernelFunctors::Less_or_equal_lexicographically<K>),(),(Compare_lexicographically_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Equal_points : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Equal_points)
- typedef R_ R;
- typedef typename Get_type<R, Bool_tag>::type result_type;
- typedef typename Get_functor<R, Construct_ttag<Point_cartesian_const_iterator_tag> >::type CI;
- // TODO: This is_exact thing should be reengineered.
- // the goal is to have a way to tell: don't filter this
- typedef typename CGAL::Is_exact<CI> Is_exact;
-
- template<class V,class W>
- result_type operator()(V const&a, W const&b)const{
- CI c(this->kernel());
-#ifdef CGAL_CXX11
- auto
-#else
- typename CI::result_type
-#endif
- a_begin=c(a,Begin_tag()),
- b_begin=c(b,Begin_tag()),
- a_end=c(a,End_tag());
- result_type res = true;
- // Is using CGAL::possibly for Uncertain really an optimization?
- do res = res & (*a_begin++ == *b_begin++);
- while(a_begin!=a_end && possibly(res));
- return res;
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Equal_points_tag,(CartesianDKernelFunctors::Equal_points<K>),(),(Construct_ttag<Point_cartesian_const_iterator_tag>));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Oriented_side : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Oriented_side)
- typedef R_ R;
- typedef typename Get_type<R, Oriented_side_tag>::type result_type;
- typedef typename Get_type<R, Point_tag>::type Point;
- typedef typename Get_type<R, Hyperplane_tag>::type Hyperplane;
- typedef typename Get_type<R, Sphere_tag>::type Sphere;
- typedef typename Get_functor<R, Value_at_tag>::type VA;
- typedef typename Get_functor<R, Hyperplane_translation_tag>::type HT;
- typedef typename Get_functor<R, Squared_distance_tag>::type SD;
- typedef typename Get_functor<R, Squared_radius_tag>::type SR;
- typedef typename Get_functor<R, Center_of_sphere_tag>::type CS;
-
- result_type operator()(Hyperplane const&h, Point const&p)const{
- HT ht(this->kernel());
- VA va(this->kernel());
- return CGAL::compare(va(h,p),ht(h));
- }
- result_type operator()(Sphere const&s, Point const&p)const{
- SD sd(this->kernel());
- SR sr(this->kernel());
- CS cs(this->kernel());
- return CGAL::compare(sd(cs(s),p),sr(s));
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Oriented_side_tag,(CartesianDKernelFunctors::Oriented_side<K>),(Point_tag,Sphere_tag,Hyperplane_tag),(Value_at_tag,Hyperplane_translation_tag,Squared_distance_tag,Squared_radius_tag,Center_of_sphere_tag));
-
-namespace CartesianDKernelFunctors {
-template<class R_> struct Has_on_positive_side : private Store_kernel<R_> {
- CGAL_FUNCTOR_INIT_STORE(Has_on_positive_side)
- typedef R_ R;
- typedef typename Get_type<R, Bool_tag>::type result_type;
- typedef typename Get_functor<R, Oriented_side_tag>::type OS;
-
- template <class Obj, class Pt>
- result_type operator()(Obj const&o, Pt const&p)const{
- OS os(this->kernel());
- return os(o,p) == ON_POSITIVE_SIDE;
- }
-};
-}
-
-CGAL_KD_DEFAULT_FUNCTOR(Has_on_positive_side_tag,(CartesianDKernelFunctors::Has_on_positive_side<K>),(),(Oriented_side_tag));
-
-}
-#include <CGAL/NewKernel_d/Coaffine.h>
-#endif // CGAL_KERNEL_D_FUNCTION_OBJECTS_CARTESIAN_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/functor_properties.h b/include/gudhi_patches/CGAL/NewKernel_d/functor_properties.h
deleted file mode 100644
index c25c4e2b..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/functor_properties.h
+++ /dev/null
@@ -1,40 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_EXACTNESS_H
-#define CGAL_EXACTNESS_H
-#include <boost/mpl/has_xxx.hpp>
-#include <CGAL/tags.h>
-namespace CGAL {
-
-#define CGAL_STRAWBERRY(Is_pretty) \
- namespace internal { \
- BOOST_MPL_HAS_XXX_TRAIT_DEF(Is_pretty) \
- } \
- template<class T,bool=internal::has_##Is_pretty<T>::value> \
- struct Is_pretty : boost::false_type {}; \
- template<class T> \
- struct Is_pretty<T,true> : T::Is_pretty {}
-
-CGAL_STRAWBERRY(Is_exact);
-CGAL_STRAWBERRY(Is_fast);
-CGAL_STRAWBERRY(Is_stored);
-#undef CGAL_STRAWBERRY
-}
-#endif // CGAL_EXACTNESS_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/functor_tags.h b/include/gudhi_patches/CGAL/NewKernel_d/functor_tags.h
deleted file mode 100644
index b8e17886..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/functor_tags.h
+++ /dev/null
@@ -1,363 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_FUNCTOR_TAGS_H
-#define CGAL_FUNCTOR_TAGS_H
-#include <CGAL/tags.h> // for Null_tag
-#include <CGAL/NewKernel_d/utils.h>
-#ifdef CGAL_CXX11
-#include <type_traits>
-#include <utility>
-#endif
-#include <boost/type_traits.hpp>
-#include <boost/mpl/has_xxx.hpp>
-#include <boost/mpl/not.hpp>
-#include <boost/mpl/if.hpp>
-#include <boost/mpl/vector.hpp>
-#include <boost/mpl/empty.hpp>
-#include <boost/mpl/front.hpp>
-#include <boost/mpl/pop_front.hpp>
-namespace CGAL {
-
- // Find a better place for this later
-
- template <class K, class T, class=void> struct Get_type
- : K::template Type<T> {};
- template <class K, class F, class O=void, class=void> struct Get_functor
- : K::template Functor<F, O> {};
-#ifdef CGAL_CXX11
- template <class K, class T> using Type = typename Get_type<K, T>::type;
- template <class K, class T> using Functor = typename Get_functor<K, T>::type;
-#endif
-
- class Null_type {~Null_type();}; // no such object should be created
-
- // To construct iterators
- struct Begin_tag {};
- struct End_tag {};
-
- // Functor category
- struct Predicate_tag {};
- struct Construct_tag {};
- struct Construct_iterator_tag {};
- struct Compute_tag {};
- struct Misc_tag {};
-
- struct No_filter_tag {};
-
- template<class>struct Construct_ttag {};
- template<class>struct Convert_ttag {};
-
- template <class K, class F, class=void, class=void> struct Get_functor_category { typedef Misc_tag type; };
- template<class Tg, class Obj, class Base> struct Typedef_tag_type;
- //template<class Kernel, class Tg> struct Read_tag_type {};
-
- template<class Kernel, class Tg>
- struct Provides_type
- : Has_type_different_from<Get_type<Kernel, Tg>, Null_type> {};
-
- template<class Kernel, class Tg, class O=void>
- struct Provides_functor
- : Has_type_different_from<Get_functor<Kernel, Tg, O>, Null_functor> {};
-
- template<class K, class List, bool=boost::mpl::empty<List>::type::value>
- struct Provides_functors : boost::mpl::and_ <
- Provides_functor<K, typename boost::mpl::front<List>::type>,
- Provides_functors<K, typename boost::mpl::pop_front<List>::type> > {};
- template<class K, class List>
- struct Provides_functors<K, List, true> : boost::true_type {};
-
- template<class K, class List, bool=boost::mpl::empty<List>::type::value>
- struct Provides_types : boost::mpl::and_ <
- Provides_type<K, typename boost::mpl::front<List>::type>,
- Provides_types<K, typename boost::mpl::pop_front<List>::type> > {};
- template<class K, class List>
- struct Provides_types<K, List, true> : boost::true_type {};
-
- namespace internal { BOOST_MPL_HAS_XXX_TRAIT_NAMED_DEF(has_Type,template Type<Null_tag>,false) }
- template<class Kernel, class Tg,
- bool = internal::has_Type<Kernel>::value /* false */>
- struct Provides_type_i : boost::false_type {};
- template<class Kernel, class Tg>
- struct Provides_type_i <Kernel, Tg, true>
- : Has_type_different_from<typename Kernel::template Type<Tg>, Null_type> {};
-
- //// This version does not like Functor<T,bool=false>
- //namespace internal { BOOST_MPL_HAS_XXX_TEMPLATE_NAMED_DEF(has_Functor,Functor,false) }
- // This version lets us use non-type template parameters, but fails with older EDG-based compilers (Intel 14).
- namespace internal { BOOST_MPL_HAS_XXX_TRAIT_NAMED_DEF(has_Functor,template Functor<Null_tag>,false) }
-
- template<class Kernel, class Tg, class O=void,
- bool = internal::has_Functor<Kernel>::value /* false */>
- struct Provides_functor_i : boost::false_type {};
- template<class Kernel, class Tg, class O>
- struct Provides_functor_i <Kernel, Tg, O, true>
- : Has_type_different_from<typename Kernel::template Functor<Tg, O>, Null_functor> {};
-
- // TODO: Refine this a bit.
- template <class K, class T, class D=void,
- //bool=Provides_functor<K,T>::value,
- //bool=Provides_functor_i<K,T>::value,
- bool = internal::has_Functor<K>::value
- >
- struct Inherit_functor : K::template Functor<T> {};
- template <class K, class T, class D>
- struct Inherit_functor <K, T, D, false> {};
-
- template <class K, class T, bool=internal::has_Type<K>::value>
- struct Inherit_type : K::template Type<T> {};
- template <class K, class T>
- struct Inherit_type <K, T, false> {};
-
- struct Number_tag {};
- struct Discrete_tag {};
- struct Object_tag {};
- template <class K, class T, class=void> struct Get_type_category {
- // The lazy kernel uses it too eagerly,
- // so it currently needs a default.
- typedef Null_tag type;
- };
-
-#define CGAL_DECL_OBJ_(X,Y) \
- template<class Obj,class Base> \
- struct Typedef_tag_type<X##_tag, Obj, Base> : Base { typedef Obj X; }; \
- template<class K, class D> \
- struct Get_type_category <K, X##_tag, D> { typedef Y##_tag type; }
-#define CGAL_DECL_OBJ(X,Y) struct X##_tag {}; \
- CGAL_DECL_OBJ_(X,Y)
-
- //namespace has_object { BOOST_MPL_HAS_XXX_TRAIT_DEF(X) }
- //template<class Kernel>
- //struct Provides_tag_type<Kernel, X##_tag> : has_object::has_##X<Kernel> {};
- //template<class Kernel>
- //struct Read_tag_type<Kernel, X##_tag> { typedef typename Kernel::X type; }
-
- // Not exactly objects, but the extras can't hurt.
- CGAL_DECL_OBJ(FT, Number);
- CGAL_DECL_OBJ(RT, Number);
-
- CGAL_DECL_OBJ(Bool, Discrete); // Boolean_tag is already taken, and is a template :-(
- CGAL_DECL_OBJ(Comparison_result, Discrete);
- CGAL_DECL_OBJ(Sign, Discrete);
- CGAL_DECL_OBJ(Orientation, Discrete); // Note: duplicate with the functor tag!
- CGAL_DECL_OBJ(Oriented_side, Discrete);
- CGAL_DECL_OBJ(Bounded_side, Discrete);
- CGAL_DECL_OBJ(Angle, Discrete);
- CGAL_DECL_OBJ(Flat_orientation, Discrete);
-
- CGAL_DECL_OBJ(Vector, Object);
- CGAL_DECL_OBJ(Point, Object);
- CGAL_DECL_OBJ(Segment, Object);
- CGAL_DECL_OBJ(Sphere, Object);
- CGAL_DECL_OBJ(Line, Object);
- CGAL_DECL_OBJ(Direction, Object);
- CGAL_DECL_OBJ(Hyperplane, Object);
- CGAL_DECL_OBJ(Ray, Object);
- CGAL_DECL_OBJ(Iso_box, Object);
- CGAL_DECL_OBJ(Bbox, Object);
- CGAL_DECL_OBJ(Aff_transformation, Object);
- CGAL_DECL_OBJ(Weighted_point, Object);
-#undef CGAL_DECL_OBJ_
-#undef CGAL_DECL_OBJ
-
-// Intel fails with those, and they are not so useful.
-// CGAL_KD_DEFAULT_TYPE(RT_tag,(typename Get_type<K, FT_tag>::type),(),());
-// CGAL_KD_DEFAULT_TYPE(FT_tag,(CGAL::Quotient<typename Get_type<K, RT_tag>::type>),(),());
-
-#define CGAL_SMURF2(A,B) CGAL_KD_DEFAULT_TYPE(A##_tag,(typename Same_uncertainty_nt<B, typename Get_type<K,RT_tag>::type>::type),(RT_tag),())
-#define CGAL_SMURF1(A) CGAL_SMURF2(A,CGAL::A)
- CGAL_SMURF2(Bool, bool);
- CGAL_SMURF1(Sign);
- CGAL_SMURF1(Comparison_result);
- CGAL_SMURF1(Orientation);
- CGAL_SMURF1(Oriented_side);
- CGAL_SMURF1(Bounded_side);
- CGAL_SMURF1(Angle);
-#undef CGAL_SMURF1
-#undef CGAL_SMURF2
-
- // TODO: replace with Get_type_category
- template<class> struct is_NT_tag { enum { value = false }; };
- template<> struct is_NT_tag<FT_tag> { enum { value = true }; };
- template<> struct is_NT_tag<RT_tag> { enum { value = true }; };
-
- template<class> struct iterator_tag_traits {
- enum { is_iterator = false, has_nth_element = false };
- typedef Null_tag value_tag;
- };
-
-#define CGAL_DECL_COMPUTE(X) struct X##_tag {}; \
- template<class A,class B,class C>struct Get_functor_category<A,X##_tag,B,C>{typedef Compute_tag type;}
- CGAL_DECL_COMPUTE(Compute_point_cartesian_coordinate);
- CGAL_DECL_COMPUTE(Compute_vector_cartesian_coordinate);
- CGAL_DECL_COMPUTE(Compute_homogeneous_coordinate);
- CGAL_DECL_COMPUTE(Squared_distance);
- CGAL_DECL_COMPUTE(Squared_distance_to_origin);
- CGAL_DECL_COMPUTE(Squared_length);
- CGAL_DECL_COMPUTE(Squared_radius);
- CGAL_DECL_COMPUTE(Squared_circumradius);
- CGAL_DECL_COMPUTE(Scalar_product);
- CGAL_DECL_COMPUTE(Hyperplane_translation);
- CGAL_DECL_COMPUTE(Value_at);
- CGAL_DECL_COMPUTE(Point_weight);
- CGAL_DECL_COMPUTE(Power_distance);
- CGAL_DECL_COMPUTE(Power_distance_to_point);
-#undef CGAL_DECL_COMPUTE
-
-#define CGAL_DECL_ITER_OBJ(X,Y,Z,C) struct X##_tag {}; \
- template<>struct iterator_tag_traits<X##_tag> { \
- enum { is_iterator = true, has_nth_element = true }; \
- typedef Y##_tag value_tag; \
- typedef Z##_tag nth_element; \
- typedef C##_tag container; \
- }; \
- template<class Obj,class Base> \
- struct Typedef_tag_type<X##_tag, Obj, Base> : Base { typedef Obj X; }
-
- //namespace has_object { BOOST_MPL_HAS_XXX_TRAIT_DEF(X) }
- //template<class Kernel>
- //struct Provides_tag_type<Kernel, X##_tag> : has_object::has_##X<Kernel> {};
- //template<class Kernel>
- //struct Read_tag_type<Kernel, X##_tag> { typedef typename Kernel::X type; }
-
- CGAL_DECL_ITER_OBJ(Vector_cartesian_const_iterator, FT, Compute_vector_cartesian_coordinate, Vector);
- CGAL_DECL_ITER_OBJ(Point_cartesian_const_iterator, FT, Compute_point_cartesian_coordinate, Point);
-#undef CGAL_DECL_ITER_OBJ
-
- template<class>struct map_result_tag{typedef Null_type type;};
- template<class T>struct map_result_tag<Construct_ttag<T> >{typedef T type;};
-
- template<class A,class T,class B,class C>struct Get_functor_category<A,Construct_ttag<T>,B,C> :
- boost::mpl::if_c<iterator_tag_traits<T>::is_iterator,
- Construct_iterator_tag,
- Construct_tag> {};
-
- // Really?
- template<class A,class T,class B,class C>struct Get_functor_category<A,Convert_ttag<T>,B,C>{typedef Misc_tag type;};
-
-#define CGAL_DECL_CONSTRUCT(X,Y) struct X##_tag {}; \
- template<>struct map_result_tag<X##_tag>{typedef Y##_tag type;}; \
- template<class A,class B,class C>struct Get_functor_category<A,X##_tag,B,C>{typedef Construct_tag type;}
- CGAL_DECL_CONSTRUCT(Midpoint,Point);
- CGAL_DECL_CONSTRUCT(Center_of_sphere,Point);
- CGAL_DECL_CONSTRUCT(Point_of_sphere,Point);
- CGAL_DECL_CONSTRUCT(Segment_extremity,Point);
- CGAL_DECL_CONSTRUCT(Sum_of_vectors,Vector);
- CGAL_DECL_CONSTRUCT(Difference_of_vectors,Vector);
- CGAL_DECL_CONSTRUCT(Opposite_vector,Vector);
- CGAL_DECL_CONSTRUCT(Scaled_vector,Vector);
- CGAL_DECL_CONSTRUCT(Orthogonal_vector,Vector);
- CGAL_DECL_CONSTRUCT(Difference_of_points,Vector);
- CGAL_DECL_CONSTRUCT(Translated_point,Point);
- CGAL_DECL_CONSTRUCT(Point_to_vector,Vector);
- CGAL_DECL_CONSTRUCT(Vector_to_point,Point);
- CGAL_DECL_CONSTRUCT(Construct_min_vertex,Point);
- CGAL_DECL_CONSTRUCT(Construct_max_vertex,Point);
- CGAL_DECL_CONSTRUCT(Construct_circumcenter,Point);
- CGAL_DECL_CONSTRUCT(Point_drop_weight,Point);
- CGAL_DECL_CONSTRUCT(Power_center,Weighted_point);
-#undef CGAL_DECL_CONSTRUCT
-#if 0
-#define CGAL_DECL_ITER_CONSTRUCT(X,Y) struct X##_tag {}; \
- template<>struct map_result_tag<X##_tag>{typedef Y##_tag type;}; \
- template<>struct map_functor_type<X##_tag>{typedef Construct_iterator_tag type;}
- CGAL_DECL_ITER_CONSTRUCT(Construct_point_cartesian_const_iterator,Point_cartesian_const_iterator);
- CGAL_DECL_ITER_CONSTRUCT(Construct_vector_cartesian_const_iterator,Vector_cartesian_const_iterator);
-#undef CGAL_DECL_ITER_CONSTRUCT
-#endif
-
- //FIXME: choose a convention: prefix with Predicate_ ?
-#define CGAL_DECL_PREDICATE_(X) \
- template<class A,class B,class C>struct Get_functor_category<A,X##_tag,B,C>{typedef Predicate_tag type;}
-#define CGAL_DECL_PREDICATE(X) struct X##_tag {}; \
- CGAL_DECL_PREDICATE_(X)
- CGAL_DECL_PREDICATE(Less_point_cartesian_coordinate);
- CGAL_DECL_PREDICATE(Compare_point_cartesian_coordinate);
- CGAL_DECL_PREDICATE(Compare_distance);
- CGAL_DECL_PREDICATE(Compare_lexicographically);
- CGAL_DECL_PREDICATE(Less_lexicographically);
- CGAL_DECL_PREDICATE(Less_or_equal_lexicographically);
- CGAL_DECL_PREDICATE(Equal_points);
- CGAL_DECL_PREDICATE(Has_on_positive_side);
- CGAL_DECL_PREDICATE_(Orientation); // duplicate with the type
- CGAL_DECL_PREDICATE_(Oriented_side); // duplicate with the type
- CGAL_DECL_PREDICATE(Orientation_of_points);
- CGAL_DECL_PREDICATE(Orientation_of_vectors);
- CGAL_DECL_PREDICATE(Side_of_oriented_sphere);
- CGAL_DECL_PREDICATE(Side_of_bounded_sphere);
- CGAL_DECL_PREDICATE(Side_of_bounded_circumsphere);
- CGAL_DECL_PREDICATE(Contained_in_affine_hull);
- CGAL_DECL_PREDICATE(In_flat_orientation);
- CGAL_DECL_PREDICATE(In_flat_side_of_oriented_sphere);
- CGAL_DECL_PREDICATE(Construct_flat_orientation); // Making it a predicate is a questionable choice, it should be possible to let it be a construction for some implementations. Not sure how to do that... TODO
- CGAL_DECL_PREDICATE(Linear_rank);
- CGAL_DECL_PREDICATE(Affine_rank);
- CGAL_DECL_PREDICATE(Linearly_independent);
- CGAL_DECL_PREDICATE(Affinely_independent);
- CGAL_DECL_PREDICATE(Contained_in_linear_hull);
- CGAL_DECL_PREDICATE(Contained_in_simplex);
- CGAL_DECL_PREDICATE(Power_side_of_power_sphere_raw);
- CGAL_DECL_PREDICATE(Power_side_of_power_sphere);
- CGAL_DECL_PREDICATE(In_flat_power_side_of_power_sphere_raw);
- CGAL_DECL_PREDICATE(In_flat_power_side_of_power_sphere);
-#undef CGAL_DECL_PREDICATE
-
-#define CGAL_DECL_MISC(X) struct X##_tag {}; \
- template<class A,class B,class C>struct Get_functor_category<A,X##_tag,B,C>{typedef Misc_tag type;}
- //TODO: split into _begin and _end ?
- //CGAL_DECL_MISC(Construct_point_cartesian_const_iterator);
- //CGAL_DECL_MISC(Construct_vector_cartesian_const_iterator);
- CGAL_DECL_MISC(Point_dimension);
- CGAL_DECL_MISC(Vector_dimension);
- CGAL_DECL_MISC(Linear_base); // Find a more appropriate category?
-#undef CGAL_DECL_MISC
-
-
- // Properties for LA
- struct Has_extra_dimension_tag {};
- struct Has_vector_plus_minus_tag {};
- struct Has_vector_scalar_ops_tag {};
- struct Has_dot_product_tag {};
- struct Has_determinant_of_vectors_tag {};
- struct Has_determinant_of_points_tag {};
- struct Has_determinant_of_iterator_to_vectors_tag {};
- struct Has_determinant_of_iterator_to_points_tag {};
- struct Has_determinant_of_vectors_omit_last_tag {};
- struct Stores_squared_norm_tag {};
-
- template<class> struct Preserved_by_non_linear_extra_coordinate
- : boost::false_type {};
- template<> struct Preserved_by_non_linear_extra_coordinate
- <Has_extra_dimension_tag> : boost::true_type {};
- template<> struct Preserved_by_non_linear_extra_coordinate
- <Has_determinant_of_vectors_tag> : boost::true_type {};
- template<> struct Preserved_by_non_linear_extra_coordinate
- <Has_determinant_of_points_tag> : boost::true_type {};
- template<> struct Preserved_by_non_linear_extra_coordinate
- <Has_determinant_of_iterator_to_vectors_tag> : boost::true_type {};
- template<> struct Preserved_by_non_linear_extra_coordinate
- <Has_determinant_of_iterator_to_points_tag> : boost::true_type {};
- template<> struct Preserved_by_non_linear_extra_coordinate
- <Has_determinant_of_vectors_omit_last_tag> : boost::true_type {};
-
- // Kernel properties
- struct Point_stores_squared_distance_to_origin_tag {};
-
-}
-#endif // CGAL_FUNCTOR_TAGS_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/static_int.h b/include/gudhi_patches/CGAL/NewKernel_d/static_int.h
deleted file mode 100644
index 21858804..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/static_int.h
+++ /dev/null
@@ -1,61 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_STATIC_INT_H
-#define CGAL_STATIC_INT_H
-#include <CGAL/constant.h>
-
-namespace CGAL {
-template <class NT> struct static_zero {
- operator NT() const { return constant<NT,0>(); }
-};
-template <class NT> struct static_one {
- operator NT() const { return constant<NT,1>(); }
-};
-
-template <class NT> static_zero<NT> operator-(static_zero<NT>) { return static_zero<NT>(); }
-
-template <class NT> NT operator+(NT const& x, static_zero<NT>) { return x; }
-template <class NT> NT operator+(static_zero<NT>, NT const& x) { return x; }
-template <class NT> static_zero<NT> operator+(static_zero<NT>, static_zero<NT>) { return static_zero<NT>(); }
-template <class NT> static_one<NT> operator+(static_zero<NT>, static_one<NT>) { return static_one<NT>(); }
-template <class NT> static_one<NT> operator+(static_one<NT>, static_zero<NT>) { return static_one<NT>(); }
-
-template <class NT> NT operator-(NT const& x, static_zero<NT>) { return x; }
-template <class NT> NT operator-(static_zero<NT>, NT const& x) { return -x; }
-template <class NT> static_zero<NT> operator-(static_zero<NT>, static_zero<NT>) { return static_zero<NT>(); }
-template <class NT> static_zero<NT> operator-(static_one<NT>, static_one<NT>) { return static_zero<NT>(); }
-template <class NT> static_one<NT> operator-(static_one<NT>, static_zero<NT>) { return static_one<NT>(); }
-
-template <class NT> NT operator*(NT const& x, static_one<NT>) { return x; }
-template <class NT> NT operator*(static_one<NT>, NT const& x) { return x; }
-template <class NT> static_zero<NT> operator*(NT const&, static_zero<NT>) { return static_zero<NT>(); }
-template <class NT> static_zero<NT> operator*(static_zero<NT>, NT const&) { return static_zero<NT>(); }
-template <class NT> static_zero<NT> operator*(static_zero<NT>, static_zero<NT>) { return static_zero<NT>(); }
-template <class NT> static_one<NT> operator*(static_one<NT>, static_one<NT>) { return static_one<NT>(); }
-template <class NT> static_zero<NT> operator*(static_zero<NT>, static_one<NT>) { return static_zero<NT>(); }
-template <class NT> static_zero<NT> operator*(static_one<NT>, static_zero<NT>) { return static_zero<NT>(); }
-
-template <class NT> NT operator/(NT const& x, static_one<NT>) { return x; }
-template <class NT> static_zero<NT> operator/(static_zero<NT>, NT const&) { return static_zero<NT>(); }
-template <class NT> static_zero<NT> operator/(static_zero<NT>, static_one<NT>) { return static_zero<NT>(); }
-template <class NT> static_one<NT> operator/(static_one<NT>, static_one<NT>) { return static_one<NT>(); }
-
-}
-#endif // CGAL_STATIC_INT_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/store_kernel.h b/include/gudhi_patches/CGAL/NewKernel_d/store_kernel.h
deleted file mode 100644
index 253e1282..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/store_kernel.h
+++ /dev/null
@@ -1,104 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_STORE_KERNEL_H
-#define CGAL_STORE_KERNEL_H
-
-#include <CGAL/assertions.h>
-#include <boost/type_traits/is_empty.hpp>
-
-namespace CGAL {
-namespace internal {
-BOOST_MPL_HAS_XXX_TRAIT_DEF(Do_not_store_kernel)
-template<class T,bool=boost::is_empty<T>::value,bool=has_Do_not_store_kernel<T>::value> struct Do_not_store_kernel {
- enum { value=false };
- typedef Tag_false type;
-};
-template<class T> struct Do_not_store_kernel<T,true,false> {
- enum { value=true };
- typedef Tag_true type;
-};
-template<class T,bool b> struct Do_not_store_kernel<T,b,true> {
- typedef typename T::Do_not_store_kernel type;
- enum { value=type::value };
-};
-}
-
-template<class R_,bool=internal::Do_not_store_kernel<R_>::value>
-struct Store_kernel {
- Store_kernel(){}
- Store_kernel(R_ const&){}
- enum { kernel_is_stored = false };
- R_ kernel()const{return R_();}
- typedef R_ reference_type;
- void set_kernel(R_ const&){}
-};
-template<class R_>
-struct Store_kernel<R_,false> {
- Store_kernel():rp(0){
- CGAL_warning_msg(true,"I should know my kernel");
- }
- Store_kernel(R_ const& r):rp(&r){}
- enum { kernel_is_stored = true };
- R_ const& kernel()const{
- CGAL_warning_msg(rp!=0,"I should know my kernel");
- return *rp;
- }
- typedef R_ const& reference_type;
- void set_kernel(R_ const&r){rp=&r;}
- private:
- R_ const* rp;
-};
-
-//For a second kernel. TODO: find something more elegant
-template<class R_,bool=internal::Do_not_store_kernel<R_>::value>
-struct Store_kernel2 {
- Store_kernel2(){}
- Store_kernel2(R_ const&){}
- enum { kernel2_is_stored = false };
- R_ kernel2()const{return R_();}
- typedef R_ reference2_type;
- void set_kernel2(R_ const&){}
-};
-template<class R_>
-struct Store_kernel2<R_,false> {
- Store_kernel2(){
- //CGAL_warning_msg(true,"I should know my kernel");
- }
- Store_kernel2(R_ const& r):rp(&r){}
- enum { kernel2_is_stored = true };
- R_ const& kernel2()const{
- CGAL_warning_msg(rp==0,"I should know my kernel");
- return *rp;
- }
- typedef R_ const& reference2_type;
- void set_kernel2(R_ const&r){rp=&r;}
- private:
- R_ const* rp;
-};
-}
-#define CGAL_BASE_INIT(X,Y) \
- X():Y(){} \
- X(R_ const&r):Y(r){}
-#define CGAL_FUNCTOR_INIT_STORE(X) CGAL_BASE_INIT(X,Store_kernel<R_>)
-#define CGAL_FUNCTOR_INIT_IGNORE(X) \
- X(){} \
- X(R_ const&){}
-
-#endif // CGAL_STORE_KERNEL_H
diff --git a/include/gudhi_patches/CGAL/NewKernel_d/utils.h b/include/gudhi_patches/CGAL/NewKernel_d/utils.h
deleted file mode 100644
index 238a2230..00000000
--- a/include/gudhi_patches/CGAL/NewKernel_d/utils.h
+++ /dev/null
@@ -1,306 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_MARCUTILS
-#define CGAL_MARCUTILS
-
-#include <CGAL/config.h>
-
-#if defined(BOOST_MSVC)
-# pragma warning(push)
-# pragma warning(disable:4003) // not enough actual parameters for macro 'BOOST_PP_EXPAND_I'
- // http://lists.boost.org/boost-users/2014/11/83291.php
-#endif
-
-#ifdef CGAL_CXX11
-#include <type_traits>
-#include <utility>
-#define CGAL_FORWARDABLE(T) T&&
-#define CGAL_FORWARD(T,t) std::forward<T>(t)
-#define CGAL_MOVE(t) std::move(t)
-#define CGAL_CONSTEXPR constexpr
-#else
-#define CGAL_FORWARDABLE(T) T const&
-#define CGAL_FORWARD(T,t) t
-#define CGAL_MOVE(t) t
-#define CGAL_CONSTEXPR
-#endif
-#include <boost/utility/enable_if.hpp>
-#include <boost/preprocessor/repetition.hpp>
-#include <CGAL/Rational_traits.h>
-#include <CGAL/tuple.h>
-#include <boost/mpl/has_xxx.hpp>
-#include <boost/mpl/not.hpp>
-#include <boost/type_traits.hpp>
-
-#ifdef CGAL_CXX11
-#define CGAL_BOOSTD std::
-#else
-#define CGAL_BOOSTD boost::
-#endif
-
-namespace CGAL {
-namespace internal {
- BOOST_MPL_HAS_XXX_TRAIT_DEF(type)
-}
-
-template <class T, class No, bool=internal::has_type<T>::value /*false*/>
-struct Has_type_different_from : boost::false_type {};
-template <class T, class No>
-struct Has_type_different_from <T, No, true>
-: boost::mpl::not_<boost::is_same<typename T::type, No> > {};
-
-
- template <class T> struct Wrap_type { typedef T type; };
-
- // tell a function f(a,b,c) that its real argument is a(b,c)
- struct Eval_functor {};
-
- // forget the first argument. Useful to make something dependant
- // (and thus usable in SFINAE), although that's not a great design.
- template<class A,class B> struct Second_arg {
- typedef B type;
- };
-
- // like std::forward, except for basic types where it does a cast, to
- // avoid issues with narrowing conversions
-#ifdef CGAL_CXX11
- template<class T,class U,class V> inline
- typename std::conditional<std::is_arithmetic<T>::value&&std::is_arithmetic<typename std::remove_reference<U>::type>::value,T,U&&>::type
- forward_safe(V&& u) { return std::forward<U>(u); }
-#else
- template<class T,class U> inline U const& forward_safe(U const& u) {
- return u;
- }
-#endif
-
-#ifdef CGAL_CXX11
- template<class...> struct Constructible_from_each;
- template<class To,class From1,class...From> struct Constructible_from_each<To,From1,From...>{
- enum { value=std::is_convertible<From1,To>::value&&Constructible_from_each<To,From...>::value };
- };
- template<class To> struct Constructible_from_each<To>{
- enum { value=true };
- };
-#else
-// currently only used in C++0X code
-#endif
-
- template<class T> struct Scale {
-#ifndef CGAL_CXX11
- template<class> struct result;
- template<class FT> struct result<Scale(FT)> {
- typedef FT type;
- };
-#endif
- T const& scale;
- Scale(T const& t):scale(t){}
- template<class FT>
-#ifdef CGAL_CXX11
- auto operator()(FT&& x)const->decltype(scale*std::forward<FT>(x))
-#else
- FT operator()(FT const& x)const
-#endif
- {
- return scale*CGAL_FORWARD(FT,x);
- }
- };
- template<class NT,class T> struct Divide {
-#if !defined(CGAL_CXX11) || !defined(BOOST_RESULT_OF_USE_DECLTYPE)
- // requires boost > 1.44
- // shouldn't be needed with C++0X
- //template<class> struct result;
- //template<class FT> struct result<Divide(FT)> {
- // typedef FT type;
- //};
- typedef NT result_type;
-#endif
- T const& scale;
- Divide(T const& t):scale(t){}
- template<class FT>
-#ifdef CGAL_CXX11
- //FIXME: gcc complains for Gmpq
- //auto operator()(FT&& x)const->decltype(Rational_traits<NT>().make_rational(std::forward<FT>(x),scale))
- NT operator()(FT&& x)const
-#else
- NT operator()(FT const& x)const
-#endif
- {
- return Rational_traits<NT>().
- make_rational(CGAL_FORWARD(FT,x),scale);
- }
- };
-
- template <class NT> struct has_cheap_constructor : boost::is_arithmetic<NT>{};
- template <bool p> struct has_cheap_constructor<Interval_nt<p> > {
- enum { value=true };
- };
-
- // like std::multiplies but allows mixing types
- // in C++11 in doesn't need to be a template
- template < class Ret >
- struct multiplies {
- template<class A,class B>
-#ifdef CGAL_CXX11
- auto operator()(A&&a,B&&b)const->decltype(std::forward<A>(a)*std::forward<B>(b))
-#else
- Ret operator()(A const& a, B const& b)const
-#endif
- {
- return CGAL_FORWARD(A,a)*CGAL_FORWARD(B,b);
- }
- };
- template < class Ret >
- struct division {
- template<class A,class B>
-#ifdef CGAL_CXX11
- auto operator()(A&&a,B&&b)const->decltype(std::forward<A>(a)/std::forward<B>(b))
-#else
- Ret operator()(A const& a, B const& b)const
-#endif
- {
- return CGAL_FORWARD(A,a)/CGAL_FORWARD(B,b);
- }
- };
-
-#ifdef CGAL_CXX11
- using std::decay;
-#else
- template<class T> struct decay : boost::remove_cv<typename boost::decay<T>::type> {};
-#endif
-
- template<class T,class U> struct Type_copy_ref { typedef U type; };
- template<class T,class U> struct Type_copy_ref<T&,U> { typedef U& type; };
-#ifdef CGAL_CXX11
- template<class T,class U> struct Type_copy_ref<T&&,U> { typedef U&& type; };
-#endif
- template<class T,class U> struct Type_copy_cv { typedef U type; };
- template<class T,class U> struct Type_copy_cv<T const,U> { typedef U const type; };
- template<class T,class U> struct Type_copy_cv<T volatile,U> { typedef U volatile type; };
- template<class T,class U> struct Type_copy_cv<T const volatile,U> { typedef U const volatile type; };
-
- template<class T,class U> struct Type_copy_cvref :
- Type_copy_ref<T,typename Type_copy_cv<typename boost::remove_reference<T>::type,U>::type> {};
-
- struct Dereference_functor {
- template<class> struct result{};
- template<class It> struct result<Dereference_functor(It)> {
- typedef typename std::iterator_traits<It>::reference type;
- };
- template<class It> typename result<Dereference_functor(It)>::type
- operator()(It const&i)const{
- return *i;
- }
- };
-
-#ifdef CGAL_CXX11
- template<int...> struct Indices{};
- template<class> struct Next_increasing_indices;
- template<int...I> struct Next_increasing_indices<Indices<I...> > {
- typedef Indices<I...,sizeof...(I)> type;
- };
- template<int N> struct N_increasing_indices {
- typedef typename Next_increasing_indices<typename N_increasing_indices<N-1>::type>::type type;
- };
- template<> struct N_increasing_indices<0> { typedef Indices<> type; };
- namespace internal {
- template<class F,class...U,int...I> inline typename std::result_of<F&&(U...)>::type
- do_call_on_tuple_elements(F&&f, std::tuple<U...>&&t, Indices<I...>&&) {
- return f(std::get<I>(std::move(t))...);
- }
- } // internal
- template<class/*result type, ignored*/,class F,class...U>
- inline typename std::result_of<F&&(U...)>::type
- call_on_tuple_elements(F&&f, std::tuple<U...>&&t) {
- return internal::do_call_on_tuple_elements(std::forward<F>(f),std::move(t),
- typename N_increasing_indices<sizeof...(U)>::type());
- }
-#else
-#define CGAL_VAR(Z,N,_) cpp0x::get<N>(t)
-#define CGAL_CODE(Z,N,_) template<class Res, class F BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_PARAMS(N,class U)> \
- inline Res call_on_tuple_elements(F const&f, \
- cpp0x::tuple<BOOST_PP_ENUM_PARAMS(N,U)> const&t) { \
- return f(BOOST_PP_ENUM(N,CGAL_VAR,)); \
- }
- template<class Res, class F>
- inline Res call_on_tuple_elements(F const&f, cpp0x::tuple<>) {
- return f();
- }
-BOOST_PP_REPEAT_FROM_TO(1, 8, CGAL_CODE, _ )
-#undef CGAL_CODE
-#undef CGAL_VAR
-#endif
-
- template<class A> struct Factory {
- typedef A result_type;
-#ifdef CGAL_CXX11
- template<class...U> result_type operator()(U&&...u)const{
- return A(std::forward<U>(u)...);
- }
-#else
- result_type operator()()const{
- return A();
- }
-#define CGAL_CODE(Z,N,_) template<BOOST_PP_ENUM_PARAMS(N,class U)> \
- result_type operator()(BOOST_PP_ENUM_BINARY_PARAMS(N,U,const&u))const{ \
- return A(BOOST_PP_ENUM_PARAMS(N,u)); \
- }
-BOOST_PP_REPEAT_FROM_TO(1, 8, CGAL_CODE, _ )
-#undef CGAL_CODE
-#endif
- };
-}
-
-// TODO: make a Cartesian-only variant
-// WARNING: do not use the Req* parameters too much, they can cause circular instanciations and are only useful for dispatching.
-#define CGAL_STRIP_PAREN_(...) __VA_ARGS__
-#define CGAL_STRIP_PAREN(...) CGAL_STRIP_PAREN_ __VA_ARGS__
-// What to do with O? pass it down to other functors or drop it?
-#define CGAL_KD_DEFAULT_FUNCTOR(Tg,Name,ReqTyp,ReqFun) \
- template <class K, class O> \
- struct Get_functor<K, Tg, O, \
- typename boost::mpl::if_c< \
- Provides_functor_i<K, Tg, O>::value \
- || !Provides_types<K, boost::mpl::vector<CGAL_STRIP_PAREN_ ReqTyp> >::value \
- || !Provides_functors<K, boost::mpl::vector<CGAL_STRIP_PAREN_ ReqFun> >::value \
- , int, void>::type> \
- { \
- typedef CGAL_STRIP_PAREN_ Name type; \
- typedef K Bound_kernel; \
- }
-
-// Not used yet, may need some changes.
-#define CGAL_KD_DEFAULT_TYPE(Tg,Name,ReqTyp,ReqFun) \
- template <class K> \
- struct Get_type<K, Tg, \
- typename boost::mpl::if_c< \
- Provides_type_i<K, Tg>::value \
- || !Provides_types<K, boost::mpl::vector<CGAL_STRIP_PAREN_ ReqTyp> >::value \
- || !Provides_functors<K, boost::mpl::vector<CGAL_STRIP_PAREN_ ReqFun> >::value \
- , int, void>::type> \
- { \
- typedef CGAL_STRIP_PAREN_ Name type; \
- typedef K Bound_kernel; \
- }
-
-#if defined(BOOST_MSVC)
-# pragma warning(pop)
-#endif
-
-#endif
diff --git a/include/gudhi_patches/CGAL/Orthogonal_incremental_neighbor_search.h b/include/gudhi_patches/CGAL/Orthogonal_incremental_neighbor_search.h
deleted file mode 100644
index e29ce14f..00000000
--- a/include/gudhi_patches/CGAL/Orthogonal_incremental_neighbor_search.h
+++ /dev/null
@@ -1,620 +0,0 @@
-// Copyright (c) 2002,2011 Utrecht University (The Netherlands).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-//
-// Author(s) : Hans Tangelder (<hanst@cs.uu.nl>)
-
-#ifndef CGAL_ORTHOGONAL_INCREMENTAL_NEIGHBOR_SEARCH
-#define CGAL_ORTHOGONAL_INCREMENTAL_NEIGHBOR_SEARCH
-
-#include <CGAL/Kd_tree.h>
-#include <cstring>
-#include <list>
-#include <queue>
-#include <memory>
-#include <CGAL/Euclidean_distance.h>
-#include <CGAL/tuple.h>
-
-namespace CGAL {
-
- template <class SearchTraits,
- class Distance_= typename internal::Spatial_searching_default_distance<SearchTraits>::type,
- class Splitter_ = Sliding_midpoint<SearchTraits>,
- class Tree_= Kd_tree<SearchTraits, Splitter_, Tag_true> >
- class Orthogonal_incremental_neighbor_search {
-
- public:
- typedef Splitter_ Splitter;
- typedef Tree_ Tree;
- typedef Distance_ Distance;
- typedef typename SearchTraits::Point_d Point_d;
- typedef typename Distance::Query_item Query_item;
- typedef typename SearchTraits::FT FT;
- typedef typename Tree::Point_d_iterator Point_d_iterator;
- typedef typename Tree::Node_const_handle Node_const_handle;
-
- typedef std::pair<Point_d,FT> Point_with_transformed_distance;
- typedef CGAL::cpp11::tuple<Node_const_handle,FT,std::vector<FT> > Node_with_distance;
- typedef std::vector<Node_with_distance*> Node_with_distance_vector;
- typedef std::vector<Point_with_transformed_distance*> Point_with_transformed_distance_vector;
-
- template<class T>
- struct Object_wrapper
- {
- T object;
- Object_wrapper(const T& t):object(t){}
- const T& operator* () const { return object; }
- const T* operator-> () const { return &object; }
- };
-
- class Iterator_implementation {
- SearchTraits traits;
- public:
-
- int number_of_neighbours_computed;
- int number_of_internal_nodes_visited;
- int number_of_leaf_nodes_visited;
- int number_of_items_visited;
-
- private:
-
- typedef std::vector<FT> Distance_vector;
-
- Distance_vector dists;
-
- Distance Orthogonal_distance_instance;
-
- FT multiplication_factor;
-
- Query_item query_point;
-
- FT distance_to_root;
-
- bool search_nearest_neighbour;
-
- FT rd;
-
-
- class Priority_higher {
- public:
-
- bool search_nearest;
-
- Priority_higher(bool search_the_nearest_neighbour)
- : search_nearest(search_the_nearest_neighbour)
- {}
-
- //highest priority is smallest distance
- bool
- operator() (Node_with_distance* n1, Node_with_distance* n2) const
- {
- return (search_nearest) ? (CGAL::cpp11::get<1>(*n1) > CGAL::cpp11::get<1>(*n2)) : (CGAL::cpp11::get<1>(*n2) > CGAL::cpp11::get<1>(*n1));
- }
- };
-
- class Distance_smaller {
-
- public:
-
- bool search_nearest;
-
- Distance_smaller(bool search_the_nearest_neighbour)
- : search_nearest(search_the_nearest_neighbour)
- {}
-
- //highest priority is smallest distance
- bool operator() (Point_with_transformed_distance* p1, Point_with_transformed_distance* p2) const
- {
- return (search_nearest) ? (p1->second > p2->second) : (p2->second > p1->second);
- }
- };
-
-
- std::priority_queue<Node_with_distance*, Node_with_distance_vector,
- Priority_higher> PriorityQueue;
-
- public:
- std::priority_queue<Point_with_transformed_distance*, Point_with_transformed_distance_vector,
- Distance_smaller> Item_PriorityQueue;
-
-
- public:
-
- int reference_count;
-
-
-
- // constructor
- Iterator_implementation(const Tree& tree,const Query_item& q, const Distance& tr,
- FT Eps=FT(0.0), bool search_nearest=true)
- : traits(tree.traits()),number_of_neighbours_computed(0), number_of_internal_nodes_visited(0),
- number_of_leaf_nodes_visited(0), number_of_items_visited(0),
- Orthogonal_distance_instance(tr), multiplication_factor(Orthogonal_distance_instance.transformed_distance(FT(1.0)+Eps)),
- query_point(q), search_nearest_neighbour(search_nearest),
- PriorityQueue(Priority_higher(search_nearest)), Item_PriorityQueue(Distance_smaller(search_nearest)),
- reference_count(1)
-
-
- {
- if (tree.empty()) return;
-
- typename SearchTraits::Construct_cartesian_const_iterator_d ccci=traits.construct_cartesian_const_iterator_d_object();
- int dim = static_cast<int>(std::distance(ccci(q), ccci(q,0)));
-
- dists.resize(dim);
- for(int i=0 ; i<dim ; ++i){
- dists[i] = 0;
- }
-
- if (search_nearest){
- distance_to_root=
- Orthogonal_distance_instance.min_distance_to_rectangle(q, tree.bounding_box(),dists);
- Node_with_distance *The_Root = new Node_with_distance(tree.root(),
- distance_to_root, dists);
- PriorityQueue.push(The_Root);
-
- // rd is the distance of the top of the priority queue to q
- rd=CGAL::cpp11::get<1>(*The_Root);
- Compute_the_next_nearest_neighbour();
- }
- else{
- distance_to_root=
- Orthogonal_distance_instance.max_distance_to_rectangle(q,
- tree.bounding_box(), dists);
- Node_with_distance *The_Root = new Node_with_distance(tree.root(),
- distance_to_root, dists);
- PriorityQueue.push(The_Root);
-
- // rd is the distance of the top of the priority queue to q
- rd=CGAL::cpp11::get<1>(*The_Root);
- Compute_the_next_furthest_neighbour();
- }
-
-
- }
-
- // * operator
- const Point_with_transformed_distance&
- operator* () const
- {
- return *(Item_PriorityQueue.top());
- }
-
- // prefix operator
- Iterator_implementation&
- operator++()
- {
- Delete_the_current_item_top();
- if(search_nearest_neighbour)
- Compute_the_next_nearest_neighbour();
- else
- Compute_the_next_furthest_neighbour();
- return *this;
- }
-
- // postfix operator
- Object_wrapper<Point_with_transformed_distance>
- operator++(int)
- {
- Object_wrapper<Point_with_transformed_distance> result( *(Item_PriorityQueue.top()) );
- ++*this;
- return result;
- }
-
- // Print statistics of the general priority search process.
- std::ostream&
- statistics (std::ostream& s) const {
- s << "Orthogonal priority search statistics:"
- << std::endl;
- s << "Number of internal nodes visited:"
- << number_of_internal_nodes_visited << std::endl;
- s << "Number of leaf nodes visited:"
- << number_of_leaf_nodes_visited << std::endl;
- s << "Number of items visited:"
- << number_of_items_visited << std::endl;
- s << "Number of neighbours computed:"
- << number_of_neighbours_computed << std::endl;
- return s;
- }
-
-
- //destructor
- ~Iterator_implementation()
- {
- while (!PriorityQueue.empty()) {
- Node_with_distance* The_top=PriorityQueue.top();
- PriorityQueue.pop();
- delete The_top;
- }
- while (!Item_PriorityQueue.empty()) {
- Point_with_transformed_distance* The_top=Item_PriorityQueue.top();
- Item_PriorityQueue.pop();
- delete The_top;
- }
- }
-
- private:
-
- void
- Delete_the_current_item_top()
- {
- Point_with_transformed_distance* The_item_top=Item_PriorityQueue.top();
- Item_PriorityQueue.pop();
- delete The_item_top;
- }
-
- void
- Compute_the_next_nearest_neighbour()
- {
- // compute the next item
- bool next_neighbour_found=false;
- if (!(Item_PriorityQueue.empty())) {
- next_neighbour_found=
- (multiplication_factor*rd > Item_PriorityQueue.top()->second);
- }
- typename SearchTraits::Construct_cartesian_const_iterator_d construct_it=traits.construct_cartesian_const_iterator_d_object();
- typename SearchTraits::Cartesian_const_iterator_d query_point_it = construct_it(query_point);
- // otherwise browse the tree further
- while ((!next_neighbour_found) && (!PriorityQueue.empty())) {
- Node_with_distance* The_node_top=PriorityQueue.top();
- Node_const_handle N= CGAL::cpp11::get<0>(*The_node_top);
- dists = CGAL::cpp11::get<2>(*The_node_top);
- PriorityQueue.pop();
- delete The_node_top;
- FT copy_rd=rd;
- while (!(N->is_leaf())) { // compute new distance
- typename Tree::Internal_node_const_handle node =
- static_cast<typename Tree::Internal_node_const_handle>(N);
- number_of_internal_nodes_visited++;
- int new_cut_dim=node->cutting_dimension();
- FT new_rd,dst = dists[new_cut_dim];
- FT val = *(query_point_it + new_cut_dim);
- FT diff1 = val - node->upper_low_value();
- FT diff2 = val - node->lower_high_value();
- if (diff1 + diff2 < FT(0.0)) {
- new_rd=
- Orthogonal_distance_instance.new_distance(copy_rd,dst,diff1,new_cut_dim);
-
- CGAL_assertion(new_rd >= copy_rd);
- dists[new_cut_dim] = diff1;
- Node_with_distance *Upper_Child =
- new Node_with_distance(node->upper(), new_rd, dists);
- PriorityQueue.push(Upper_Child);
- dists[new_cut_dim] = dst;
- N=node->lower();
-
- }
- else { // compute new distance
- new_rd=Orthogonal_distance_instance.new_distance(copy_rd,dst,diff2,new_cut_dim);
- CGAL_assertion(new_rd >= copy_rd);
- dists[new_cut_dim] = diff2;
- Node_with_distance *Lower_Child =
- new Node_with_distance(node->lower(), new_rd, dists);
- PriorityQueue.push(Lower_Child);
- dists[new_cut_dim] = dst;
- N=node->upper();
- }
- }
- // n is a leaf
- typename Tree::Leaf_node_const_handle node =
- static_cast<typename Tree::Leaf_node_const_handle>(N);
- number_of_leaf_nodes_visited++;
- if (node->size() > 0) {
- for (typename Tree::iterator it=node->begin(); it != node->end(); it++) {
- number_of_items_visited++;
- FT distance_to_query_point=
- Orthogonal_distance_instance.transformed_distance(query_point,*it);
- Point_with_transformed_distance *NN_Candidate=
- new Point_with_transformed_distance(*it,distance_to_query_point);
- Item_PriorityQueue.push(NN_Candidate);
- }
- // old top of PriorityQueue has been processed,
- // hence update rd
-
- if (!(PriorityQueue.empty())) {
- rd = CGAL::cpp11::get<1>(*PriorityQueue.top());
- next_neighbour_found =
- (multiplication_factor*rd >
- Item_PriorityQueue.top()->second);
- }
- else // priority queue empty => last neighbour found
- {
- next_neighbour_found=true;
- }
-
- number_of_neighbours_computed++;
- }
- } // next_neighbour_found or priority queue is empty
- // in the latter case also the item priority quee is empty
- }
-
-
- void
- Compute_the_next_furthest_neighbour()
- {
- // compute the next item
- bool next_neighbour_found=false;
- if (!(Item_PriorityQueue.empty())) {
- next_neighbour_found=
- (rd < multiplication_factor*Item_PriorityQueue.top()->second);
- }
- typename SearchTraits::Construct_cartesian_const_iterator_d construct_it=traits.construct_cartesian_const_iterator_d_object();
- typename SearchTraits::Cartesian_const_iterator_d query_point_it = construct_it(query_point);
- // otherwise browse the tree further
- while ((!next_neighbour_found) && (!PriorityQueue.empty())) {
- Node_with_distance* The_node_top=PriorityQueue.top();
- Node_const_handle N= CGAL::cpp11::get<0>(*The_node_top);
- dists = CGAL::cpp11::get<2>(*The_node_top);
- PriorityQueue.pop();
- delete The_node_top;
- FT copy_rd=rd;
- while (!(N->is_leaf())) { // compute new distance
- typename Tree::Internal_node_const_handle node =
- static_cast<typename Tree::Internal_node_const_handle>(N);
- number_of_internal_nodes_visited++;
- int new_cut_dim=node->cutting_dimension();
- FT new_rd,dst = dists[new_cut_dim];
- FT val = *(query_point_it + new_cut_dim);
- FT diff1 = val - node->upper_low_value();
- FT diff2 = val - node->lower_high_value();
- if (diff1 + diff2 < FT(0.0)) {
- diff1 = val - node->upper_high_value();
- new_rd=
- Orthogonal_distance_instance.new_distance(copy_rd,dst,diff1,new_cut_dim);
- Node_with_distance *Lower_Child =
- new Node_with_distance(node->lower(), copy_rd, dists);
- PriorityQueue.push(Lower_Child);
- N=node->upper();
- dists[new_cut_dim] = diff1;
- copy_rd=new_rd;
-
- }
- else { // compute new distance
- diff2 = val - node->lower_low_value();
- new_rd=Orthogonal_distance_instance.new_distance(copy_rd,dst,diff2,new_cut_dim);
- Node_with_distance *Upper_Child =
- new Node_with_distance(node->upper(), copy_rd, dists);
- PriorityQueue.push(Upper_Child);
- N=node->lower();
- dists[new_cut_dim] = diff2;
- copy_rd=new_rd;
- }
- }
- // n is a leaf
- typename Tree::Leaf_node_const_handle node =
- static_cast<typename Tree::Leaf_node_const_handle>(N);
- number_of_leaf_nodes_visited++;
- if (node->size() > 0) {
- for (typename Tree::iterator it=node->begin(); it != node->end(); it++) {
- number_of_items_visited++;
- FT distance_to_query_point=
- Orthogonal_distance_instance.transformed_distance(query_point,*it);
- Point_with_transformed_distance *NN_Candidate=
- new Point_with_transformed_distance(*it,distance_to_query_point);
- Item_PriorityQueue.push(NN_Candidate);
- }
- // old top of PriorityQueue has been processed,
- // hence update rd
-
- if (!(PriorityQueue.empty())) {
- rd = CGAL::cpp11::get<1>(*PriorityQueue.top());
- next_neighbour_found =
- (multiplication_factor*rd <
- Item_PriorityQueue.top()->second);
- }
- else // priority queue empty => last neighbour found
- {
- next_neighbour_found=true;
- }
-
- number_of_neighbours_computed++;
- }
- } // next_neighbour_found or priority queue is empty
- // in the latter case also the item priority quee is empty
- }
- }; // class Iterator_implementaion
-
-
-
-
-
-
-
-
-
- public:
- class iterator;
- typedef iterator const_iterator;
-
- // constructor
- Orthogonal_incremental_neighbor_search(const Tree& tree,
- const Query_item& q, FT Eps = FT(0.0),
- bool search_nearest=true, const Distance& tr=Distance())
- : m_tree(tree),m_query(q),m_dist(tr),m_Eps(Eps),m_search_nearest(search_nearest)
- {}
-
- iterator
- begin() const
- {
- return iterator(m_tree,m_query,m_dist,m_Eps,m_search_nearest);
- }
-
- iterator
- end() const
- {
- return iterator();
- }
-
- std::ostream&
- statistics(std::ostream& s)
- {
- begin()->statistics(s);
- return s;
- }
-
-
-
-
- class iterator {
-
- public:
-
- typedef std::input_iterator_tag iterator_category;
- typedef Point_with_transformed_distance value_type;
- typedef Point_with_transformed_distance* pointer;
- typedef const Point_with_transformed_distance& reference;
- typedef std::size_t size_type;
- typedef std::ptrdiff_t difference_type;
- typedef int distance_type;
-
- //class Iterator_implementation;
- Iterator_implementation *Ptr_implementation;
-
-
- public:
-
- // default constructor
- iterator()
- : Ptr_implementation(0)
- {}
-
- int
- the_number_of_items_visited()
- {
- return Ptr_implementation->number_of_items_visited;
- }
-
- // constructor
- iterator(const Tree& tree,const Query_item& q, const Distance& tr=Distance(), FT eps=FT(0.0),
- bool search_nearest=true)
- : Ptr_implementation(new Iterator_implementation(tree, q, tr, eps, search_nearest))
- {}
-
- // copy constructor
- iterator(const iterator& Iter)
- {
- Ptr_implementation = Iter.Ptr_implementation;
- if (Ptr_implementation != 0) Ptr_implementation->reference_count++;
- }
-
- iterator& operator=(const iterator& Iter)
- {
- if (Ptr_implementation != Iter.Ptr_implementation){
- if (Ptr_implementation != 0 && --(Ptr_implementation->reference_count)==0) {
- delete Ptr_implementation;
- }
- Ptr_implementation = Iter.Ptr_implementation;
- if (Ptr_implementation != 0) Ptr_implementation->reference_count++;
- }
- return *this;
- }
-
-
- const Point_with_transformed_distance&
- operator* () const
- {
- return *(*Ptr_implementation);
- }
-
- // -> operator
- const Point_with_transformed_distance*
- operator-> () const
- {
- return &*(*Ptr_implementation);
- }
-
- // prefix operator
- iterator&
- operator++()
- {
- ++(*Ptr_implementation);
- return *this;
- }
-
- // postfix operator
- Object_wrapper<Point_with_transformed_distance>
- operator++(int)
- {
- return (*Ptr_implementation)++;
- }
-
-
- bool
- operator==(const iterator& It) const
- {
- if (
- ((Ptr_implementation == 0) ||
- Ptr_implementation->Item_PriorityQueue.empty()) &&
- ((It.Ptr_implementation == 0) ||
- It.Ptr_implementation->Item_PriorityQueue.empty())
- )
- return true;
- // else
- return (Ptr_implementation == It.Ptr_implementation);
- }
-
- bool
- operator!=(const iterator& It) const
- {
- return !(*this == It);
- }
-
- std::ostream&
- statistics (std::ostream& s)
- {
- Ptr_implementation->statistics(s);
- return s;
- }
-
- ~iterator()
- {
- if (Ptr_implementation != 0) {
- Ptr_implementation->reference_count--;
- if (Ptr_implementation->reference_count==0) {
- delete Ptr_implementation;
- Ptr_implementation = 0;
- }
- }
- }
-
-
- }; // class iterator
-
- //data members
- const Tree& m_tree;
- Query_item m_query;
- Distance m_dist;
- FT m_Eps;
- bool m_search_nearest;
- }; // class
-
- template <class Traits, class Query_item, class Distance>
- void swap (typename Orthogonal_incremental_neighbor_search<Traits,
- Query_item, Distance>::iterator& x,
- typename Orthogonal_incremental_neighbor_search<Traits,
- Query_item, Distance>::iterator& y)
- {
- typename Orthogonal_incremental_neighbor_search<Traits,
- Query_item, Distance>::iterator::Iterator_implementation
- *tmp = x.Ptr_implementation;
- x.Ptr_implementation = y.Ptr_implementation;
- y.Ptr_implementation = tmp;
- }
-
-} // namespace CGAL
-
-#endif // CGAL_ORTHOGONAL_INCREMENTAL_NEIGHBOR_SEARCH_H
diff --git a/include/gudhi_patches/CGAL/Regular_triangulation.h b/include/gudhi_patches/CGAL/Regular_triangulation.h
deleted file mode 100644
index 111c6ac9..00000000
--- a/include/gudhi_patches/CGAL/Regular_triangulation.h
+++ /dev/null
@@ -1,1169 +0,0 @@
-// Copyright (c) 2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Clement Jamin
-
-#ifndef CGAL_REGULAR_TRIANGULATION_H
-#define CGAL_REGULAR_TRIANGULATION_H
-
-#include <CGAL/Triangulation.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/Default.h>
-#include <CGAL/spatial_sort.h>
-#include <CGAL/Regular_triangulation_traits_adapter.h>
-
-#include <boost/property_map/function_property_map.hpp>
-
-namespace CGAL {
-
-template< typename Traits_, typename TDS_ = Default >
-class Regular_triangulation
-: public Triangulation<
- Regular_triangulation_traits_adapter<Traits_>,
- typename Default::Get<
- TDS_,
- Triangulation_data_structure<
- typename Regular_triangulation_traits_adapter<Traits_>::Dimension,
- Triangulation_vertex<Regular_triangulation_traits_adapter<Traits_> >,
- Triangulation_full_cell<Regular_triangulation_traits_adapter<Traits_> >
- >
- >::type>
-{
- typedef Regular_triangulation_traits_adapter<Traits_> RTTraits;
- typedef typename RTTraits::Dimension Maximal_dimension_;
- typedef typename Default::Get<
- TDS_,
- Triangulation_data_structure<
- Maximal_dimension_,
- Triangulation_vertex<RTTraits>,
- Triangulation_full_cell<RTTraits>
- > >::type TDS;
- typedef Triangulation<RTTraits, TDS> Base;
- typedef Regular_triangulation<Traits_, TDS_> Self;
-
- typedef typename RTTraits::Orientation_d Orientation_d;
- typedef typename RTTraits::Power_side_of_power_sphere_d Power_side_of_power_sphere_d;
- typedef typename RTTraits::In_flat_power_side_of_power_sphere_d
- In_flat_power_side_of_power_sphere_d;
- typedef typename RTTraits::Flat_orientation_d Flat_orientation_d;
- typedef typename RTTraits::Construct_flat_orientation_d Construct_flat_orientation_d;
-
-public: // PUBLIC NESTED TYPES
-
- typedef RTTraits Geom_traits;
- typedef typename Base::Triangulation_ds Triangulation_ds;
-
- typedef typename Base::Vertex Vertex;
- typedef typename Base::Full_cell Full_cell;
- typedef typename Base::Facet Facet;
- typedef typename Base::Face Face;
-
- typedef Maximal_dimension_ Maximal_dimension;
- typedef typename RTTraits::Bare_point_d Bare_point;
- typedef typename RTTraits::Weighted_point_d Weighted_point;
-
- typedef typename Base::Point_const_iterator Point_const_iterator;
- typedef typename Base::Vertex_handle Vertex_handle;
- typedef typename Base::Vertex_iterator Vertex_iterator;
- typedef typename Base::Vertex_const_handle Vertex_const_handle;
- typedef typename Base::Vertex_const_iterator Vertex_const_iterator;
-
- typedef typename Base::Full_cell_handle Full_cell_handle;
- typedef typename Base::Full_cell_iterator Full_cell_iterator;
- typedef typename Base::Full_cell_const_handle Full_cell_const_handle;
- typedef typename Base::Full_cell_const_iterator Full_cell_const_iterator;
- typedef typename Base::Finite_full_cell_const_iterator
- Finite_full_cell_const_iterator;
-
- typedef typename Base::size_type size_type;
- typedef typename Base::difference_type difference_type;
-
- typedef typename Base::Locate_type Locate_type;
-
- //Tag to distinguish Delaunay from Regular triangulations
- typedef Tag_true Weighted_tag;
-
-protected: // DATA MEMBERS
-
-
-public:
-
- using typename Base::Rotor;
- using Base::maximal_dimension;
- using Base::are_incident_full_cells_valid;
- using Base::coaffine_orientation_predicate;
- using Base::reset_flat_orientation;
- using Base::current_dimension;
- using Base::geom_traits;
- using Base::index_of_covertex;
- //using Base::index_of_second_covertex;
- using Base::rotate_rotor;
- using Base::infinite_vertex;
- using Base::insert_in_hole;
- using Base::is_infinite;
- using Base::locate;
- using Base::points_begin;
- using Base::set_neighbors;
- using Base::new_full_cell;
- using Base::number_of_vertices;
- using Base::orientation;
- using Base::tds;
- using Base::reorient_full_cells;
- using Base::full_cell;
- using Base::full_cells_begin;
- using Base::full_cells_end;
- using Base::finite_full_cells_begin;
- using Base::finite_full_cells_end;
- using Base::vertices_begin;
- using Base::vertices_end;
-
-private:
-
- // Wrapper
- struct Power_side_of_power_sphere_for_non_maximal_dim_d
- {
- boost::optional<Flat_orientation_d>* fop;
- Construct_flat_orientation_d cfo;
- In_flat_power_side_of_power_sphere_d ifpt;
-
- Power_side_of_power_sphere_for_non_maximal_dim_d(
- boost::optional<Flat_orientation_d>& x,
- Construct_flat_orientation_d const&y,
- In_flat_power_side_of_power_sphere_d const&z)
- : fop(&x), cfo(y), ifpt(z) {}
-
- template<class Iter>
- CGAL::Orientation operator()(Iter a, Iter b, const Weighted_point & p)const
- {
- if(!*fop)
- *fop=cfo(a,b);
- return ifpt(fop->get(),a,b,p);
- }
- };
-
-public:
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - CREATION / CONSTRUCTORS
-
- Regular_triangulation(int dim, const Geom_traits &k = Geom_traits())
- : Base(dim, k)
- {
- }
-
- // With this constructor,
- // the user can specify a Flat_orientation_d object to be used for
- // orienting simplices of a specific dimension
- // (= preset_flat_orientation_.first)
- // It it used by the dark triangulations created by DT::remove
- Regular_triangulation(
- int dim,
- const std::pair<int, const Flat_orientation_d *> &preset_flat_orientation,
- const Geom_traits &k = Geom_traits())
- : Base(dim, preset_flat_orientation, k)
- {
- }
-
- ~Regular_triangulation() {}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ACCESS
-
- // Not Documented
- Power_side_of_power_sphere_for_non_maximal_dim_d power_side_of_power_sphere_for_non_maximal_dim_predicate() const
- {
- return Power_side_of_power_sphere_for_non_maximal_dim_d (
- flat_orientation_,
- geom_traits().construct_flat_orientation_d_object(),
- geom_traits().in_flat_power_side_of_power_sphere_d_object()
- );
- }
-
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - REMOVALS
-
- // Warning: these functions are not correct since they do not restore hidden
- // vertices
-
- Full_cell_handle remove(Vertex_handle);
- Full_cell_handle remove(const Weighted_point & p, Full_cell_handle hint = Full_cell_handle())
- {
- Locate_type lt;
- Face f(maximal_dimension());
- Facet ft;
- Full_cell_handle s = locate(p, lt, f, ft, hint);
- if( Base::ON_VERTEX == lt )
- {
- return remove(s->vertex(f.index(0)));
- }
- return Full_cell_handle();
- }
-
- template< typename ForwardIterator >
- void remove(ForwardIterator start, ForwardIterator end)
- {
- while( start != end )
- remove(*start++);
- }
-
- // Not documented
- void remove_decrease_dimension(Vertex_handle);
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - INSERTIONS
-
- template< typename ForwardIterator >
- std::ptrdiff_t insert(ForwardIterator start, ForwardIterator end)
- {
- size_type n = number_of_vertices();
- typedef std::vector<Weighted_point> WP_vec;
- WP_vec points(start, end);
-
- spatial_sort(points.begin(), points.end(), geom_traits());
-
- Full_cell_handle hint;
- for(typename WP_vec::const_iterator p = points.begin(); p != points.end(); ++p )
- {
- Locate_type lt;
- Face f(maximal_dimension());
- Facet ft;
- Full_cell_handle c = locate (*p, lt, f, ft, hint);
- Vertex_handle v = insert (*p, lt, f, ft, c);
-
- hint = v == Vertex_handle() ? c : v->full_cell();
- }
- return number_of_vertices() - n;
- }
-
- Vertex_handle insert(const Weighted_point &,
- Locate_type,
- const Face &,
- const Facet &,
- Full_cell_handle);
-
- Vertex_handle insert(const Weighted_point & p,
- Full_cell_handle start = Full_cell_handle())
- {
- Locate_type lt;
- Face f(maximal_dimension());
- Facet ft;
- Full_cell_handle s = locate(p, lt, f, ft, start);
- return insert(p, lt, f, ft, s);
- }
-
- Vertex_handle insert(const Weighted_point & p, Vertex_handle hint)
- {
- CGAL_assertion( Vertex_handle() != hint );
- return insert(p, hint->full_cell());
- }
-
- Vertex_handle insert_outside_affine_hull(const Weighted_point &);
- Vertex_handle insert_in_conflicting_cell(
- const Weighted_point &, Full_cell_handle,
- Vertex_handle only_if_this_vertex_is_in_the_cz = Vertex_handle());
-
- Vertex_handle insert_if_in_star(const Weighted_point &,
- Vertex_handle,
- Locate_type,
- const Face &,
- const Facet &,
- Full_cell_handle);
-
- Vertex_handle insert_if_in_star(
- const Weighted_point & p, Vertex_handle star_center,
- Full_cell_handle start = Full_cell_handle())
- {
- Locate_type lt;
- Face f(maximal_dimension());
- Facet ft;
- Full_cell_handle s = locate(p, lt, f, ft, start);
- return insert_if_in_star(p, star_center, lt, f, ft, s);
- }
-
- Vertex_handle insert_if_in_star(
- const Weighted_point & p, Vertex_handle star_center,
- Vertex_handle hint)
- {
- CGAL_assertion( Vertex_handle() != hint );
- return insert_if_in_star(p, star_center, hint->full_cell());
- }
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - GATHERING CONFLICTING SIMPLICES
-
- bool is_in_conflict(const Weighted_point &, Full_cell_const_handle) const;
-
- template< class OrientationPredicate >
- Oriented_side perturbed_power_side_of_power_sphere(const Weighted_point &,
- Full_cell_const_handle, const OrientationPredicate &) const;
-
- template< typename OutputIterator >
- Facet compute_conflict_zone(const Weighted_point &, Full_cell_handle, OutputIterator) const;
-
- template < typename OrientationPredicate, typename PowerTestPredicate >
- class Conflict_predicate
- {
- const Self & rt_;
- const Weighted_point & p_;
- OrientationPredicate ori_;
- PowerTestPredicate power_side_of_power_sphere_;
- int cur_dim_;
- public:
- Conflict_predicate(
- const Self & rt,
- const Weighted_point & p,
- const OrientationPredicate & ori,
- const PowerTestPredicate & power_side_of_power_sphere)
- : rt_(rt), p_(p), ori_(ori), power_side_of_power_sphere_(power_side_of_power_sphere), cur_dim_(rt.current_dimension()) {}
-
- inline
- bool operator()(Full_cell_const_handle s) const
- {
- bool ok;
- if( ! rt_.is_infinite(s) )
- {
- Oriented_side power_side_of_power_sphere = power_side_of_power_sphere_(rt_.points_begin(s), rt_.points_begin(s) + cur_dim_ + 1, p_);
- if( ON_POSITIVE_SIDE == power_side_of_power_sphere )
- ok = true;
- else if( ON_NEGATIVE_SIDE == power_side_of_power_sphere )
- ok = false;
- else
- ok = ON_POSITIVE_SIDE == rt_.perturbed_power_side_of_power_sphere<OrientationPredicate>(p_, s, ori_);
- }
- else
- {
- typedef typename Full_cell::Vertex_handle_const_iterator VHCI;
- typedef Substitute_point_in_vertex_iterator<VHCI> F;
- F spivi(rt_.infinite_vertex(), &p_);
-
- Orientation o = ori_(
- boost::make_transform_iterator(s->vertices_begin(), spivi),
- boost::make_transform_iterator(s->vertices_begin() + cur_dim_ + 1,
- spivi));
-
- if( POSITIVE == o )
- ok = true;
- else if( o == NEGATIVE )
- ok = false;
- else
- ok = (*this)(s->neighbor( s->index( rt_.infinite_vertex() ) ));
- }
- return ok;
- }
- };
-
- template < typename ConflictPredicate >
- class Conflict_traversal_predicate
- {
- const Self & rt_;
- const ConflictPredicate & pred_;
- public:
- Conflict_traversal_predicate(const Self & rt, const ConflictPredicate & pred)
- : rt_(rt), pred_(pred)
- {}
- inline
- bool operator()(const Facet & f) const
- {
- return pred_(rt_.full_cell(f)->neighbor(rt_.index_of_covertex(f)));
- }
- };
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - VALIDITY
-
- bool is_valid(bool verbose = false, int level = 0) const;
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - MISC
-
- std::size_t number_of_hidden_vertices() const
- {
- return m_hidden_points.size();
- }
-
-private:
-
- template<typename InputIterator>
- bool
- does_cell_range_contain_vertex(InputIterator cz_begin, InputIterator cz_end,
- Vertex_handle vh) const
- {
- // Check all vertices
- while(cz_begin != cz_end)
- {
- Full_cell_handle fch = *cz_begin;
- for (int i = 0 ; i <= current_dimension() ; ++i)
- {
- if (fch->vertex(i) == vh)
- return true;
- }
- ++cz_begin;
- }
- return false;
- }
-
- template<typename InputIterator, typename OutputIterator>
- void
- process_conflict_zone(InputIterator cz_begin, InputIterator cz_end,
- OutputIterator vertices_out) const
- {
- // Get all vertices
- while(cz_begin != cz_end)
- {
- Full_cell_handle fch = *cz_begin;
- for (int i = 0 ; i <= current_dimension() ; ++i)
- {
- Vertex_handle vh = fch->vertex(i);
- if (vh->full_cell() != Full_cell_handle())
- {
- (*vertices_out++) = vh;
- vh->set_full_cell(Full_cell_handle());
- }
- }
- ++cz_begin;
- }
- }
-
-
- template<typename InputIterator>
- void
- process_cz_vertices_after_insertion(InputIterator vertices_begin,
- InputIterator vertices_end)
- {
- // Get all vertices
- while(vertices_begin != vertices_end)
- {
- Vertex_handle vh = *vertices_begin;
- if (vh->full_cell() == Full_cell_handle())
- {
- m_hidden_points.push_back(vh->point());
- tds().delete_vertex(vh);
- }
- ++vertices_begin;
- }
- }
-
-private:
- // Some internal types to shorten notation
- using typename Base::Coaffine_orientation_d;
- using Base::flat_orientation_;
- typedef Conflict_predicate<Coaffine_orientation_d, Power_side_of_power_sphere_for_non_maximal_dim_d>
- Conflict_pred_in_subspace;
- typedef Conflict_predicate<Orientation_d, Power_side_of_power_sphere_d>
- Conflict_pred_in_fullspace;
- typedef Conflict_traversal_predicate<Conflict_pred_in_subspace>
- Conflict_traversal_pred_in_subspace;
- typedef Conflict_traversal_predicate<Conflict_pred_in_fullspace>
- Conflict_traversal_pred_in_fullspace;
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - MEMBER VARIABLES
- std::vector<Weighted_point> m_hidden_points;
-
-}; // class Regular_triangulation
-
-
-// = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
-// FUNCTIONS THAT ARE MEMBER METHODS:
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - REMOVALS
-
-
-// Warning: this function is not correct since it does not restore hidden
-// vertices
-template< typename Traits, typename TDS >
-typename Regular_triangulation<Traits, TDS>::Full_cell_handle
-Regular_triangulation<Traits, TDS>
-::remove( Vertex_handle v )
-{
- CGAL_precondition( ! is_infinite(v) );
- CGAL_expensive_precondition( is_vertex(v) );
-
- // THE CASE cur_dim == 0
- if( 0 == current_dimension() )
- {
- remove_decrease_dimension(v);
- return Full_cell_handle();
- }
- else if( 1 == current_dimension() )
- { // THE CASE cur_dim == 1
- if( 2 == number_of_vertices() )
- {
- remove_decrease_dimension(v);
- return Full_cell_handle();
- }
- Full_cell_handle left = v->full_cell();
- if( 0 == left->index(v) )
- left = left->neighbor(1);
- CGAL_assertion( 1 == left->index(v) );
- Full_cell_handle right = left->neighbor(0);
- tds().associate_vertex_with_full_cell(left, 1, right->vertex(1));
- set_neighbors(left, 0, right->neighbor(0), right->mirror_index(0));
- tds().delete_vertex(v);
- tds().delete_full_cell(right);
- return left;
- }
-
- // THE CASE cur_dim >= 2
- // Gather the finite vertices sharing an edge with |v|
- typedef typename Base::template Full_cell_set<Full_cell_handle> Simplices;
- Simplices simps;
- std::back_insert_iterator<Simplices> out(simps);
- tds().incident_full_cells(v, out);
- typedef std::set<Vertex_handle> Vertex_set;
- Vertex_set verts;
- Vertex_handle vh;
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- for( int i = 0; i <= current_dimension(); ++i )
- {
- vh = (*it)->vertex(i);
- if( is_infinite(vh) )
- continue;
- if( vh == v )
- continue;
- verts.insert(vh);
- }
-
- // After gathering finite neighboring vertices, create their Dark Delaunay triangulation
- typedef Triangulation_vertex<Geom_traits, Vertex_handle> Dark_vertex_base;
- typedef Triangulation_full_cell<
- Geom_traits,
- internal::Triangulation::Dark_full_cell_data<TDS> > Dark_full_cell_base;
- typedef Triangulation_data_structure<Maximal_dimension,
- Dark_vertex_base,
- Dark_full_cell_base
- > Dark_tds;
- typedef Regular_triangulation<Traits, Dark_tds> Dark_triangulation;
- typedef typename Dark_triangulation::Face Dark_face;
- typedef typename Dark_triangulation::Facet Dark_facet;
- typedef typename Dark_triangulation::Vertex_handle Dark_v_handle;
- typedef typename Dark_triangulation::Full_cell_handle Dark_s_handle;
-
- // If flat_orientation_ is defined, we give it the Dark triangulation
- // so that the orientation it uses for "current_dimension()"-simplices is
- // coherent with the global triangulation
- Dark_triangulation dark_side(
- maximal_dimension(),
- flat_orientation_ ?
- std::pair<int, const Flat_orientation_d *>(current_dimension(), flat_orientation_.get_ptr())
- : std::pair<int, const Flat_orientation_d *>(std::numeric_limits<int>::max(), NULL) );
-
- Dark_s_handle dark_s;
- Dark_v_handle dark_v;
- typedef std::map<Vertex_handle, Dark_v_handle> Vertex_map;
- Vertex_map light_to_dark;
- typename Vertex_set::iterator vit = verts.begin();
- while( vit != verts.end() )
- {
- dark_v = dark_side.insert((*vit)->point(), dark_s);
- dark_s = dark_v->full_cell();
- dark_v->data() = *vit;
- light_to_dark[*vit] = dark_v;
- ++vit;
- }
-
- if( dark_side.current_dimension() != current_dimension() )
- {
- CGAL_assertion( dark_side.current_dimension() + 1 == current_dimension() );
- // Here, the finite neighbors of |v| span a affine subspace of
- // dimension one less than the current dimension. Two cases are possible:
- if( (size_type)(verts.size() + 1) == number_of_vertices() )
- {
- remove_decrease_dimension(v);
- return Full_cell_handle();
- }
- else
- { // |v| is strictly outside the convex hull of the rest of the points. This is an
- // easy case: first, modify the finite full_cells, then, delete the infinite ones.
- // We don't even need the Dark triangulation.
- Simplices infinite_simps;
- {
- Simplices finite_simps;
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- if( is_infinite(*it) )
- infinite_simps.push_back(*it);
- else
- finite_simps.push_back(*it);
- simps.swap(finite_simps);
- } // now, simps only contains finite simplices
- // First, modify the finite full_cells:
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- {
- int v_idx = (*it)->index(v);
- tds().associate_vertex_with_full_cell(*it, v_idx, infinite_vertex());
- }
- // Make the handles to infinite full cells searchable
- infinite_simps.make_searchable();
- // Then, modify the neighboring relation
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- {
- for( int i = 0 ; i <= current_dimension(); ++i )
- {
- if (is_infinite((*it)->vertex(i)))
- continue;
- (*it)->vertex(i)->set_full_cell(*it);
- Full_cell_handle n = (*it)->neighbor(i);
- // Was |n| a finite full cell prior to removing |v| ?
- if( ! infinite_simps.contains(n) )
- continue;
- int n_idx = n->index(v);
- set_neighbors(*it, i, n->neighbor(n_idx), n->neighbor(n_idx)->index(n));
- }
- }
- Full_cell_handle ret_s;
- // Then, we delete the infinite full_cells
- for( typename Simplices::iterator it = infinite_simps.begin(); it != infinite_simps.end(); ++it )
- tds().delete_full_cell(*it);
- tds().delete_vertex(v);
- return simps.front();
- }
- }
- else // From here on, dark_side.current_dimension() == current_dimension()
- {
- dark_side.infinite_vertex()->data() = infinite_vertex();
- light_to_dark[infinite_vertex()] = dark_side.infinite_vertex();
- }
-
- // Now, compute the conflict zone of v->point() in
- // the dark side. This is precisely the set of full_cells
- // that we have to glue back into the light side.
- Dark_face dark_f(dark_side.maximal_dimension());
- Dark_facet dark_ft;
- typename Dark_triangulation::Locate_type lt;
- dark_s = dark_side.locate(v->point(), lt, dark_f, dark_ft);
- CGAL_assertion( lt != Dark_triangulation::ON_VERTEX
- && lt != Dark_triangulation::OUTSIDE_AFFINE_HULL );
-
- // |ret_s| is the full_cell that we return
- Dark_s_handle dark_ret_s = dark_s;
- Full_cell_handle ret_s;
-
- typedef typename Base::template Full_cell_set<Dark_s_handle> Dark_full_cells;
- Dark_full_cells conflict_zone;
- std::back_insert_iterator<Dark_full_cells> dark_out(conflict_zone);
-
- dark_ft = dark_side.compute_conflict_zone(v->point(), dark_s, dark_out);
- // Make the dark simplices in the conflict zone searchable
- conflict_zone.make_searchable();
-
- // THE FOLLOWING SHOULD MAYBE GO IN TDS.
- // Here is the plan:
- // 1. Pick any Facet from boundary of the light zone
- // 2. Find corresponding Facet on boundary of dark zone
- // 3. stitch.
-
- // 1. Build a facet on the boudary of the light zone:
- Full_cell_handle light_s = *simps.begin();
- Facet light_ft(light_s, light_s->index(v));
-
- // 2. Find corresponding Dark_facet on boundary of the dark zone
- Dark_full_cells dark_incident_s;
- for( int i = 0; i <= current_dimension(); ++i )
- {
- if( index_of_covertex(light_ft) == i )
- continue;
- Dark_v_handle dark_v = light_to_dark[full_cell(light_ft)->vertex(i)];
- dark_incident_s.clear();
- dark_out = std::back_inserter(dark_incident_s);
- dark_side.tds().incident_full_cells(dark_v, dark_out);
- for(typename Dark_full_cells::iterator it = dark_incident_s.begin();
- it != dark_incident_s.end();
- ++it)
- {
- (*it)->data().count_ += 1;
- }
- }
-
- for( typename Dark_full_cells::iterator it = dark_incident_s.begin(); it != dark_incident_s.end(); ++it )
- {
- if( current_dimension() != (*it)->data().count_ )
- continue;
- if( ! conflict_zone.contains(*it) )
- continue;
- // We found a full_cell incident to the dark facet corresponding to the light facet |light_ft|
- int ft_idx = 0;
- while( light_s->has_vertex( (*it)->vertex(ft_idx)->data() ) )
- ++ft_idx;
- dark_ft = Dark_facet(*it, ft_idx);
- break;
- }
- // Pre-3. Now, we are ready to traverse both boundary and do the stiching.
-
- // But first, we create the new full_cells in the light triangulation,
- // with as much adjacency information as possible.
-
- // Create new full_cells with vertices
- for( typename Dark_full_cells::iterator it = conflict_zone.begin(); it != conflict_zone.end(); ++it )
- {
- Full_cell_handle new_s = new_full_cell();
- (*it)->data().light_copy_ = new_s;
- for( int i = 0; i <= current_dimension(); ++i )
- tds().associate_vertex_with_full_cell(new_s, i, (*it)->vertex(i)->data());
- if( dark_ret_s == *it )
- ret_s = new_s;
- }
-
- // Setup adjacencies inside the hole
- for( typename Dark_full_cells::iterator it = conflict_zone.begin(); it != conflict_zone.end(); ++it )
- {
- Full_cell_handle new_s = (*it)->data().light_copy_;
- for( int i = 0; i <= current_dimension(); ++i )
- if( conflict_zone.contains((*it)->neighbor(i)) )
- tds().set_neighbors(new_s, i, (*it)->neighbor(i)->data().light_copy_, (*it)->mirror_index(i));
- }
-
- // 3. Stitch
- simps.make_searchable();
- typedef std::queue<std::pair<Facet, Dark_facet> > Queue;
- Queue q;
- q.push(std::make_pair(light_ft, dark_ft));
- dark_s = dark_side.full_cell(dark_ft);
- int dark_i = dark_side.index_of_covertex(dark_ft);
- // mark dark_ft as visited:
- // TODO try by marking with Dark_v_handle (vertex)
- dark_s->neighbor(dark_i)->set_neighbor(dark_s->mirror_index(dark_i), Dark_s_handle());
- while( ! q.empty() )
- {
- std::pair<Facet, Dark_facet> p = q.front();
- q.pop();
- light_ft = p.first;
- dark_ft = p.second;
- light_s = full_cell(light_ft);
- int light_i = index_of_covertex(light_ft);
- dark_s = dark_side.full_cell(dark_ft);
- int dark_i = dark_side.index_of_covertex(dark_ft);
- Full_cell_handle light_n = light_s->neighbor(light_i);
- set_neighbors(dark_s->data().light_copy_, dark_i, light_n, light_s->mirror_index(light_i));
- for( int di = 0; di <= current_dimension(); ++di )
- {
- if( di == dark_i )
- continue;
- int li = light_s->index(dark_s->vertex(di)->data());
- Rotor light_r(light_s, li, light_i);
- typename Dark_triangulation::Rotor dark_r(dark_s, di, dark_i);
-
- while( simps.contains(cpp11::get<0>(light_r)->neighbor(cpp11::get<1>(light_r))) )
- light_r = rotate_rotor(light_r);
-
- while( conflict_zone.contains(cpp11::get<0>(dark_r)->neighbor(cpp11::get<1>(dark_r))) )
- dark_r = dark_side.rotate_rotor(dark_r);
-
- Dark_s_handle dark_ns = cpp11::get<0>(dark_r);
- int dark_ni = cpp11::get<1>(dark_r);
- Full_cell_handle light_ns = cpp11::get<0>(light_r);
- int light_ni = cpp11::get<1>(light_r);
- // mark dark_r as visited:
- // TODO try by marking with Dark_v_handle (vertex)
- Dark_s_handle outside = dark_ns->neighbor(dark_ni);
- Dark_v_handle mirror = dark_ns->mirror_vertex(dark_ni, current_dimension());
- int dn = outside->index(mirror);
- if( Dark_s_handle() == outside->neighbor(dn) )
- continue;
- outside->set_neighbor(dn, Dark_s_handle());
- q.push(std::make_pair(Facet(light_ns, light_ni), Dark_facet(dark_ns, dark_ni)));
- }
- }
- tds().delete_full_cells(simps.begin(), simps.end());
- tds().delete_vertex(v);
- return ret_s;
-}
-
-template< typename Traits, typename TDS >
-void
-Regular_triangulation<Traits, TDS>
-::remove_decrease_dimension(Vertex_handle v)
-{
- CGAL_precondition( current_dimension() >= 0 );
- tds().remove_decrease_dimension(v, infinite_vertex());
- // reset the predicates:
- reset_flat_orientation();
- if( 1 <= current_dimension() )
- {
- Full_cell_handle inf_v_cell = infinite_vertex()->full_cell();
- int inf_v_index = inf_v_cell->index(infinite_vertex());
- Full_cell_handle s = inf_v_cell->neighbor(inf_v_index);
- Orientation o = orientation(s);
- CGAL_assertion( ZERO != o );
- if( NEGATIVE == o )
- reorient_full_cells();
- }
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - INSERTIONS
-
-template< typename Traits, typename TDS >
-typename Regular_triangulation<Traits, TDS>::Vertex_handle
-Regular_triangulation<Traits, TDS>
-::insert(const Weighted_point & p, Locate_type lt, const Face & f, const Facet & ft, Full_cell_handle s)
-{
- switch( lt )
- {
- case Base::OUTSIDE_AFFINE_HULL:
- return insert_outside_affine_hull(p);
- break;
- case Base::ON_VERTEX:
- {
- Vertex_handle v = s->vertex(f.index(0));
- typename RTTraits::Compute_weight_d pw =
- geom_traits().compute_weight_d_object();
-
- if (pw(p) == pw(v->point()))
- return v;
- // If dim == 0 and the new point has a bigger weight,
- // we just replace the point, and the former point gets hidden
- else if (current_dimension() == 0)
- {
- if (pw(p) > pw(v->point()))
- {
- m_hidden_points.push_back(v->point());
- v->set_point(p);
- return v;
- }
- // Otherwise, the new point is hidden
- else
- {
- m_hidden_points.push_back(p);
- return Vertex_handle();
- }
- }
- // Otherwise, we apply the "normal" algorithm
-
- // !NO break here!
- }
- default:
- return insert_in_conflicting_cell(p, s);
- }
-}
-
-/*
-Inserts the point `p` in the regular triangulation. Returns a handle to the
-newly created vertex at that position.
-\pre The point `p`
-must lie outside the affine hull of the regular triangulation. This implies that
-`rt`.`current_dimension()` must be smaller than `rt`.`maximal_dimension()`.
-*/
-template< typename Traits, typename TDS >
-typename Regular_triangulation<Traits, TDS>::Vertex_handle
-Regular_triangulation<Traits, TDS>
-::insert_outside_affine_hull(const Weighted_point & p)
-{
- // we don't use Base::insert_outside_affine_hull(...) because here, we
- // also need to reset the side_of_oriented_subsphere functor.
- CGAL_precondition( current_dimension() < maximal_dimension() );
- Vertex_handle v = tds().insert_increase_dimension(infinite_vertex());
- // reset the predicates:
- reset_flat_orientation();
- v->set_point(p);
- if( current_dimension() >= 1 )
- {
- Full_cell_handle inf_v_cell = infinite_vertex()->full_cell();
- int inf_v_index = inf_v_cell->index(infinite_vertex());
- Full_cell_handle s = inf_v_cell->neighbor(inf_v_index);
- Orientation o = orientation(s);
- CGAL_assertion( ZERO != o );
- if( NEGATIVE == o )
- reorient_full_cells();
-
- // We just inserted the second finite point and the right infinite
- // cell is like : (inf_v, v), but we want it to be (v, inf_v) to be
- // consistent with the rest of the cells
- if (current_dimension() == 1)
- {
- // Is "inf_v_cell" the right infinite cell? Then inf_v_index should be 1
- if (inf_v_cell->neighbor(inf_v_index)->index(inf_v_cell) == 0
- && inf_v_index == 0)
- {
- inf_v_cell->swap_vertices(current_dimension() - 1, current_dimension());
- }
- else
- {
- inf_v_cell = inf_v_cell->neighbor((inf_v_index + 1) % 2);
- inf_v_index = inf_v_cell->index(infinite_vertex());
- // Is "inf_v_cell" the right infinite cell? Then inf_v_index should be 1
- if (inf_v_cell->neighbor(inf_v_index)->index(inf_v_cell) == 0
- && inf_v_index == 0)
- {
- inf_v_cell->swap_vertices(current_dimension() - 1, current_dimension());
- }
- }
- }
- }
- return v;
-}
-
-template< typename Traits, typename TDS >
-typename Regular_triangulation<Traits, TDS>::Vertex_handle
-Regular_triangulation<Traits, TDS>
-::insert_if_in_star(const Weighted_point & p,
- Vertex_handle star_center,
- Locate_type lt,
- const Face & f,
- const Facet & ft,
- Full_cell_handle s)
-{
- switch( lt )
- {
- case Base::OUTSIDE_AFFINE_HULL:
- return insert_outside_affine_hull(p);
- break;
- case Base::ON_VERTEX:
- {
- Vertex_handle v = s->vertex(f.index(0));
- typename RTTraits::Compute_weight_d pw =
- geom_traits().compute_weight_d_object();
- if (pw(p) == pw(v->point()))
- return v;
- // If dim == 0 and the new point has a bigger weight,
- // we replace the point
- else if (current_dimension() == 0)
- {
- if (pw(p) > pw(v->point()))
- v->set_point(p);
- else
- return v;
- }
- // Otherwise, we apply the "normal" algorithm
-
- // !NO break here!
- }
- default:
- return insert_in_conflicting_cell(p, s, star_center);
- }
-
- return Vertex_handle();
-}
-
-/*
-[Undocumented function]
-
-Inserts the point `p` in the regular triangulation. `p` must be
-in conflict with the second parameter `c`, which is used as a
-starting point for `compute_conflict_zone`.
-The function is faster than the standard `insert` function since
-it does not need to call `locate`.
-
-If this insertion creates a vertex, this vertex is returned.
-
-If `p` coincides with an existing vertex and has a greater weight,
-then the existing weighted point becomes hidden and `p` replaces it as vertex
-of the triangulation.
-
-If `p` coincides with an already existing vertex (both point and
-weights being equal), then this vertex is returned and the triangulation
-remains unchanged.
-
-Otherwise if `p` does not appear as a vertex of the triangulation,
-then it is stored as a hidden point and this method returns the default
-constructed handle.
-
-\pre The point `p` must be in conflict with the full cell `c`.
-*/
-
-template< typename Traits, typename TDS >
-typename Regular_triangulation<Traits, TDS>::Vertex_handle
-Regular_triangulation<Traits, TDS>
-::insert_in_conflicting_cell(const Weighted_point & p,
- Full_cell_handle s,
- Vertex_handle only_if_this_vertex_is_in_the_cz)
-{
- typedef std::vector<Full_cell_handle> Full_cell_h_vector;
-
- bool in_conflict = is_in_conflict(p, s);
-
- // If p is not in conflict with s, then p is hidden
- // => we don't insert it
- if (!in_conflict)
- {
- m_hidden_points.push_back(p);
- return Vertex_handle();
- }
- else
- {
- Full_cell_h_vector cs; // for storing conflicting full_cells.
- cs.reserve(64);
- std::back_insert_iterator<Full_cell_h_vector> out(cs);
- Facet ft = compute_conflict_zone(p, s, out);
-
- // Check if the CZ contains "only_if_this_vertex_is_in_the_cz"
- if (only_if_this_vertex_is_in_the_cz != Vertex_handle()
- && !does_cell_range_contain_vertex(cs.begin(), cs.end(),
- only_if_this_vertex_is_in_the_cz))
- {
- return Vertex_handle();
- }
-
- // Otherwise, proceed with the insertion
- std::vector<Vertex_handle> cz_vertices;
- cz_vertices.reserve(64);
- process_conflict_zone(cs.begin(), cs.end(),
- std::back_inserter(cz_vertices));
-
- Vertex_handle ret = insert_in_hole(p, cs.begin(), cs.end(), ft);
-
- process_cz_vertices_after_insertion(cz_vertices.begin(), cz_vertices.end());
-
- return ret;
- }
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATHERING CONFLICTING SIMPLICES
-
-// NOT DOCUMENTED
-template< typename Traits, typename TDS >
-template< typename OrientationPred >
-Oriented_side
-Regular_triangulation<Traits, TDS>
-::perturbed_power_side_of_power_sphere(const Weighted_point & p, Full_cell_const_handle s,
- const OrientationPred & ori) const
-{
- CGAL_precondition_msg( ! is_infinite(s), "full cell must be finite");
- CGAL_expensive_precondition( POSITIVE == orientation(s) );
- typedef std::vector<const Weighted_point *> Points;
- Points points(current_dimension() + 2);
- int i(0);
- for( ; i <= current_dimension(); ++i )
- points[i] = &(s->vertex(i)->point());
- points[i] = &p;
- std::sort(points.begin(), points.end(),
- internal::Triangulation::Compare_points_for_perturbation<Self>(*this));
- typename Points::const_reverse_iterator cut_pt = points.rbegin();
- Points test_points;
- while( cut_pt != points.rend() )
- {
- if( &p == *cut_pt )
- // because the full_cell "s" is assumed to be positively oriented
- return ON_NEGATIVE_SIDE; // we consider |p| to lie outside the sphere
- test_points.clear();
- Point_const_iterator spit = points_begin(s);
- int adjust_sign = -1;
- for( i = 0; i < current_dimension(); ++i )
- {
- if( &(*spit) == *cut_pt )
- {
- ++spit;
- adjust_sign = (((current_dimension() + i) % 2) == 0) ? -1 : +1;
- }
- test_points.push_back(&(*spit));
- ++spit;
- }
- test_points.push_back(&p);
-
- typedef typename CGAL::Iterator_project<
- typename Points::iterator,
- internal::Triangulation::Point_from_pointer<Self>,
- const Weighted_point &, const Weighted_point *
- > Point_pointer_iterator;
-
- Orientation ori_value = ori(
- Point_pointer_iterator(test_points.begin()),
- Point_pointer_iterator(test_points.end()));
-
- if( ZERO != ori_value )
- return Oriented_side( - adjust_sign * ori_value );
-
- ++cut_pt;
- }
- CGAL_assertion(false); // we should never reach here
- return ON_NEGATIVE_SIDE;
-}
-
-template< typename Traits, typename TDS >
-bool
-Regular_triangulation<Traits, TDS>
-::is_in_conflict(const Weighted_point & p, Full_cell_const_handle s) const
-{
- CGAL_precondition( 1 <= current_dimension() );
- if( current_dimension() < maximal_dimension() )
- {
- Conflict_pred_in_subspace c(
- *this, p,
- coaffine_orientation_predicate(),
- power_side_of_power_sphere_for_non_maximal_dim_predicate());
- return c(s);
- }
- else
- {
- Orientation_d ori = geom_traits().orientation_d_object();
- Power_side_of_power_sphere_d side = geom_traits().power_side_of_power_sphere_d_object();
- Conflict_pred_in_fullspace c(*this, p, ori, side);
- return c(s);
- }
-}
-
-template< typename Traits, typename TDS >
-template< typename OutputIterator >
-typename Regular_triangulation<Traits, TDS>::Facet
-Regular_triangulation<Traits, TDS>
-::compute_conflict_zone(const Weighted_point & p, Full_cell_handle s, OutputIterator out) const
-{
- CGAL_precondition( 1 <= current_dimension() );
- if( current_dimension() < maximal_dimension() )
- {
- Conflict_pred_in_subspace c(
- *this, p,
- coaffine_orientation_predicate(),
- power_side_of_power_sphere_for_non_maximal_dim_predicate());
- Conflict_traversal_pred_in_subspace tp(*this, c);
- return tds().gather_full_cells(s, tp, out);
- }
- else
- {
- Orientation_d ori = geom_traits().orientation_d_object();
- Power_side_of_power_sphere_d side = geom_traits().power_side_of_power_sphere_d_object();
- Conflict_pred_in_fullspace c(*this, p, ori, side);
- Conflict_traversal_pred_in_fullspace tp(*this, c);
- return tds().gather_full_cells(s, tp, out);
- }
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - VALIDITY
-
-template< typename Traits, typename TDS >
-bool
-Regular_triangulation<Traits, TDS>
-::is_valid(bool verbose, int level) const
-{
- if (!Base::is_valid(verbose, level))
- return false;
-
- int dim = current_dimension();
- if (dim == maximal_dimension())
- {
- for (Finite_full_cell_const_iterator cit = finite_full_cells_begin() ;
- cit != finite_full_cells_end() ; ++cit )
- {
- Full_cell_const_handle ch = cit.base();
- for(int i = 0; i < dim+1 ; ++i )
- {
- // If the i-th neighbor is not an infinite cell
- Vertex_handle opposite_vh =
- ch->neighbor(i)->vertex(ch->neighbor(i)->index(ch));
- if (!is_infinite(opposite_vh))
- {
- Power_side_of_power_sphere_d side =
- geom_traits().power_side_of_power_sphere_d_object();
- if (side(Point_const_iterator(ch->vertices_begin()),
- Point_const_iterator(ch->vertices_end()),
- opposite_vh->point()) == ON_POSITIVE_SIDE)
- {
- if (verbose)
- CGAL_warning_msg(false, "Non-empty sphere");
- return false;
- }
- }
- }
- }
- }
- return true;
-}
-
-} //namespace CGAL
-
-#endif //CGAL_REGULAR_TRIANGULATION_H
diff --git a/include/gudhi_patches/CGAL/Regular_triangulation_traits_adapter.h b/include/gudhi_patches/CGAL/Regular_triangulation_traits_adapter.h
deleted file mode 100644
index 78bb95a6..00000000
--- a/include/gudhi_patches/CGAL/Regular_triangulation_traits_adapter.h
+++ /dev/null
@@ -1,288 +0,0 @@
-// Copyright (c) 2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Clement Jamin
-
-#ifndef CGAL_REGULAR_TRIANGULATION_TRAITS_ADAPTER_H
-#define CGAL_REGULAR_TRIANGULATION_TRAITS_ADAPTER_H
-
-#include <CGAL/basic.h>
-
-#include <boost/iterator/transform_iterator.hpp>
-
-namespace CGAL {
-
-// Wrapper class to make a model of `RegularTriangulationTraits` easily usable
-// by the `Regular_triangulation` class. By using this class:
-// - Point_d (used by `Triangulation` and the TDS) becomes a weighted point
-// - Predicates and functors such as Less_coordinate_d or Orientation_d
-// can be called using weighted points instead of bare points (this is
-// needed because `Weighted_point_d` is not convertible to `Point_d`)
-// This way, `Triangulation` works perfectly well with weighted points.
-
-template <class K>
-class Regular_triangulation_traits_adapter
- : public K
-{
-public:
- typedef K Base;
-
- // Required by TriangulationTraits
- typedef typename K::Dimension Dimension;
- typedef typename K::FT FT;
- typedef typename K::Flat_orientation_d Flat_orientation_d;
- typedef typename K::Weighted_point_d Point_d;
-
- // Required by RegularTriangulationTraits
- typedef typename K::Point_d Bare_point_d;
- typedef typename K::Weighted_point_d Weighted_point_d;
- typedef typename K::Construct_point_d Construct_point_d;
- typedef typename K::Compute_weight_d Compute_weight_d;
- typedef typename K::Power_side_of_power_sphere_d Power_side_of_power_sphere_d;
- typedef typename K::In_flat_power_side_of_power_sphere_d
- In_flat_power_side_of_power_sphere_d;
-
- //===========================================================================
- // Custom types
- //===========================================================================
-
- // Required by SpatialSortingTraits_d
- class Less_coordinate_d
- {
- const K &m_kernel;
-
- public:
- typedef bool result_type;
-
- Less_coordinate_d(const K &kernel)
- : m_kernel(kernel) {}
-
- result_type operator()(
- Weighted_point_d const& p, Weighted_point_d const& q, int i) const
- {
- Construct_point_d cp = m_kernel.construct_point_d_object();
- return m_kernel.less_coordinate_d_object() (cp(p), cp(q), i);
- }
- };
-
- //===========================================================================
-
- // Required by TriangulationTraits
- class Orientation_d
- {
- const K &m_kernel;
-
- public:
- typedef Orientation result_type;
-
- Orientation_d(const K &kernel)
- : m_kernel(kernel) {}
-
- template <typename ForwardIterator>
- result_type operator()(ForwardIterator start, ForwardIterator end) const
- {
- Construct_point_d cp = m_kernel.construct_point_d_object();
- return m_kernel.orientation_d_object() (
- boost::make_transform_iterator(start, cp),
- boost::make_transform_iterator(end, cp)
- );
- }
- };
-
- //===========================================================================
-
- // Required by TriangulationTraits
- class Construct_flat_orientation_d
- {
- const K &m_kernel;
-
- public:
- typedef Flat_orientation_d result_type;
-
- Construct_flat_orientation_d(const K &kernel)
- : m_kernel(kernel) {}
-
- template <typename ForwardIterator>
- result_type operator()(ForwardIterator start, ForwardIterator end) const
- {
- Construct_point_d cp = m_kernel.construct_point_d_object();
- return m_kernel.construct_flat_orientation_d_object() (
- boost::make_transform_iterator(start, cp),
- boost::make_transform_iterator(end, cp)
- );
- }
- };
-
-
- //===========================================================================
-
- // Required by TriangulationTraits
- class In_flat_orientation_d
- {
- const K &m_kernel;
-
- public:
- typedef Orientation result_type;
-
- In_flat_orientation_d(const K &kernel)
- : m_kernel(kernel) {}
-
- template <typename ForwardIterator>
- result_type operator()(Flat_orientation_d orient,
- ForwardIterator start, ForwardIterator end) const
- {
- Construct_point_d cp = m_kernel.construct_point_d_object();
- return m_kernel.in_flat_orientation_d_object() (
- orient,
- boost::make_transform_iterator(start, cp),
- boost::make_transform_iterator(end, cp)
- );
- }
- };
-
- //===========================================================================
-
- // Required by TriangulationTraits
- class Contained_in_affine_hull_d
- {
- const K &m_kernel;
-
- public:
- typedef bool result_type;
-
- Contained_in_affine_hull_d(const K &kernel)
- : m_kernel(kernel) {}
-
- template <typename ForwardIterator>
- result_type operator()(ForwardIterator start, ForwardIterator end,
- const Weighted_point_d & p) const
- {
- Construct_point_d cp = m_kernel.construct_point_d_object();
- return m_kernel.contained_in_affine_hull_d_object() (
- boost::make_transform_iterator(start, cp),
- boost::make_transform_iterator(end, cp),
- cp(p)
- );
- }
- };
-
- //===========================================================================
-
- // Required by TriangulationTraits
- class Compare_lexicographically_d
- {
- const K &m_kernel;
-
- public:
- typedef Comparison_result result_type;
-
- Compare_lexicographically_d(const K &kernel)
- : m_kernel(kernel) {}
-
- result_type operator()(
- const Weighted_point_d & p, const Weighted_point_d & q) const
- {
- Construct_point_d cp = m_kernel.construct_point_d_object();
- return m_kernel.compare_lexicographically_d_object()(cp(p), cp(q));
- }
- };
-
- //===========================================================================
-
- // Only for Triangulation_off_ostream.h (undocumented)
- class Compute_coordinate_d
- {
- const K &m_kernel;
-
- public:
- typedef FT result_type;
-
- Compute_coordinate_d(const K &kernel)
- : m_kernel(kernel) {}
-
- result_type operator()(
- const Weighted_point_d & p, const int i) const
- {
- Construct_point_d cp = m_kernel.construct_point_d_object();
- return m_kernel.compute_coordinate_d_object()(cp(p), i);
- }
- };
-
- //===========================================================================
-
- // To satisfy SpatialSortingTraits_d
- // and also for Triangulation_off_ostream.h (undocumented)
- class Point_dimension_d
- {
- const K &m_kernel;
-
- public:
- typedef int result_type;
-
- Point_dimension_d(const K &kernel)
- : m_kernel(kernel) {}
-
- result_type operator()(
- const Weighted_point_d & p) const
- {
- Construct_point_d cp = m_kernel.construct_point_d_object();
- return m_kernel.point_dimension_d_object()(cp(p));
- }
- };
-
- //===========================================================================
- // Object creation
- //===========================================================================
-
- Less_coordinate_d less_coordinate_d_object() const
- {
- return Less_coordinate_d(*this);
- }
- Contained_in_affine_hull_d contained_in_affine_hull_d_object() const
- {
- return Contained_in_affine_hull_d(*this);
- }
- Orientation_d orientation_d_object() const
- {
- return Orientation_d(*this);
- }
- Construct_flat_orientation_d construct_flat_orientation_d_object() const
- {
- return Construct_flat_orientation_d(*this);
- }
- In_flat_orientation_d in_flat_orientation_d_object() const
- {
- return In_flat_orientation_d(*this);
- }
- Compare_lexicographically_d compare_lexicographically_d_object() const
- {
- return Compare_lexicographically_d(*this);
- }
- Compute_coordinate_d compute_coordinate_d_object() const
- {
- return Compute_coordinate_d(*this);
- }
- Point_dimension_d point_dimension_d_object() const
- {
- return Point_dimension_d(*this);
- }
-};
-
-
-} //namespace CGAL
-
-#endif // CGAL_REGULAR_TRIANGULATION_TRAITS_ADAPTER_H
diff --git a/include/gudhi_patches/CGAL/TDS_full_cell_default_storage_policy.h b/include/gudhi_patches/CGAL/TDS_full_cell_default_storage_policy.h
deleted file mode 100644
index 9a6030e5..00000000
--- a/include/gudhi_patches/CGAL/TDS_full_cell_default_storage_policy.h
+++ /dev/null
@@ -1,99 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TDS_FULL_CELL_DEFAULT_STORAGE_POLICY_H
-#define CGAL_TDS_FULL_CELL_DEFAULT_STORAGE_POLICY_H
-
-#include <CGAL/Dimension.h>
-#include <CGAL/Compact_container.h>
-#include <CGAL/internal/Static_or_dynamic_array.h>
-
-#include <boost/cstdint.hpp>
-
-namespace CGAL {
-
-// POLICY TAG
-
-struct TDS_full_cell_default_storage_policy {}; // stores no additional data. Uses XOR trick.
-
-template< typename V, typename S, typename D, typename StoragePolicy >
-struct TFC_data; // TFC = Triangulation Full Cell
-
-template< typename Vertex_handle, typename Full_cell_handle, typename Dimen >
-struct TFC_data< Vertex_handle, Full_cell_handle, Dimen, TDS_full_cell_default_storage_policy >
-{
- typedef typename internal::Dimen_plus_one<Dimen>::type Dimen_plus;
- typedef typename internal::S_or_D_array< Vertex_handle, Dimen_plus, true > Vertex_handle_array;
- typedef typename internal::S_or_D_array< Full_cell_handle, Dimen_plus > Full_cell_handle_array;
-
- Vertex_handle_array vertices_;
- Full_cell_handle_array neighbors_;
-
- TFC_data(const int dmax)
- : vertices_(dmax+1), neighbors_(dmax+1)
- {}
- void* for_compact_container() const { return vertices_.for_compact_container(); }
- void* & for_compact_container() { return vertices_.for_compact_container(); }
- int dimension() const { return ( vertices_.size() - 1 ); }
- void set_mirror_index(const int, const int) {}
-#ifdef BOOST_NO_INT64_T
- typedef std::ptrdiff_t Xor_type;
-#else
- typedef boost::int_least64_t Xor_type;
-#endif
- Xor_type xor_of_vertices(const int cur_dim) const
- {
- Xor_type result(0);
- for( int i = 0; i <= cur_dim; ++i )
- result ^= reinterpret_cast<Xor_type>(&(*vertices_[i]));
- return result;
- }
- // ASSUMES |*this| is indeed a neighbor of neighbor(i):
- // NOT correct when the hole (in insert_in_hole) is doubly covered.
- int mirror_index(const int i) const
- {
- int index = 0;
- Full_cell_handle n = neighbors_[i];
- Full_cell_handle o = n->neighbor(index);
- while( &(o->combinatorics_) != this )
- o = n->neighbor(++index);
- return index;
- }
- Vertex_handle mirror_vertex(const int i, const int cur_dim) const
- {
- Xor_type opp_vertex = xor_of_vertices(cur_dim)
- ^ neighbors_[i]->xor_of_vertices(cur_dim)
- ^ reinterpret_cast<Xor_type>(&(*vertices_[i]));
- Vertex_handle mirror;
- typedef typename Vertex_handle::pointer pointer;
- // mirror.set_pointer(reinterpret_cast<pointer>(opp_vertex));
- mirror = Compact_container<typename Vertex_handle::value_type>
- ::s_iterator_to(*(reinterpret_cast<pointer>(opp_vertex)));
- return mirror;
- }
- void swap_vertices(const int d1, const int d2)
- {
- std::swap(vertices_[d1], vertices_[d2]);
- std::swap(neighbors_[d1], neighbors_[d2]);
- }
-};
-
-} //namespace CGAL
-
-#endif // CGAL_TDS_FULL_CELL_DEFAULT_STORAGE_POLICY_H
diff --git a/include/gudhi_patches/CGAL/TDS_full_cell_mirror_storage_policy.h b/include/gudhi_patches/CGAL/TDS_full_cell_mirror_storage_policy.h
deleted file mode 100644
index 095dfe68..00000000
--- a/include/gudhi_patches/CGAL/TDS_full_cell_mirror_storage_policy.h
+++ /dev/null
@@ -1,71 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TDS_FULL_CELL_MIRROR_STORAGE_POLICY_H
-#define CGAL_TDS_FULL_CELL_MIRROR_STORAGE_POLICY_H
-
-#include <CGAL/TDS_full_cell_default_storage_policy.h>
-
-namespace CGAL {
-
-// POLICY TAGS
-
-struct TDS_full_cell_mirror_storage_policy {}; // Stores the mirror index of all vertices.
-
-template< typename Vertex_handle, typename Full_cell_handle, typename Maximal_dimension >
-struct TFC_data< Vertex_handle, Full_cell_handle, Maximal_dimension, TDS_full_cell_mirror_storage_policy >
-: public TFC_data< Vertex_handle, Full_cell_handle, Maximal_dimension, TDS_full_cell_default_storage_policy >
-{
- typedef TFC_data< Vertex_handle, Full_cell_handle, Maximal_dimension, TDS_full_cell_default_storage_policy > Base;
- typedef typename Base::Vertex_handle_array Vertex_handle_array;
- typedef typename Base::Full_cell_handle_array Full_cell_handle_array;
- typedef typename internal::S_or_D_array< int, typename Base::Dimen_plus > Int_array;
-
-private:
- Int_array mirror_vertices_;
-
-public:
- TFC_data(const int dmax)
- : Base(dmax), mirror_vertices_(dmax+1)
- {}
-
- void set_mirror_index(const int i, const int index)
- {
- mirror_vertices_[i] = index;
- }
- int mirror_index(const int i) const
- {
- return mirror_vertices_[i];
- }
- Vertex_handle mirror_vertex(const int i, const int) const
- {
- return Base::neighbors_[i]->vertex(mirror_index(i));
- }
- void swap_vertices(const int d1, const int d2)
- {
- Base::swap_vertices(d1, d2);
- std::swap(mirror_vertices_[d1], mirror_vertices_[d2]);
- Base::neighbors_[d1]->set_mirror_index(mirror_vertices_[d1], d1);
- Base::neighbors_[d2]->set_mirror_index(mirror_vertices_[d2], d2);
- }
-};
-
-} //namespace CGAL
-
-#endif // CGAL_TDS_FULL_CELL_MIRROR_STORAGE_POLICY_H
diff --git a/include/gudhi_patches/CGAL/Triangulation.h b/include/gudhi_patches/CGAL/Triangulation.h
deleted file mode 100644
index 906df92e..00000000
--- a/include/gudhi_patches/CGAL/Triangulation.h
+++ /dev/null
@@ -1,1424 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TRIANGULATION_H
-#define CGAL_TRIANGULATION_H
-
-#include <CGAL/internal/Triangulation/utilities.h>
-#include <CGAL/Triangulation_data_structure.h>
-#include <CGAL/Triangulation_full_cell.h>
-#include <CGAL/Triangulation_vertex.h>
-#include <CGAL/Iterator_project.h>
-#include <CGAL/spatial_sort.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/iterator.h>
-#include <CGAL/Default.h>
-#include <CGAL/Random.h>
-
-#include <boost/iterator/filter_iterator.hpp>
-#include <boost/iterator/transform_iterator.hpp>
-
-namespace CGAL {
-
-// Iterator which iterates over vertex_handle's, but returns a point when
-// dereferenced. If the current
-// vertex_handle vh == vh_where_point_should_be_substituted, it returns
-// "subtitute_point", otherwise, it returns vh->point()
-template<class VertexHandleConstIter>
-class Substitute_point_in_vertex_iterator
-{
- typedef typename std::iterator_traits<VertexHandleConstIter>::value_type Vertex_handle;
- typedef typename Vertex_handle::value_type Vertex;
- typedef typename Vertex::Point Point;
-
-public:
- typedef Point const& result_type; // For result_of
-
- Substitute_point_in_vertex_iterator(
- Vertex_handle vh_where_point_should_be_substituted,
- Point const *subtitute_point)
- : vh_where_point_should_be_substituted_(vh_where_point_should_be_substituted)
- , subtitute_point_(subtitute_point)
- {}
-
- result_type operator()(Vertex_handle vh) const
- {
- if (vh == vh_where_point_should_be_substituted_)
- return *subtitute_point_;
- else
- return vh->point();
- }
-
-private:
- Vertex_handle vh_where_point_should_be_substituted_;
- Point const *subtitute_point_;
-
-};
-
-
-template < class TriangulationTraits, class TDS_ = Default >
-class Triangulation
-{
- typedef typename TriangulationTraits::Dimension Maximal_dimension_;
- typedef typename Default::Get<TDS_, Triangulation_data_structure
- < Maximal_dimension_,
- Triangulation_vertex<TriangulationTraits>,
- Triangulation_full_cell<TriangulationTraits> >
- >::type TDS;
- typedef Triangulation<TriangulationTraits, TDS_> Self;
-
-protected:
- typedef typename TriangulationTraits::Flat_orientation_d Flat_orientation_d;
- typedef typename TriangulationTraits::Construct_flat_orientation_d Construct_flat_orientation_d;
- typedef typename TriangulationTraits::In_flat_orientation_d In_flat_orientation_d;
-
- // Wrapper
- struct Coaffine_orientation_d
- {
- boost::optional<Flat_orientation_d>* fop;
- Construct_flat_orientation_d cfo;
- In_flat_orientation_d ifo;
-
- Coaffine_orientation_d(
- boost::optional<Flat_orientation_d>& x,
- Construct_flat_orientation_d const&y,
- In_flat_orientation_d const&z)
- : fop(&x), cfo(y), ifo(z) {}
-
- template<class Iter>
- CGAL::Orientation operator()(Iter a, Iter b) const
- {
- if (*fop)
- return ifo(fop->get(),a,b);
- *fop = cfo(a,b);
- CGAL_assertion(ifo(fop->get(),a,b) == CGAL::POSITIVE);
- return CGAL::POSITIVE;
- }
- };
-
- void reset_flat_orientation()
- {
- if (current_dimension() == preset_flat_orientation_.first)
- {
- CGAL_assertion(preset_flat_orientation_.second != NULL);
- flat_orientation_ = *preset_flat_orientation_.second;
- }
- else
- flat_orientation_ = boost::none;
- }
-
- typedef typename TriangulationTraits::Orientation_d
- Orientation_d;
-
-public:
-
- typedef TriangulationTraits Geom_traits;
- typedef TDS Triangulation_ds;
-
- typedef typename TDS::Vertex Vertex;
- typedef typename TDS::Full_cell Full_cell;
- typedef typename TDS::Facet Facet;
- typedef typename TDS::Face Face;
-
- typedef Maximal_dimension_ Maximal_dimension;
- typedef typename Geom_traits::Point_d Point;
-
- typedef typename TDS::Vertex_handle Vertex_handle;
- typedef typename TDS::Vertex_iterator Vertex_iterator;
- typedef typename TDS::Vertex_const_handle Vertex_const_handle;
- typedef typename TDS::Vertex_const_iterator Vertex_const_iterator;
-
- typedef typename TDS::Full_cell_handle Full_cell_handle;
- typedef typename TDS::Full_cell_iterator Full_cell_iterator;
- typedef typename TDS::Full_cell_const_handle Full_cell_const_handle;
- typedef typename TDS::Full_cell_const_iterator Full_cell_const_iterator;
-
- typedef typename TDS::Facet_iterator Facet_iterator;
-
- typedef typename TDS::size_type size_type;
- typedef typename TDS::difference_type difference_type;
-
- /// The type of location a new point is found lying on
- enum Locate_type
- {
- ON_VERTEX = 0 // simplex of dimension 0
- , IN_FACE = 1 // simplex of dimension in [ 1, |current_dimension()| - 2 ]
- , IN_FACET = 2 // simplex of dimension |current_dimension()| - 1
- , IN_FULL_CELL = 3 /// simplex of dimension |current_dimension()|
- , OUTSIDE_CONVEX_HULL = 4
- , OUTSIDE_AFFINE_HULL = 5
- };
-
- // Finite elements iterators
-
- class Finiteness_predicate;
-
- typedef boost::filter_iterator<Finiteness_predicate, Vertex_iterator>
- Finite_vertex_iterator;
- typedef boost::filter_iterator<Finiteness_predicate, Vertex_const_iterator>
- Finite_vertex_const_iterator;
- typedef boost::filter_iterator<Finiteness_predicate, Full_cell_iterator>
- Finite_full_cell_iterator;
- typedef boost::filter_iterator<Finiteness_predicate, Full_cell_const_iterator>
- Finite_full_cell_const_iterator;
- typedef boost::filter_iterator<Finiteness_predicate, Facet_iterator>
- Finite_facet_iterator;
-
-protected: // DATA MEMBERS
-
- Triangulation_ds tds_;
- const Geom_traits kernel_;
- Vertex_handle infinity_;
- mutable std::vector<Oriented_side> orientations_;
- mutable boost::optional<Flat_orientation_d> flat_orientation_;
- // The user can specify a Flat_orientation_d object to be used for
- // orienting simplices of a specific dimension
- // (= preset_flat_orientation_.first)
- // preset_flat_orientation_.first = numeric_limits<int>::max() otherwise)
- std::pair<int, const Flat_orientation_d *> preset_flat_orientation_;
- // for stochastic walk in the locate() function:
- mutable Random rng_;
-#ifdef CGAL_TRIANGULATION_STATISTICS
- mutable unsigned long walk_size_;
-#endif
-
-protected: // HELPER FUNCTIONS
-
- typedef CGAL::Iterator_project<
- typename Full_cell::Vertex_handle_const_iterator,
- internal::Triangulation::Point_from_vertex_handle<Vertex_handle, Point>
- > Point_const_iterator;
-
- Point_const_iterator points_begin(Full_cell_const_handle c) const
- { return Point_const_iterator(c->vertices_begin()); }
- Point_const_iterator points_end(Full_cell_const_handle c) const
- { return Point_const_iterator(c->vertices_end()); }
- Point_const_iterator points_begin(Full_cell_handle c) const
- { return Point_const_iterator(c->vertices_begin()); }
- Point_const_iterator points_end(Full_cell_handle c) const
- { return Point_const_iterator(c->vertices_end()); }
-
-public:
-
- // FACETS OPERATIONS
-
- Full_cell_handle full_cell(const Facet & f) const
- {
- return tds().full_cell(f);
- }
-
- int index_of_covertex(const Facet & f) const
- {
- return tds().index_of_covertex(f);
- }
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - UTILITIES
-
- // A co-dimension 2 sub-simplex. called a Rotor because we can rotate
- // the two "covertices" around the sub-simplex. Useful for traversing the
- // boundary of a hole. NOT DOCUMENTED
- typedef cpp11::tuple<Full_cell_handle, int, int> Rotor;
-
- // Commented out because it was causing "internal compiler error" in MSVC
- /*Full_cell_handle full_cell(const Rotor & r) const // NOT DOCUMENTED
- {
- return cpp11::get<0>(r);
- }
- int index_of_covertex(const Rotor & r) const // NOT DOCUMENTED
- {
- return cpp11::get<1>(r);
- }
- int index_of_second_covertex(const Rotor & r) const // NOT DOCUMENTED
- {
- return cpp11::get<2>(r);
- }*/
- Rotor rotate_rotor(Rotor & r) // NOT DOCUMENTED...
- {
- int opposite = cpp11::get<0>(r)->mirror_index(cpp11::get<1>(r));
- Full_cell_handle s = cpp11::get<0>(r)->neighbor(cpp11::get<1>(r));
- int new_second = s->index(cpp11::get<0>(r)->vertex(cpp11::get<2>(r)));
- return Rotor(s, new_second, opposite);
- }
-
- // - - - - - - - - - - - - - - - - - - - - - - - - CREATION / CONSTRUCTORS
-
- Triangulation(int dim, const Geom_traits &k = Geom_traits())
- : tds_(dim)
- , kernel_(k)
- , infinity_()
- , preset_flat_orientation_((std::numeric_limits<int>::max)(),
- (Flat_orientation_d*) NULL)
- , rng_((long)0)
-#ifdef CGAL_TRIANGULATION_STATISTICS
- ,walk_size_(0)
-#endif
- {
- clear();
- }
-
- // With this constructor,
- // the user can specify a Flat_orientation_d object to be used for
- // orienting simplices of a specific dimension
- // (= preset_flat_orientation_.first)
- // It it used for by dark triangulations created by DT::remove
- Triangulation(
- int dim,
- const std::pair<int, const Flat_orientation_d *> &preset_flat_orientation,
- const Geom_traits k = Geom_traits())
- : tds_(dim)
- , kernel_(k)
- , infinity_()
- , preset_flat_orientation_(preset_flat_orientation)
- , rng_((long)0)
-#ifdef CGAL_TRIANGULATION_STATISTICS
- ,walk_size_(0)
-#endif
- {
- clear();
- }
-
- Triangulation(const Triangulation & t2)
- : tds_(t2.tds_)
- , kernel_(t2.kernel_)
- , infinity_()
- , preset_flat_orientation_((std::numeric_limits<int>::max)(),
- (Flat_orientation_d*) NULL)
- , rng_(t2.rng_)
-#ifdef CGAL_TRIANGULATION_STATISTICS
- ,walk_size_(t2.walk_size_)
-#endif
- {
- // We find the vertex at infinity by scanning the vertices of both
- // triangulations. This works because Compact_container garantees that
- // the vertices in the copy (*this) are stored in the same order as in
- // the original triangulation (t2)
- infinity_ = vertices_begin();
- Vertex_const_iterator inf2 = t2.vertices_begin();
- while( inf2 != t2.infinite_vertex() )
- {
- ++infinity_;
- ++inf2;
- }
- // A full_cell has at most 1 + maximal_dimension() facets:
- orientations_.resize(1 + maximal_dimension());
- // Our coaffine orientation predicates HAS state member variables
- reset_flat_orientation();
- }
-
- ~Triangulation() {}
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ACCESS FUNCTIONS
-
- /* These three function are no longer needed since we do not use them anymore
- in the Delaunay_triangulation::remove. *But*, they may reappear in the future
- if we manage to passe the information that flags/TDS_data is available or not
- for marking simplices in Delaunay_triangulation::remove. This would be useful
- to make it a little faster, instead of binary searching if a simplex is marked
- or not...
- // NOT DOCUMENTED --
- bool get_visited(Full_cell_handle s) const
- {
- return tds().get_visited(s);
- }
- // NOT DOCUMENTED --
- bool get_visited(Full_cell_const_handle s) const
- {
- return tds().get_visited(s);
- }
-
- // NOT DOCUMENTED --
- void set_visited(Full_cell_handle s, bool b) const
- {
- tds().set_visited(s, b);
- } */
-
- Coaffine_orientation_d coaffine_orientation_predicate() const
- {
- return Coaffine_orientation_d (
- flat_orientation_,
- geom_traits().construct_flat_orientation_d_object(),
- geom_traits().in_flat_orientation_d_object()
- );
- }
-
- const Triangulation_ds & tds() const
- {
- return tds_;
- }
-
- Triangulation_ds & tds()
- {
- return tds_;
- }
-
- const Geom_traits & geom_traits() const
- {
- return kernel_;
- }
-
- int maximal_dimension() const { return tds().maximal_dimension(); }
- int current_dimension() const { return tds().current_dimension(); }
-
- bool empty() const
- {
- return current_dimension() == -1;
- }
-
- size_type number_of_vertices() const
- {
- return tds().number_of_vertices() - 1;
- }
-
- size_type number_of_full_cells() const
- {
- return tds().number_of_full_cells();
- }
-
- Vertex_handle infinite_vertex() const
- {
- return infinity_;
- }
-
- Full_cell_handle infinite_full_cell() const
- {
- CGAL_assertion(infinite_vertex()->full_cell()->has_vertex(infinite_vertex()));
- return infinite_vertex()->full_cell();
- }
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - NON CONSTANT-TIME ACCESS FUNCTIONS
-
- size_type number_of_finite_full_cells() const
- {
- Full_cell_const_iterator s = full_cells_begin();
- size_type result = number_of_full_cells();
- for( ; s != full_cells_end(); ++s )
- {
- if( is_infinite(s) )
- --result;
- }
- return result;
- }
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TRAVERSAL
-
- Vertex_iterator vertices_begin() { return tds().vertices_begin(); }
- Vertex_iterator vertices_end() { return tds().vertices_end(); }
-
- Vertex_const_iterator vertices_begin() const { return tds().vertices_begin(); }
- Vertex_const_iterator vertices_end() const { return tds().vertices_end(); }
-
- Finite_vertex_iterator finite_vertices_begin()
- { return Finite_vertex_iterator(Finiteness_predicate(*this), vertices_begin(), vertices_end()); }
- Finite_vertex_iterator finite_vertices_end()
- { return Finite_vertex_iterator(Finiteness_predicate(*this), vertices_end(), vertices_end()); }
- Finite_vertex_const_iterator finite_vertices_begin() const
- { return Finite_vertex_const_iterator(Finiteness_predicate(*this), vertices_begin(), vertices_end()); }
- Finite_vertex_const_iterator finite_vertices_end() const
- { return Finite_vertex_const_iterator(Finiteness_predicate(*this), vertices_end(), vertices_end()); }
-
- Full_cell_iterator full_cells_begin() { return tds().full_cells_begin(); }
- Full_cell_iterator full_cells_end() { return tds().full_cells_end(); }
-
- Full_cell_const_iterator full_cells_begin() const { return tds().full_cells_begin(); }
- Full_cell_const_iterator full_cells_end() const { return tds().full_cells_end(); }
-
- Finite_full_cell_iterator finite_full_cells_begin()
- { return Finite_full_cell_iterator(Finiteness_predicate(*this), full_cells_begin(), full_cells_end()); }
- Finite_full_cell_iterator finite_full_cells_end()
- { return Finite_full_cell_iterator(Finiteness_predicate(*this), full_cells_end(), full_cells_end()); }
- Finite_full_cell_const_iterator finite_full_cells_begin() const
- { return Finite_full_cell_const_iterator(Finiteness_predicate(*this), full_cells_begin(), full_cells_end()); }
- Finite_full_cell_const_iterator finite_full_cells_end() const
- { return Finite_full_cell_const_iterator(Finiteness_predicate(*this), full_cells_end(), full_cells_end()); }
-
- Facet_iterator facets_begin() { return tds().facets_begin(); }
- Facet_iterator facets_end() { return tds().facets_end(); }
- Facet_iterator finite_facets_begin()
- { return Finite_facet_iterator(Finiteness_predicate(*this), facets_begin(), facets_end()); }
- Facet_iterator finite_facets_end()
- { return Finite_facet_iterator(Finiteness_predicate(*this), facets_end(), facets_end()); }
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - SOME PREDICATE FUNCTORS
-
- class Finiteness_predicate
- {
- const Self & t_;
- public:
- Finiteness_predicate(const Self & t) : t_(t) {}
- template < class T >
- bool operator()(const T & t) const
- {
- return ! t_.is_infinite(t);
- }
- };
-
- class Point_equality_predicate
- {
- const Point & o_;
- public:
- Point_equality_predicate(const Point & o) : o_(o) {}
- bool operator()(const Point & o) const { return (o == o_ );}
- };
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - SIMPLE QUERIES
-/*
- bool is_vertex(const Point & p, Vertex_handle & v, Full_cell_handle hint = Full_cell_handle()) const
- {
- Locate_type lt;
- Face f(maximal_dimension());
- Facet ft;
- Full_cell_handle s = locate(p, lt, f, ft, hint);
- if( ON_VERTEX == lt )
- {
- v = s->vertex(f.index(0));
- return true;
- }
- return false;
- }
-
- bool is_vertex(Vertex_const_handle v) const
- {
- return tds().is_vertex(v);
- }
-
- bool is_full_cell(Full_cell_const_handle s) const
- {
- return tds().is_full_cell(s);
- }
-*/
-
- bool is_infinite(Vertex_const_handle v) const
- {
- CGAL_precondition(Vertex_const_handle() != v);
- return (infinite_vertex() == v);
- }
-
- bool is_infinite(const Vertex & v) const /* internal use, not documented */
- {
- return (&(*infinite_vertex()) == &v);
- }
-
- bool is_infinite(Full_cell_const_handle s) const
- {
- CGAL_precondition(Full_cell_const_handle() != s);
- return is_infinite(*s);
- }
- bool is_infinite(const Full_cell & s) const /* internal use, not documented */
- {
- for(int i = 0; i <= current_dimension(); ++i)
- if( is_infinite(s.vertex(i)) )
- return true;
- return false;
- }
- bool is_infinite(const Facet & ft) const
- {
- Full_cell_const_handle s = full_cell(ft);
- CGAL_precondition(s != Full_cell_const_handle());
- if( is_infinite(s) )
- return (s->vertex(index_of_covertex(ft)) != infinite_vertex());
- return false;
- }
-
- bool is_infinite(const Face & f) const
- {
- Full_cell_const_handle s = f.full_cell();
- CGAL_precondition(s != Full_cell_const_handle());
- if( is_infinite(s) )
- {
- Vertex_handle v;
- for( int i(0); i<= f.face_dimension(); ++i)
- if ( is_infinite( f.vertex(i) )) return true;
- }
- return false;
- }
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ELEMENT GATHERING
-
-
- template< typename OutputIterator >
- OutputIterator incident_full_cells(const Face & f, OutputIterator out) const
- {
- return tds().incident_full_cells(f, out);
- }
- template< typename OutputIterator >
- OutputIterator incident_full_cells(Vertex_const_handle v, OutputIterator out) const
- {
- return tds().incident_full_cells(v, out);
- }
- template< typename OutputIterator >
- OutputIterator star(const Face & f, OutputIterator out) const
- {
- return tds().star(f, out);
- }
-
- template< typename OutputIterator >
- OutputIterator incident_faces(Vertex_const_handle v, int d, OutputIterator out) const
- {
- return tds().incident_faces(v, d, out);
- }
- /*
- template< typename OutputIterator, class Comparator >
- OutputIterator incident_upper_faces( Vertex_const_handle v, int d,
- OutputIterator out, Comparator cmp = Comparator())
- {
- return tds().incident_upper_faces(v, d, out, cmp);
- }
- template< typename OutputIterator >
- OutputIterator incident_upper_faces( Vertex_const_handle v, int d,
- OutputIterator out)
- { // FIXME: uncomment this function, since it uses a comparator specific to
- // *geometric* triangulation (taking infinite vertex into account)
- internal::Triangulation::Compare_vertices_for_upper_face<Self> cmp(*this);
- return tds().incident_upper_faces(v, d, out, cmp);
- }
- */
- Orientation orientation(Full_cell_const_handle s, bool in_is_valid = false) const
- {
- if( ! in_is_valid )
- CGAL_assertion( ! is_infinite(s) );
- if( 0 == current_dimension() )
- return POSITIVE;
- if( current_dimension() == maximal_dimension() )
- {
- Orientation_d ori = geom_traits().orientation_d_object();
- return ori(points_begin(s), points_begin(s) + 1 + current_dimension());
- }
- else
- {
- return coaffine_orientation_predicate()(points_begin(s), points_begin(s) + 1 + current_dimension());
- }
- }
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - UPDATE OPERATIONS
-
- void clear()
- {
- tds_.clear();
- infinity_ = tds().insert_increase_dimension();
- // A full_cell has at most 1 + maximal_dimension() facets:
- orientations_.resize(1 + maximal_dimension());
- // Our coaffine orientation predicates HAS state member variables
- reset_flat_orientation();
-#ifdef CGAL_TRIANGULATION_STATISTICS
- walk_size_ = 0;
-#endif
- }
-
- void set_current_dimension(int d)
- {
- tds().set_current_dimension(d);
- }
-
- Full_cell_handle new_full_cell()
- {
- return tds().new_full_cell();
- }
-
- Vertex_handle new_vertex()
- {
- return tds().new_vertex();
- }
-
- Vertex_handle new_vertex(const Point & p)
- {
- return tds().new_vertex(p);
- }
-
- void set_neighbors(Full_cell_handle s, int i, Full_cell_handle s1, int j)
- {
- tds().set_neighbors(s, i, s1, j);
- }
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - VALIDITY
-
- bool is_valid(bool = false, int = 0) const;
- bool are_incident_full_cells_valid(Vertex_const_handle, bool = false, int = 0) const;
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - POINT LOCATION
-
-protected:
- template< typename OrientationPredicate >
- Full_cell_handle do_locate(const Point &, Locate_type &, Face &, Facet &,
- Full_cell_handle start,
- const OrientationPredicate & o) const;
-public:
- Full_cell_handle locate(const Point &, Locate_type &, Face &, Facet &,
- Full_cell_handle start = Full_cell_handle()) const;
- Full_cell_handle locate(const Point &, Locate_type &, Face &, Facet &,
- Vertex_handle) const;
- Full_cell_handle locate(const Point & p, Full_cell_handle s = Full_cell_handle()) const;
- Full_cell_handle locate(const Point & p, Vertex_handle v) const;
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - REMOVALS
-
- Vertex_handle contract_face(const Point &, const Face &);
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - POINT INSERTION
-
- template< typename ForwardIterator >
- size_type insert(ForwardIterator start, ForwardIterator end)
- {
- size_type n = number_of_vertices();
- std::vector<Point> points(start, end);
- spatial_sort(points.begin(), points.end(), geom_traits());
- Full_cell_handle hint = Full_cell_handle();
- typename std::vector<Point>::const_iterator s = points.begin();
- while( s != points.end() )
- {
- hint = insert(*s++, hint)->full_cell();
- }
- return number_of_vertices() - n;
- }
- Vertex_handle insert(const Point &, Locate_type, const Face &, const Facet &, Full_cell_handle);
- Vertex_handle insert(const Point &, Full_cell_handle start = Full_cell_handle());
- Vertex_handle insert(const Point &, Vertex_handle);
- template< typename ForwardIterator >
- Vertex_handle insert_in_hole(const Point & p, ForwardIterator start, ForwardIterator end, const Facet & ft)
- {
- Emptyset_iterator out;
- return insert_in_hole(p, start, end, ft, out);
- }
- template< typename ForwardIterator, typename OutputIterator >
- Vertex_handle insert_in_hole(const Point & p, ForwardIterator start, ForwardIterator end, const Facet & ft,
- OutputIterator out)
- {
- Vertex_handle v = tds().insert_in_hole(start, end, ft, out);
- v->set_point(p);
- return v;
- }
- Vertex_handle insert_in_face(const Point &, const Face &);
- Vertex_handle insert_in_facet(const Point &, const Facet &);
- Vertex_handle insert_in_full_cell(const Point &, Full_cell_handle);
- Vertex_handle insert_outside_convex_hull_1(const Point &, Full_cell_handle);
- Vertex_handle insert_outside_convex_hull(const Point &, Full_cell_handle);
- Vertex_handle insert_outside_affine_hull(const Point &);
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - FACET-TRAVERSAL PREDICATES
-
- template< typename OrientationPredicate >
- class Outside_convex_hull_traversal_predicate
- {
- Triangulation & t_;
- const Point & p_;
- OrientationPredicate const& ori_;
- int cur_dim_;
- public:
- Outside_convex_hull_traversal_predicate(Triangulation & t, const Point & p,
- OrientationPredicate const& ori)
- : t_(t), p_(p), ori_(ori), cur_dim_(t.current_dimension()) {}
- // FUTURE change parameter to const reference
- bool operator()(Facet f) const
- {
- Full_cell_handle s = t_.full_cell(f);
- const int i = t_.index_of_covertex(f);
- Full_cell_handle n = s->neighbor(i);
- if( ! t_.is_infinite(n) )
- return false;
- int inf_v_index = n->index(t_.infinite_vertex());
- n->vertex(inf_v_index)->set_point(p_);
- bool ok = (POSITIVE == ori_(t_.points_begin(n), t_.points_begin(n) + cur_dim_ + 1));
- return ok;
- }
- };
-
- // make sure all full_cells have positive orientation
- void reorient_full_cells();
-
-protected:
- // This is used in the |remove(v)| member function to manage sets of Full_cell_handles
- template< typename FCH >
- struct Full_cell_set : public std::vector<FCH>
- {
- typedef std::vector<FCH> Base_set;
- using Base_set::begin;
- using Base_set::end;
- void make_searchable()
- { // sort the full cell handles
- std::sort(begin(), end());
- }
- bool contains(const FCH & fch) const
- {
- return std::binary_search(begin(), end(), fch);
- }
- bool contains_1st_and_not_2nd(const FCH & fst, const FCH & snd) const
- {
- return ( ! contains(snd) ) && ( contains(fst) );
- }
- };
-
- void display_all_full_cells__debugging() const
- {
- std::cerr << "ALL FULL CELLS:" << std::endl;
- for (Full_cell_const_iterator cit = full_cells_begin() ;
- cit != full_cells_end() ; ++cit )
- {
- std::cerr << std::hex << &*cit << ": ";
- for (int jj = 0 ; jj <= current_dimension() ; ++jj)
- std::cerr << (is_infinite(cit->vertex(jj)) ? 0xFFFFFFFF : (unsigned int)&*cit->vertex(jj)) << " - ";
- std::cerr << std::dec << std::endl;
- }
- std::cerr << std::endl;
- }
-
-
-}; // Triangulation<...>
-
-// = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
-
-// CLASS MEMBER FUNCTIONS
-
-template < class TT, class TDS >
-void
-Triangulation<TT, TDS>
-::reorient_full_cells()
-{
- if( current_dimension() < 1 )
- return;
-
- Full_cell_iterator sit = full_cells_begin();
- Full_cell_iterator send = full_cells_end();
- for ( ; sit != send ; ++sit)
- {
- if( ! (is_infinite(sit) && (1 == current_dimension())) )
- {
- sit->swap_vertices(current_dimension() - 1, current_dimension());
- }
- }
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - - - - - THE REMOVAL METHODS
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::contract_face(const Point & p, const Face & f)
-{
- CGAL_precondition( ! is_infinite(f) );
- Vertex_handle v = tds().contract_face(f);
- v->set_point(p);
- CGAL_expensive_postcondition_msg(are_incident_full_cells_valid(v), "new point is not where it should be");
- return v;
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - - - - - THE INSERTION METHODS
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert(const Point & p, Locate_type lt, const Face & f, const Facet & ft, Full_cell_handle s)
-{
- switch( lt )
- {
- case IN_FULL_CELL:
- return insert_in_full_cell(p, s);
- break;
- case OUTSIDE_CONVEX_HULL:
- return insert_outside_convex_hull(p, s);
- break;
- case OUTSIDE_AFFINE_HULL:
- return insert_outside_affine_hull(p);
- break;
- case IN_FACET:
- {
- return insert_in_facet(p, ft);
- break;
- }
- case IN_FACE:
- return insert_in_face(p, f);
- break;
- case ON_VERTEX:
- s->vertex(f.index(0))->set_point(p);
- return s->vertex(f.index(0));
- break;
- }
- CGAL_assertion(false);
- return Vertex_handle();
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert(const Point & p, Full_cell_handle start)
-{
- Locate_type lt;
- Face f(maximal_dimension());
- Facet ft;
- Full_cell_handle s = locate(p, lt, f, ft, start);
- return insert(p, lt, f, ft, s);
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert(const Point & p, Vertex_handle v)
-{
- if( Vertex_handle() == v )
- v = infinite_vertex();
- return insert(p, v->full_cell());
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert_in_face(const Point & p, const Face & f)
-{
- CGAL_precondition( ! is_infinite(f) );
- Vertex_handle v = tds().insert_in_face(f);
- v->set_point(p);
- return v;
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert_in_facet(const Point & p, const Facet & ft)
-{
- CGAL_precondition( ! is_infinite(ft) );
- Vertex_handle v = tds().insert_in_facet(ft);
- v->set_point(p);
- return v;
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert_in_full_cell(const Point & p, Full_cell_handle s)
-{
- CGAL_precondition( ! is_infinite(s) );
- Vertex_handle v = tds().insert_in_full_cell(s);
- v->set_point(p);
- return v;
-}
-
-// NOT DOCUMENTED...
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert_outside_convex_hull_1(const Point & p, Full_cell_handle s)
-{
- // This is a special case for dimension 1, because in that case, the right
- // infinite full_cell is not correctly oriented... (sice its first vertex is the
- // infinite one...
- CGAL_precondition( is_infinite(s) );
- CGAL_precondition( 1 == current_dimension() );
- Vertex_handle v = tds().insert_in_full_cell(s);
- v->set_point(p);
- return v;
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert_outside_convex_hull(const Point & p, Full_cell_handle s)
-{
- if( 1 == current_dimension() )
- {
- return insert_outside_convex_hull_1(p, s);
- }
- CGAL_precondition( is_infinite(s) );
- CGAL_assertion( current_dimension() >= 2 );
- std::vector<Full_cell_handle> simps;
- simps.reserve(64);
- std::back_insert_iterator<std::vector<Full_cell_handle> > out(simps);
- if( current_dimension() < maximal_dimension() )
- {
- Coaffine_orientation_d ori = coaffine_orientation_predicate();
- Outside_convex_hull_traversal_predicate<Coaffine_orientation_d>
- ochtp(*this, p, ori);
- tds().gather_full_cells(s, ochtp, out);
- }
- else
- {
- Orientation_d ori = geom_traits().orientation_d_object();
- Outside_convex_hull_traversal_predicate<Orientation_d>
- ochtp(*this, p, ori);
- tds().gather_full_cells(s, ochtp, out);
- }
- int inf_v_index = s->index(infinite_vertex());
- Vertex_handle v = insert_in_hole(
- p, simps.begin(), simps.end(), Facet(s, inf_v_index));
- return v;
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Vertex_handle
-Triangulation<TT, TDS>
-::insert_outside_affine_hull(const Point & p)
-{
- CGAL_precondition( current_dimension() < maximal_dimension() );
- Vertex_handle v = tds().insert_increase_dimension(infinite_vertex());
- // reset the orientation predicate:
- reset_flat_orientation();
- v->set_point(p);
- if( current_dimension() >= 1 )
- {
- Full_cell_handle inf_v_cell = infinite_vertex()->full_cell();
- int inf_v_index = inf_v_cell->index(infinite_vertex());
- Full_cell_handle s = inf_v_cell->neighbor(inf_v_index);
- Orientation o = orientation(s);
- CGAL_assertion( COPLANAR != o );
- if( NEGATIVE == o )
- reorient_full_cells();
-
-
- // We just inserted the second finite point and the right infinite
- // cell is like : (inf_v, v), but we want it to be (v, inf_v) to be
- // consistent with the rest of the cells
- if (current_dimension() == 1)
- {
- // Is "inf_v_cell" the right infinite cell?
- // Then inf_v_index should be 1
- if (inf_v_cell->neighbor(inf_v_index)->index(inf_v_cell) == 0
- && inf_v_index == 0)
- {
- inf_v_cell->swap_vertices(
- current_dimension() - 1, current_dimension());
- }
- // Otherwise, let's find the right infinite cell
- else
- {
- inf_v_cell = inf_v_cell->neighbor((inf_v_index + 1) % 2);
- inf_v_index = inf_v_cell->index(infinite_vertex());
- // Is "inf_v_cell" the right infinite cell?
- // Then inf_v_index should be 1
- if (inf_v_cell->neighbor(inf_v_index)->index(inf_v_cell) == 0
- && inf_v_index == 0)
- {
- inf_v_cell->swap_vertices(
- current_dimension() - 1, current_dimension());
- }
- }
- }
- }
- return v;
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - THE MAIN LOCATE(...) FUNCTION
-
-template < class TT, class TDS >
-template< typename OrientationPredicate >
-typename Triangulation<TT, TDS>::Full_cell_handle
-Triangulation<TT, TDS>
-::do_locate(const Point & p, // query point
- Locate_type & loc_type,// type of result (full_cell, face, vertex)
- Face & face,// the face containing the query in its interior (when appropriate)
- Facet & facet,// the facet containing the query in its interior (when appropriate)
- Full_cell_handle start, // starting full_cell for the walk
- OrientationPredicate const& orientation_pred
- ) const
-{
- const int cur_dim = current_dimension();
-
- if( cur_dim == -1 )
- {
- loc_type = OUTSIDE_AFFINE_HULL;
- return Full_cell_handle();
- }
- else if( cur_dim == 0 )
- {
- Vertex_handle vit = infinite_full_cell()->neighbor(0)->vertex(0);
- if( EQUAL != geom_traits().compare_lexicographically_d_object()(p, vit->point()) )
- {
- loc_type = OUTSIDE_AFFINE_HULL;
- return Full_cell_handle();
- }
- else
- {
- loc_type = ON_VERTEX;
- face.set_full_cell(vit->full_cell());
- face.set_index(0, 0);
- return vit->full_cell();
- }
- }
-
- Full_cell_handle s;
-
- // if we don't know where to start, we start from any bounded full_cell
- if( Full_cell_handle() == start )
- {
- // THE HACK THAT NOBODY SHOULD DO... BUT DIFFICULT TO WORK AROUND
- // THIS... TODO: WORK AROUND IT
- Full_cell_handle inf_c = const_cast<Self*>(this)->infinite_full_cell();
- int inf_v_index = inf_c->index(infinite_vertex());
- s = inf_c->neighbor(inf_v_index);
- }
- else
- {
- s = start;
- if( is_infinite(s) )
- {
- int inf_v_index = s->index(infinite_vertex());
- s = s->neighbor(inf_v_index);
- }
- }
-
- // Check if query |p| is outside the affine hull
- if( cur_dim < maximal_dimension() )
- {
- if( ! geom_traits().contained_in_affine_hull_d_object()(
- points_begin(s),
- points_begin(s) + current_dimension() + 1,
- p) )
- {
- loc_type = OUTSIDE_AFFINE_HULL;
- return Full_cell_handle();
- }
- }
-
- // we remember the |previous|ly visited full_cell to avoid the evaluation
- // of one |orientation| predicate
- Full_cell_handle previous = Full_cell_handle();
- bool full_cell_not_found = true;
- while(full_cell_not_found) // we walk until we locate the query point |p|
- {
- #ifdef CGAL_TRIANGULATION_STATISTICS
- ++walk_size_;
- #endif
- // For the remembering stochastic walk, we need to start trying
- // with a random index:
- int j, i = rng_.get_int(0, cur_dim);
- // we check |p| against all the full_cell's hyperplanes in turn
-
- for(j = 0; j <= cur_dim; ++j, i = (i + 1) % (cur_dim + 1) )
- {
- Full_cell_handle next = s->neighbor(i);
- if( previous == next )
- { // no need to compute the orientation, we already know it
- orientations_[i] = POSITIVE;
- continue; // go to next full_cell's facet
- }
-
- Substitute_point_in_vertex_iterator<
- typename Full_cell::Vertex_handle_const_iterator>
- spivi(s->vertex(i), &p);
-
- orientations_[i] = orientation_pred(
- boost::make_transform_iterator(s->vertices_begin(), spivi),
- boost::make_transform_iterator(s->vertices_begin() + cur_dim + 1,
- spivi));
-
- if( orientations_[i] != NEGATIVE )
- {
- // from this facet's point of view, we are inside the
- // full_cell or on its boundary, so we continue to next facet
- continue;
- }
-
- // At this point, we know that we have to jump to the |next|
- // full_cell because orientation_[i] == NEGATIVE
- previous = s;
- s = next;
- if( is_infinite(next) )
- { // we have arrived OUTSIDE the convex hull of the triangulation,
- // so we stop the search
- full_cell_not_found = false;
- loc_type = OUTSIDE_CONVEX_HULL;
- face.set_full_cell(s);
- }
- break;
- } // end of the 'for' loop
- if( ( cur_dim + 1 ) == j ) // we found the full_cell containing |p|
- full_cell_not_found = false;
- }
- // Here, we know in which full_cell |p| is in.
- // We now check more precisely where |p| landed:
- // vertex, facet, face or full_cell.
- if( ! is_infinite(s) )
- {
- face.set_full_cell(s);
- int num(0);
- int verts(0);
- for(int i = 0; i < cur_dim; ++i)
- {
- if( orientations_[i] == COPLANAR )
- {
- ++num;
- facet = Facet(s, i);
- }
- else
- face.set_index(verts++, i);
- }
- //-- We could put the if{}else{} below in the loop above, but then we would
- // need to test if (verts < cur_dim) many times... we do it only once
- // here:
- if( orientations_[cur_dim] == COPLANAR )
- {
- ++num;
- facet = Facet(s, cur_dim);
- }
- else if( verts < cur_dim )
- face.set_index(verts, cur_dim);
- //-- end of remark above //
- if( 0 == num )
- {
- loc_type = IN_FULL_CELL;
- face.clear();
- }
- else if( cur_dim == num )
- loc_type = ON_VERTEX;
- else if( 1 == num )
- loc_type = IN_FACET;
- else
- loc_type = IN_FACE;
- }
- return s;
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Full_cell_handle
-Triangulation<TT, TDS>
-::locate( const Point & p, // query point
- Locate_type & loc_type,// type of result (full_cell, face, vertex)
- Face & face,// the face containing the query in its interior (when appropriate)
- Facet & facet,// the facet containing the query in its interior (when appropriate)
- Full_cell_handle start// starting full_cell for the walk
- ) const
-{
- if( current_dimension() == maximal_dimension() )
- {
- Orientation_d ori = geom_traits().orientation_d_object();
- return do_locate(p, loc_type, face, facet, start, ori);
- }
- else
- return do_locate(p, loc_type, face, facet, start, coaffine_orientation_predicate());
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - the locate(...) variants
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Full_cell_handle
-Triangulation<TT, TDS>
-::locate( const Point & p,
- Locate_type & loc_type,
- Face & face,
- Facet & facet,
- Vertex_handle start) const
-{
- if( Vertex_handle() == start )
- start = infinite_vertex();
- return locate(p, loc_type, face, facet, start->full_cell());
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Full_cell_handle
-Triangulation<TT, TDS>
-::locate(const Point & p, Full_cell_handle s) const
-{
- Locate_type lt;
- Face face(maximal_dimension());
- Facet facet;
- return locate(p, lt, face, facet, s);
-}
-
-template < class TT, class TDS >
-typename Triangulation<TT, TDS>::Full_cell_handle
-Triangulation<TT, TDS>
-::locate(const Point & p, Vertex_handle v) const
-{
- if( Vertex_handle() != v )
- v = infinite_vertex();
- return this->locate(p, v->full_cell());
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - VALIDITY
-
-template < class TT, class TDS >
-bool
-Triangulation<TT, TDS>
-::is_valid(bool verbose, int level) const
-{
- if( ! tds().is_valid(verbose, level) )
- return false;
-
- Full_cell_const_iterator c;
- if( current_dimension() < 0 )
- return true;
- Orientation o;
- for( c = full_cells_begin(); c != full_cells_end(); ++c )
- {
- if( is_infinite(c) )
- {
- if( current_dimension() > 1 )
- {
- int i = c->index( infinite_vertex() );
- Full_cell_handle n = c->neighbor(i);
- infinite_vertex()->set_point(n->vertex(c->mirror_index(i))->point());
- o = - orientation(c, true);
- }
- else
- o = POSITIVE;
- }
- else
- o = orientation(c, true);
- if( NEGATIVE == o )
- {
- if( verbose ) CGAL_warning_msg(false, "full_cell is not correctly oriented");
- return false;
- }
- if( COPLANAR == o )
- {
- if( verbose ) CGAL_warning_msg(false, "full_cell is flat");
- return false;
- }
- }
- return true;
-}
-
-template < class TT, class TDS >
-bool Triangulation<TT, TDS>::are_incident_full_cells_valid(Vertex_const_handle v, bool verbose, int) const
-{
- if( current_dimension() <= 0 )
- return true;
- typedef std::vector<Full_cell_const_handle> Simps;
- Simps simps;
- simps.reserve(64);
- std::back_insert_iterator<Simps> out(simps);
- incident_full_cells(v, out);
- typename Simps::const_iterator sit = simps.begin();
- for( ; sit != simps.end(); ++sit )
- {
- if( is_infinite(*sit) )
- continue;
- Orientation o = orientation(*sit);
- if( NEGATIVE == o )
- {
- if( verbose ) CGAL_warning_msg(false, "full_cell is not correctly oriented");
- return false;
- }
- if( COPLANAR == o )
- {
- if( verbose ) CGAL_warning_msg(false, "full_cell is flat");
- return false;
- }
- }
- return true;
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-
-// FUNCTIONS THAT ARE NOT MEMBER FUNCTIONS:
-
-template < class TT, class TDS >
-std::istream &
-operator>>(std::istream & is, Triangulation<TT, TDS> & tr)
- // reads :
- // - the dimensions (maximal and current)
- // - the number of finite vertices
- // - the non combinatorial information on vertices (point, etc)
- // - the number of full_cells
- // - the full_cells by the indices of their vertices in the preceding list
- // of vertices, plus the non combinatorial information on each full_cell
- // - the neighbors of each full_cell by their index in the preceding list
-{
- typedef Triangulation<TT, TDS> T;
- typedef typename T::Vertex_handle Vertex_handle;
-
- // read current dimension and number of vertices
- size_t n;
- int cd;
- if( is_ascii(is) )
- is >> cd >> n;
- else
- {
- read(is, cd);
- read(is, n, io_Read_write());
- }
-
- CGAL_assertion_msg( cd <= tr.maximal_dimension(), "input Triangulation has too high dimension");
-
- tr.clear();
- tr.set_current_dimension(cd);
-
- if( n == 0 )
- return is;
-
- std::vector<Vertex_handle> vertices;
- vertices.resize(n+1);
- vertices[0] = tr.infinite_vertex();
- is >> (*vertices[0]);
-
- // read the vertices:
- size_t i(1);
- while( i <= n )
- {
- vertices[i] = tr.new_vertex();
- is >> (*vertices[i]); // read a vertex
- ++i;
- }
-
- // now, read the combinatorial information
- return tr.tds().read_full_cells(is, vertices);
-}
-
-template < class TT, class TDS >
-std::ostream &
-operator<<(std::ostream & os, const Triangulation<TT, TDS> & tr)
- // writes :
- // - the dimensions (maximal and current)
- // - the number of finite vertices
- // - the non combinatorial information on vertices (point, etc)
- // - the number of full_cells
- // - the full_cells by the indices of their vertices in the preceding list
- // of vertices, plus the non combinatorial information on each full_cell
- // - the neighbors of each full_cell by their index in the preceding list
-{
- typedef Triangulation<TT, TDS> T;
- typedef typename T::Vertex_const_handle Vertex_handle;
- typedef typename T::Vertex_const_iterator Vertex_iterator;
-
- // outputs dimensions and number of vertices
- size_t n = tr.number_of_vertices();
- if( is_ascii(os) )
- os << tr.current_dimension() << std::endl << n << std::endl;
- else
- {
- write(os, tr.current_dimension());
- write(os, n, io_Read_write());
- }
-
- if( n == 0 )
- return os;
-
- size_t i(0);
- // write the vertices
- std::map<Vertex_handle, int> index_of_vertex;
-
- // infinite vertex has index 0 (among all the vertices)
- index_of_vertex[tr.infinite_vertex()] = i++;
- os << *tr.infinite_vertex();
- for( Vertex_iterator it = tr.vertices_begin(); it != tr.vertices_end(); ++it )
- {
- if( tr.is_infinite(it) )
- continue;
- os << *it; // write the vertex
- index_of_vertex[it] = i++;
- }
- CGAL_assertion( i == n+1 );
-
- // output the combinatorial information
- return tr.tds().write_full_cells(os, index_of_vertex);
-}
-
-} //namespace CGAL
-
-#endif // CGAL_TRIANGULATION_H
diff --git a/include/gudhi_patches/CGAL/Triangulation_data_structure.h b/include/gudhi_patches/CGAL/Triangulation_data_structure.h
deleted file mode 100644
index 2493c712..00000000
--- a/include/gudhi_patches/CGAL/Triangulation_data_structure.h
+++ /dev/null
@@ -1,1603 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TRIANGULATION_DATA_STRUCTURE_H
-#define CGAL_TRIANGULATION_DATA_STRUCTURE_H
-
-#include <CGAL/basic.h>
-#include <CGAL/Default.h>
-#include <CGAL/iterator.h>
-#include <CGAL/Compact_container.h>
-#include <CGAL/Triangulation_face.h>
-#include <CGAL/Triangulation_ds_vertex.h>
-#include <CGAL/Triangulation_ds_full_cell.h>
-#include <CGAL/internal/Combination_enumerator.h>
-#include <CGAL/internal/Triangulation/utilities.h>
-#include <CGAL/internal/Triangulation/Triangulation_ds_iterators.h>
-
-#include <algorithm>
-#include <vector>
-#include <queue>
-#include <set>
-
-namespace CGAL {
-
-template< class Dimen,
- class Vb = Default,
- class Fcb = Default >
-class Triangulation_data_structure
-{
- typedef Triangulation_data_structure<Dimen, Vb, Fcb> Self;
- typedef typename Default::Get<Vb, Triangulation_ds_vertex<> >::type V_base;
- typedef typename Default::Get<Fcb, Triangulation_ds_full_cell<> >::type FC_base;
-
-public:
- typedef typename V_base::template Rebind_TDS<Self>::Other Vertex; /* Concept */
- typedef typename FC_base::template Rebind_TDS<Self>::Other Full_cell; /* Concept */
-
- // Tools to change the Vertex and Cell types of the TDS.
- template < typename Vb2 >
- struct Rebind_vertex {
- typedef Triangulation_data_structure<Dimen, Vb2, Fcb> Other;
- };
-
- template < typename Fcb2 >
- struct Rebind_full_cell {
- typedef Triangulation_data_structure<Dimen, Vb, Fcb2> Other;
- };
-
-
-
- // we want to store an object of this class in every Full_cell:
- class Full_cell_data
- {
- unsigned char bits_;
- public:
- Full_cell_data() : bits_(0) {}
- Full_cell_data(const Full_cell_data & fcd) : bits_(fcd.bits_) {}
-
- void clear() { bits_ = 0; }
- void mark_visited() { bits_ = 1; }
- void clear_visited() { bits_ = 0; }
-
- bool is_clear() const { return bits_ == 0; }
- bool is_visited() const { return bits_ == 1; }
- // WARNING: if we use more bits and several bits can be set at once,
- // then make sure to use bitwise operation above, instead of direct
- // affectation.
- };
-
-protected:
- typedef Compact_container<Vertex> Vertex_container;
- typedef Compact_container<Full_cell> Full_cell_container;
-
-public:
- typedef Dimen Maximal_dimension;
-
- typedef typename Vertex_container::size_type size_type; /* Concept */
- typedef typename Vertex_container::difference_type difference_type; /* Concept */
-
- typedef typename Vertex_container::iterator Vertex_handle; /* Concept */
- typedef typename Vertex_container::iterator Vertex_iterator; /* Concept */
- typedef typename Vertex_container::const_iterator Vertex_const_handle;
- typedef typename Vertex_container::const_iterator Vertex_const_iterator;
-
- typedef typename Full_cell_container::iterator Full_cell_handle; /* Concept */
- typedef typename Full_cell_container::iterator Full_cell_iterator; /* Concept */
- typedef typename Full_cell_container::const_iterator Full_cell_const_handle;
- typedef typename Full_cell_container::const_iterator Full_cell_const_iterator;
-
- typedef internal::Triangulation::
- Triangulation_ds_facet_iterator<Self> Facet_iterator; /* Concept */
-
- /* The 2 types defined below, |Facet| and |Rotor| are used when traversing
- the boundary `B' of the union of a set of full cells. |Rotor| makes it
- easy to rotate around itself, in the search of neighbors in `B' (see
- |rotate_rotor| and |insert_in_tagged_hole|) */
-
- // A co-dimension 1 sub-simplex.
- class Facet /* Concept */
- {
- Full_cell_handle full_cell_;
- int index_of_covertex_;
- public:
- Facet() : full_cell_(), index_of_covertex_(0) {}
- Facet(Full_cell_handle f, int i) : full_cell_(f), index_of_covertex_(i) {}
- Full_cell_handle full_cell() const { return full_cell_; }
- int index_of_covertex() const { return index_of_covertex_; }
- };
-
- // A co-dimension 2 sub-simplex. called a Rotor because we can rotate
- // the two "covertices" around the sub-simplex. Useful for traversing the
- // boundary of a hole. NOT DOCUMENTED
- class Rotor : public Facet
- {
- int index_of_second_covertex_;
- public:
- Rotor() : Facet(), index_of_second_covertex_(0) {}
- Rotor(Full_cell_handle f, int first, int second) : Facet(f, first), index_of_second_covertex_(second) {}
- int index_of_second_covertex() const { return index_of_second_covertex_; }
- };
-
- typedef Triangulation_face<Self> Face; /* Concept */
-
-protected: // DATA MEMBERS
-
- int dmax_, dcur_; // dimension of the current triangulation
- Vertex_container vertices_; // list of all vertices
- Full_cell_container full_cells_; // list of all full cells
-
-private:
-
- void clean_dynamic_memory()
- {
- vertices_.clear();
- full_cells_.clear();
- }
-
- template < class Dim_tag >
- struct get_maximal_dimension
- {
- static int value(int D) { return D; }
- };
- // specialization
- template < int D >
- struct get_maximal_dimension<Dimension_tag<D> >
- {
- static int value(int) { return D; }
- };
-
-public:
- Triangulation_data_structure( int dim=0) /* Concept */
- : dmax_(get_maximal_dimension<Dimen>::value(dim)), dcur_(-2),
- vertices_(), full_cells_()
- {
- CGAL_assertion_msg(dmax_ > 0, "maximal dimension must be positive.");
- }
-
- ~Triangulation_data_structure()
- {
- clean_dynamic_memory();
- }
-
- Triangulation_data_structure(const Triangulation_data_structure & tds)
- : dmax_(tds.dmax_), dcur_(tds.dcur_),
- vertices_(tds.vertices_), full_cells_(tds.full_cells_)
- {
- typedef std::map<Vertex_const_handle, Vertex_handle> V_map;
- typedef std::map<Full_cell_const_handle, Full_cell_handle> C_map;
- V_map vmap;
- C_map cmap;
- Vertex_const_iterator vfrom = tds.vertices_begin();
- Vertex_iterator vto = vertices_begin();
- Full_cell_const_iterator cfrom = tds.full_cells_begin();
- Full_cell_iterator cto = full_cells_begin();
- while( vfrom != tds.vertices_end() )
- vmap[vfrom++] = vto++;
- while( cfrom != tds.full_cells_end() )
- cmap[cfrom++] = cto++;
- cto = full_cells_begin();
- while( cto != full_cells_end() )
- {
- for( int i = 0; i <= (std::max)(0, current_dimension()); ++i )
- {
- associate_vertex_with_full_cell(cto, i, vmap[cto->vertex(i)]);
- cto->set_neighbor(i, cmap[cto->neighbor(i)]);
- }
- ++cto;
- }
- }
-
- // QUERIES
-
-protected:
-
- bool check_range(int i) const
- {
- if( current_dimension() < 0 )
- {
- return (0 == i);
- }
- return ( (0 <= i) && (i <= current_dimension()) );
- }
-
-public:
-
- /* returns the current dimension of the full cells in the triangulation. */
- int maximal_dimension() const { return dmax_; } /* Concept */
- int current_dimension() const { return dcur_; } /* Concept */
-
- size_type number_of_vertices() const /* Concept */
- {
- return this->vertices_.size();
- }
- size_type number_of_full_cells() const /* Concept */
- {
- return this->full_cells_.size();
- }
-
- bool empty() const /* Concept */
- {
- return current_dimension() == -2;
- }
-
- Vertex_container & vertices() { return vertices_; }
- const Vertex_container & vertices() const { return vertices_; }
- Full_cell_container & full_cells() { return full_cells_; }
- const Full_cell_container & full_cells() const { return full_cells_; }
-
- Vertex_handle vertex(Full_cell_handle s, int i) const /* Concept */
- {
- CGAL_precondition(s != Full_cell_handle() && check_range(i));
- return s->vertex(i);
- }
-
- Vertex_const_handle vertex(Full_cell_const_handle s, int i) const /* Concept */
- {
- CGAL_precondition(s != Full_cell_handle() && check_range(i));
- return s->vertex(i);
- }
-
- bool is_vertex(Vertex_const_handle v) const /* Concept */
- {
- if( Vertex_const_handle() == v )
- return false;
- Vertex_const_iterator vit = vertices_begin();
- while( vit != vertices_end() && ( v != vit ) )
- ++vit;
- return v == vit;
- }
-
- bool is_full_cell(Full_cell_const_handle s) const /* Concept */
- {
- if( Full_cell_const_handle() == s )
- return false;
- Full_cell_const_iterator sit = full_cells_begin();
- while( sit != full_cells_end() && ( s != sit ) )
- ++sit;
- return s == sit;
- }
-
- Full_cell_handle full_cell(Vertex_handle v) const /* Concept */
- {
- CGAL_precondition(v != Vertex_handle());
- return v->full_cell();
- }
-
- Full_cell_const_handle full_cell(Vertex_const_handle v) const /* Concept */
- {
- CGAL_precondition(Vertex_const_handle() != v);
- return v->full_cell();
- }
-
- Full_cell_handle neighbor(Full_cell_handle s, int i) const /* Concept */
- {
- CGAL_precondition(Full_cell_handle() != s && check_range(i));
- return s->neighbor(i);
- }
-
- Full_cell_const_handle neighbor(Full_cell_const_handle s, int i) const/* Concept */
- {
- CGAL_precondition(Full_cell_const_handle() != s && check_range(i));
- return s->neighbor(i);
- }
-
- int mirror_index(Full_cell_handle s, int i) const /* Concept */
- {
- CGAL_precondition(Full_cell_handle() != s && check_range(i));
- return s->mirror_index(i);
- }
-
- int mirror_index(Full_cell_const_handle s, int i) const
- {
- CGAL_precondition(Full_cell_const_handle() != s && check_range(i)); /* Concept */
- return s->mirror_index(i);
- }
-
- int mirror_vertex(Full_cell_handle s, int i) const /* Concept */
- {
- CGAL_precondition(Full_cell_handle() != s && check_range(i));
- return s->mirror_vertex(i);
- }
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - FACETS OPERATIONS
-
- // works for Face_ = Facet and Face_ = Rotor.
- // NOT DOCUMENTED for the Rotor case...
- template< typename Face_ >
- Full_cell_handle full_cell(const Face_ & f) const /* Concept */
- {
- return f.full_cell();
- }
-
- // works for Face_ = Facet and Face_ = Rotor.
- // NOT DOCUMENTED for the Rotor case...
- template< class Face_ >
- int index_of_covertex(const Face_ & f) const /* Concept */
- {
- return f.index_of_covertex();
- }
-
- // NOT DOCUMENTED
- // A Rotor has two covertices
- int index_of_second_covertex(const Rotor & f) const
- {
- return f.index_of_second_covertex();
- }
-
- // works for Face_ = Facet and Face_ = Rotor.
- // NOT DOCUMENTED...
- template< class Face_ >
- bool is_boundary_facet(const Face_ & f) const
- {
- if( get_visited(neighbor(full_cell(f), index_of_covertex(f))) )
- return false;
- if( ! get_visited(full_cell(f)) )
- return false;
- return true;
- }
-
- // NOT DOCUMENTED...
- Rotor rotate_rotor(Rotor & f)
- {
- int opposite = mirror_index(full_cell(f), index_of_covertex(f));
- Full_cell_handle s = neighbor(full_cell(f), index_of_covertex(f));
- int new_second = s->index(vertex(full_cell(f), index_of_second_covertex(f)));
- return Rotor(s, new_second, opposite);
- }
-
- // NICE UPDATE OPERATIONS
-
-protected:
- void do_insert_increase_dimension(Vertex_handle, Vertex_handle);
-public:
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - REMOVALS
-
- Vertex_handle collapse_face(const Face &); /* Concept */
- void remove_decrease_dimension(Vertex_handle, Vertex_handle); /* Concept */
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - INSERTIONS
-
- Vertex_handle insert_in_full_cell(Full_cell_handle); /* Concept */
- Vertex_handle insert_in_face(const Face &); /* Concept */
- Vertex_handle insert_in_facet(const Facet &); /* Concept */
- template< typename Forward_iterator >
- Vertex_handle insert_in_hole(Forward_iterator, Forward_iterator, Facet); /* Concept */
- template< typename Forward_iterator, typename OutputIterator >
- Vertex_handle insert_in_hole(Forward_iterator, Forward_iterator, Facet, OutputIterator); /* Concept */
-
- template< typename OutputIterator >
- Full_cell_handle insert_in_tagged_hole(Vertex_handle, Facet, OutputIterator);
-
- Vertex_handle insert_increase_dimension(Vertex_handle=Vertex_handle()); /* Concept */
-
-private:
-
- // Used by insert_in_tagged_hole
- struct IITH_task
- {
- IITH_task(
- Facet boundary_facet_,
- int index_of_inside_cell_in_outside_cell_,
- Full_cell_handle future_neighbor_ = Full_cell_handle(),
- int new_cell_index_in_future_neighbor_ = -1,
- int index_of_future_neighbor_in_new_cell_ = -1)
- : boundary_facet(boundary_facet_),
- index_of_inside_cell_in_outside_cell(index_of_inside_cell_in_outside_cell_),
- future_neighbor(future_neighbor_),
- new_cell_index_in_future_neighbor(new_cell_index_in_future_neighbor_),
- index_of_future_neighbor_in_new_cell(index_of_future_neighbor_in_new_cell_)
- {}
-
- // "new_cell" is the cell about to be created
- Facet boundary_facet;
- int index_of_inside_cell_in_outside_cell;
- Full_cell_handle future_neighbor;
- int new_cell_index_in_future_neighbor;
- int index_of_future_neighbor_in_new_cell;
- };
-
- // NOT DOCUMENTED
- void clear_visited_marks(Full_cell_handle) const;
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - DANGEROUS UPDATE OPERATIONS
-
-private:
-
- // NOT DOCUMENTED
- template< typename FCH > // FCH = Full_cell_[const_]handle
- bool get_visited(FCH c) const
- {
- return c->tds_data().is_visited();
- }
-
- // NOT DOCUMENTED
- template< typename FCH > // FCH = Full_cell_[const_]handle
- void set_visited(FCH c, bool m) const
- {
- if( m )
- c->tds_data().mark_visited();
- else
- c->tds_data().clear_visited();
- }
-
-public:
-
- void clear() /* Concept */
- {
- clean_dynamic_memory();
- dcur_ = -2;
- }
-
- void set_current_dimension(int d) /* Concept */
- {
- CGAL_precondition(-2<=d && d<=maximal_dimension());
- dcur_ = d;
- }
-
- Full_cell_handle new_full_cell(Full_cell_handle s)
- {
- return full_cells_.emplace(*s);
- }
-
- Full_cell_handle new_full_cell() /* Concept */
- {
- return full_cells_.emplace(dmax_);
- }
-
- void delete_full_cell(Full_cell_handle s) /* Concept */
- {
- CGAL_precondition(Full_cell_handle() != s);
- // CGAL_expensive_precondition(is_full_cell(s));
- full_cells_.erase(s);
- }
-
- template< typename Forward_iterator >
- void delete_full_cells(Forward_iterator start, Forward_iterator end) /* Concept */
- {
- Forward_iterator s = start;
- while( s != end )
- full_cells_.erase(*s++);
- }
-
- template< class T >
- Vertex_handle new_vertex( const T & t )
- {
- return vertices_.emplace(t);
- }
-
- Vertex_handle new_vertex() /* Concept */
- {
- return vertices_.emplace();
- }
-
- void delete_vertex(Vertex_handle v) /* Concept */
- {
- CGAL_precondition( Vertex_handle() != v );
- vertices_.erase(v);
- }
-
- void associate_vertex_with_full_cell(Full_cell_handle s, int i, Vertex_handle v) /* Concept */
- {
- CGAL_precondition(check_range(i));
- CGAL_precondition(s != Full_cell_handle());
- CGAL_precondition(v != Vertex_handle());
- s->set_vertex(i, v);
- v->set_full_cell(s);
- }
-
- void set_neighbors(Full_cell_handle s, int i, Full_cell_handle s1, int j) /* Concept */
- {
- CGAL_precondition(check_range(i));
- CGAL_precondition(check_range(j));
- CGAL_precondition(s != Full_cell_handle());
- CGAL_precondition(s1 != Full_cell_handle());
- s->set_neighbor(i, s1);
- s1->set_neighbor(j, s);
- s->set_mirror_index(i, j);
- s1->set_mirror_index(j, i);
- }
-
- // SANITY CHECKS
-
- bool is_valid(bool = true, int = 0) const; /* Concept */
-
- // NOT DOCUMENTED
- template< class OutStream> void write_graph(OutStream &);
-
- Vertex_iterator vertices_begin() { return vertices_.begin(); } /* Concept */
- Vertex_iterator vertices_end() { return vertices_.end(); } /* Concept */
- Full_cell_iterator full_cells_begin() { return full_cells_.begin(); } /* Concept */
- Full_cell_iterator full_cells_end() { return full_cells_.end(); } /* Concept */
-
- Vertex_const_iterator vertices_begin() const { return vertices_.begin(); } /* Concept */
- Vertex_const_iterator vertices_end() const { return vertices_.end(); } /* Concept */
- Full_cell_const_iterator full_cells_begin() const { return full_cells_.begin(); } /* Concept */
- Full_cell_const_iterator full_cells_end() const { return full_cells_.end(); } /* Concept */
-
- Facet_iterator facets_begin() /* Concept */
- {
- if( current_dimension() <= 0 )
- return facets_end();
- return Facet_iterator(*this);
- }
- Facet_iterator facets_end() /* Concept */
- {
- return Facet_iterator(*this, 0);
- }
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - FULL CELL GATHERING
-
- // a traversal predicate for gathering full_cells incident to a given face
- // ``incident'' means that the given face is a subface of the full_cell
- class Incident_full_cell_traversal_predicate
- {
- const Face & f_;
- int dim_;
- const Triangulation_data_structure & tds_;
- public:
- Incident_full_cell_traversal_predicate(const Triangulation_data_structure & tds,
- const Face & f)
- : f_(f), tds_(tds)
- {
- dim_ = f.face_dimension();
- }
- bool operator()(const Facet & facet) const
- {
- Vertex_handle v = tds_.full_cell(facet)->vertex(tds_.index_of_covertex(facet));
- for( int i = 0; i <= dim_; ++i )
- {
- if( v == f_.vertex(i) )
- return false;
- }
- return true;
- }
- };
-
- // a traversal predicate for gathering full_cells having a given face as subface
- class Star_traversal_predicate
- {
- const Face & f_;
- int dim_;
- const Triangulation_data_structure & tds_;
- public:
- Star_traversal_predicate(const Triangulation_data_structure & tds,
- const Face & f)
- : f_(f), tds_(tds)
- {
- dim_ = f.face_dimension();
- }
- bool operator()(const Facet & facet) const
- {
- Full_cell_handle s = tds_.full_cell(facet)->neighbor(tds_.index_of_covertex(facet));
- for( int j = 0; j <= tds_.current_dimension(); ++j )
- {
- for( int i = 0; i <= dim_; ++i )
- if( s->vertex(j) == f_.vertex(i) )
- return true;
- }
- return false;
- }
- };
-
- template< typename TraversalPredicate, typename OutputIterator >
- Facet gather_full_cells(Full_cell_handle, TraversalPredicate &, OutputIterator &) const; /* Concept */
- template< typename OutputIterator >
- OutputIterator incident_full_cells(const Face &, OutputIterator) const; /* Concept */
- template< typename OutputIterator >
- OutputIterator incident_full_cells(Vertex_const_handle, OutputIterator) const; /* Concept */
- template< typename OutputIterator >
- OutputIterator star(const Face &, OutputIterator) const; /* Concept */
-#ifndef CGAL_CFG_NO_CPP0X_DEFAULT_TEMPLATE_ARGUMENTS_FOR_FUNCTION_TEMPLATES
- template< typename OutputIterator, typename Comparator = std::less<Vertex_const_handle> >
- OutputIterator incident_upper_faces(Vertex_const_handle v, int dim, OutputIterator out, Comparator cmp = Comparator())
- {
- return incident_faces(v, dim, out, cmp, true);
- }
- template< typename OutputIterator, typename Comparator = std::less<Vertex_const_handle> >
- OutputIterator incident_faces(Vertex_const_handle, int, OutputIterator, Comparator = Comparator(), bool = false) const;
-#else
- template< typename OutputIterator, typename Comparator >
- OutputIterator incident_upper_faces(Vertex_const_handle v, int dim, OutputIterator out, Comparator cmp = Comparator())
- {
- return incident_faces(v, dim, out, cmp, true);
- }
- template< typename OutputIterator >
- OutputIterator incident_upper_faces(Vertex_const_handle v, int dim, OutputIterator out)
- {
- return incident_faces(v, dim, out, std::less<Vertex_const_handle>(), true);
- }
- template< typename OutputIterator, typename Comparator >
- OutputIterator incident_faces(Vertex_const_handle, int, OutputIterator, Comparator = Comparator(), bool = false) const;
- template< typename OutputIterator >
- OutputIterator incident_faces(Vertex_const_handle, int, OutputIterator,
- std::less<Vertex_const_handle> = std::less<Vertex_const_handle>(), bool = false) const;
-#endif
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - INPUT / OUTPUT
-
- std::istream & read_full_cells(std::istream &, const std::vector<Vertex_handle> &);
- std::ostream & write_full_cells(std::ostream &, std::map<Vertex_const_handle, int> &) const;
-
-}; // end of ``declaration/definition'' of Triangulation_data_structure<...>
-
-// = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
-
-// FUNCTIONS THAT ARE MEMBER FUNCTIONS:
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - - - - - THE GATHERING METHODS
-
-template< class Dim, class Vb, class Fcb >
-template< typename OutputIterator >
-OutputIterator
-Triangulation_data_structure<Dim, Vb, Fcb>
-::incident_full_cells(const Face & f, OutputIterator out) const /* Concept */
-{
- // CGAL_expensive_precondition_msg(is_full_cell(f.full_cell()), "the facet does not belong to the Triangulation");
- Incident_full_cell_traversal_predicate tp(*this, f);
- gather_full_cells(f.full_cell(), tp, out);
- return out;
-}
-
-template< class Dim, class Vb, class Fcb >
-template< typename OutputIterator >
-OutputIterator
-Triangulation_data_structure<Dim, Vb, Fcb>
-::incident_full_cells(Vertex_const_handle v, OutputIterator out) const /* Concept */
-{
-// CGAL_expensive_precondition(is_vertex(v));
- CGAL_precondition(Vertex_handle() != v);
- Face f(v->full_cell());
- f.set_index(0, v->full_cell()->index(v));
- return incident_full_cells(f, out);
-}
-
-template< class Dim, class Vb, class Fcb >
-template< typename OutputIterator >
-OutputIterator
-Triangulation_data_structure<Dim, Vb, Fcb>
-::star(const Face & f, OutputIterator out) const /* Concept */
-{
- // CGAL_precondition_msg(is_full_cell(f.full_cell()), "the facet does not belong to the Triangulation");
- Star_traversal_predicate tp(*this, f);
- gather_full_cells(f.full_cell(), tp, out);
- return out;
-}
-
-template< class Dim, class Vb, class Fcb >
-template< typename TraversalPredicate, typename OutputIterator >
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Facet
-Triangulation_data_structure<Dim, Vb, Fcb>
-::gather_full_cells(Full_cell_handle start,
- TraversalPredicate & tp,
- OutputIterator & out) const /* Concept */
-{
- std::queue<Full_cell_handle> queue;
- set_visited(start, true);
- queue.push(start);
- const int cur_dim = current_dimension();
- Facet ft;
- while( ! queue.empty() )
- {
- Full_cell_handle s = queue.front();
- queue.pop();
- *out = s;
- ++out;
- for( int i = 0; i <= cur_dim; ++i )
- {
- Full_cell_handle n = s->neighbor(i);
- if( ! get_visited(n) )
- {
- set_visited(n, true);
- if( tp(Facet(s, i)) )
- queue.push(n);
- else
- ft = Facet(s, i);
- }
- }
- }
- clear_visited_marks(start);
- return ft;
-}
-
-#ifdef CGAL_CFG_NO_CPP0X_DEFAULT_TEMPLATE_ARGUMENTS_FOR_FUNCTION_TEMPLATES
-template< class Dim, class Vb, class Fcb >
-template< typename OutputIterator >
-OutputIterator
-Triangulation_data_structure<Dim, Vb, Fcb>
-::incident_faces(Vertex_const_handle v, int dim, OutputIterator out,
- std::less<Vertex_const_handle> cmp, bool upper_faces) const
-{
- return incident_faces<OutputIterator, std::less<Vertex_const_handle> >(v, dim, out, cmp, upper_faces);
-}
-#endif
-
-template< class Dim, class Vb, class Fcb >
-template< typename OutputIterator, typename Comparator >
-OutputIterator
-Triangulation_data_structure<Dim, Vb, Fcb>
-::incident_faces(Vertex_const_handle v, int dim, OutputIterator out, Comparator cmp, bool upper_faces) const
-{
- CGAL_precondition( 0 < dim );
- if( dim >= current_dimension() )
- return out;
- typedef std::vector<Full_cell_handle> Simplices;
- Simplices simps;
- simps.reserve(64);
- // gather incident full_cells
- std::back_insert_iterator<Simplices> sout(simps);
- incident_full_cells(v, sout);
- // for storing the handles to the vertices of a full_cell
- typedef std::vector<Vertex_const_handle> Vertices;
- typedef std::vector<int> Indices;
- Vertices vertices(1 + current_dimension());
- Indices sorted_idx(1 + current_dimension());
- // setup Face comparator and Face_set
- typedef internal::Triangulation::Compare_faces_with_common_first_vertex<Self>
- Upper_face_comparator;
- Upper_face_comparator ufc(dim);
- typedef std::set<Face, Upper_face_comparator> Face_set;
- Face_set face_set(ufc);
- for( typename Simplices::const_iterator s = simps.begin(); s != simps.end(); ++s )
- {
- int v_idx(0); // the index of |v| in the sorted full_cell
- // get the vertices of the full_cell and sort them
- for( int i = 0; i <= current_dimension(); ++i )
- vertices[i] = (*s)->vertex(i);
- if( upper_faces )
- {
- std::sort(vertices.begin(), vertices.end(), cmp);
- while( vertices[v_idx] != v )
- ++v_idx;
- }
- else
- {
- while( vertices[v_idx] != v )
- ++v_idx;
- if( 0 != v_idx )
- std::swap(vertices[0], vertices[v_idx]);
- v_idx = 0;
- typename Vertices::iterator vbegin(vertices.begin());
- ++vbegin;
- std::sort(vbegin, vertices.end(), cmp);
- }
- if( v_idx + dim > current_dimension() )
- continue; // |v| is too far to the right
- // stores the index of the vertices of s in the same order
- // as in |vertices|:
- for( int i = 0; i <= current_dimension(); ++i )
- sorted_idx[i] = (*s)->index(vertices[i]);
- // init state for enumerating all candidate faces:
- internal::Combination_enumerator f_idx(dim, v_idx + 1, current_dimension());
- Face f(*s);
- f.set_index(0, sorted_idx[v_idx]);
- while( ! f_idx.end() )
- {
- for( int i = 0; i < dim; ++i )
- f.set_index(1 + i, sorted_idx[f_idx[i]]);
- face_set.insert(f); // checks if face has already been found
-
- // compute next sorted face (lexicographic enumeration)
- ++f_idx;
- }
- }
- typename Face_set::iterator fit = face_set.begin();
- while( fit != face_set.end() )
- *out++ = *fit++;
- return out;
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - - - - - THE REMOVAL METHODS
-
-template <class Dim, class Vb, class Fcb>
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Vertex_handle
-Triangulation_data_structure<Dim, Vb, Fcb>
-::collapse_face(const Face & f) /* Concept */
-{
- const int fd = f.face_dimension();
- CGAL_precondition( (1 <= fd ) && (fd < current_dimension()));
- std::vector<Full_cell_handle> simps;
- // save the Face's vertices:
- Full_cell s;
- for( int i = 0; i <= fd; ++i )
- s.set_vertex(i, f.vertex(i));
- // compute the star of f
- simps.reserve(64);
- std::back_insert_iterator<std::vector<Full_cell_handle> > out(simps);
- star(f, out);
- Vertex_handle v = insert_in_hole(simps.begin(), simps.end(), Facet(f.full_cell(), f.index(0)));
- for( int i = 0; i <= fd; ++i )
- delete_vertex(s.vertex(i));
- return v;
-}
-
-template <class Dim, class Vb, class Fcb>
-void
-Triangulation_data_structure<Dim, Vb, Fcb>
-::remove_decrease_dimension(Vertex_handle v, Vertex_handle star) /* Concept */
-{
- CGAL_assertion( current_dimension() >= -1 );
- if( -1 == current_dimension() )
- {
- clear();
- return;
- }
- else if( 0 == current_dimension() )
- {
- delete_full_cell(v->full_cell());
- delete_vertex(v);
- star->full_cell()->set_neighbor(0, Full_cell_handle());
- set_current_dimension(-1);
- return;
- }
- else if( 1 == current_dimension() )
- {
- Full_cell_handle s = v->full_cell();
- int star_index;
- if( s->has_vertex(star, star_index) )
- s = s->neighbor(star_index);
- // Here, |star| is not a vertex of |s|, so it's the only finite
- // full_cell
- Full_cell_handle inf1 = s->neighbor(0);
- Full_cell_handle inf2 = s->neighbor(1);
- Vertex_handle v2 = s->vertex(1 - s->index(v));
- delete_vertex(v);
- delete_full_cell(s);
- inf1->set_vertex(1, Vertex_handle());
- inf1->set_vertex(1, Vertex_handle());
- inf2->set_neighbor(1, Full_cell_handle());
- inf2->set_neighbor(1, Full_cell_handle());
- associate_vertex_with_full_cell(inf1, 0, star);
- associate_vertex_with_full_cell(inf2, 0, v2);
- set_neighbors(inf1, 0, inf2, 0);
- set_current_dimension(0);
- return;
- }
- typedef std::vector<Full_cell_handle> Simplices;
- Simplices simps;
- incident_full_cells(v, std::back_inserter(simps));
- for( typename Simplices::iterator it = simps.begin(); it != simps.end(); ++it )
- {
- int v_idx = (*it)->index(v);
- if( ! (*it)->has_vertex(star) )
- {
- delete_full_cell((*it)->neighbor(v_idx));
- for( int i = 0; i <= current_dimension(); ++i )
- (*it)->vertex(i)->set_full_cell(*it);
- }
- else
- star->set_full_cell(*it);
- if( v_idx != current_dimension() )
- {
- (*it)->swap_vertices(v_idx, current_dimension());
- (*it)->swap_vertices(current_dimension() - 2, current_dimension() - 1);
- }
- (*it)->set_vertex(current_dimension(), Vertex_handle());
- (*it)->set_neighbor(current_dimension(), Full_cell_handle());
- }
- set_current_dimension(current_dimension()-1);
- delete_vertex(v);
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - - - - - THE INSERTION METHODS
-
-template <class Dim, class Vb, class Fcb>
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Vertex_handle
-Triangulation_data_structure<Dim, Vb, Fcb>
-::insert_in_full_cell(Full_cell_handle s) /* Concept */
-{
- CGAL_precondition(0 < current_dimension());
- CGAL_precondition(Full_cell_handle() != s);
- // CGAL_expensive_precondition(is_full_cell(s));
-
- const int cur_dim = current_dimension();
- Vertex_handle v = new_vertex();
- // the full_cell 'fc' is just used to store the handle to all the new full_cells.
- Full_cell fc(maximal_dimension());
- for( int i = 1; i <= cur_dim; ++i )
- {
- Full_cell_handle new_s = new_full_cell(s);
- fc.set_neighbor(i, new_s);
- associate_vertex_with_full_cell(new_s, i, v);
- s->vertex(i-1)->set_full_cell(new_s);
- set_neighbors(new_s, i, neighbor(s, i), mirror_index(s, i));
- }
- fc.set_neighbor(0, s);
- associate_vertex_with_full_cell(s, 0, v);
- for( int i = 0; i <= cur_dim; ++i )
- for( int j = 0; j <= cur_dim; ++j )
- {
- if( j == i ) continue;
- set_neighbors(fc.neighbor(i), j, fc.neighbor(j), i);
- }
- return v;
-}
-
-template <class Dim, class Vb, class Fcb >
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Vertex_handle
-Triangulation_data_structure<Dim, Vb, Fcb>
-::insert_in_face(const Face & f) /* Concept */
-{
- std::vector<Full_cell_handle> simps;
- simps.reserve(64);
- std::back_insert_iterator<std::vector<Full_cell_handle> > out(simps);
- incident_full_cells(f, out);
- return insert_in_hole(simps.begin(), simps.end(), Facet(f.full_cell(), f.index(0)));
-}
-template <class Dim, class Vb, class Fcb >
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Vertex_handle
-Triangulation_data_structure<Dim, Vb, Fcb>
-::insert_in_facet(const Facet & ft) /* Concept */
-{
- Full_cell_handle s[2];
- s[0] = full_cell(ft);
- int i = index_of_covertex(ft);
- s[1] = s[0]->neighbor(i);
- i = ( i + 1 ) % current_dimension();
- return insert_in_hole(s, s+2, Facet(s[0], i));
-}
-
-template <class Dim, class Vb, class Fcb >
-template < typename OutputIterator >
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Full_cell_handle
-Triangulation_data_structure<Dim, Vb, Fcb>
-::insert_in_tagged_hole(Vertex_handle v, Facet f,
- OutputIterator new_full_cells)
-{
- CGAL_assertion_msg(is_boundary_facet(f), "starting facet should be on the hole boundary");
-
- const int cur_dim = current_dimension();
- Full_cell_handle new_s;
-
- std::queue<IITH_task> task_queue;
- task_queue.push(
- IITH_task(f, mirror_index(full_cell(f), index_of_covertex(f))) );
-
- while (!task_queue.empty())
- {
- IITH_task task = task_queue.front();
- task_queue.pop();
-
- Full_cell_handle old_s = full_cell(task.boundary_facet);
- const int facet_index = index_of_covertex(task.boundary_facet);
-
- Full_cell_handle outside_neighbor = neighbor(old_s, facet_index);
- // Here, "new_s" might actually be a new cell, but it might also be "old_s"
- // if it has not been treated already in the meantime
- new_s = neighbor(outside_neighbor, task.index_of_inside_cell_in_outside_cell);
- // If the cell has not been treated yet
- if (old_s == new_s)
- {
- new_s = new_full_cell();
-
- int i(0);
- for ( ; i < facet_index ; ++i)
- associate_vertex_with_full_cell(new_s, i, old_s->vertex(i));
- ++i; // skip facet_index
- for ( ; i <= cur_dim ; ++i)
- associate_vertex_with_full_cell(new_s, i, old_s->vertex(i));
- associate_vertex_with_full_cell(new_s, facet_index, v);
- set_neighbors(new_s,
- facet_index,
- outside_neighbor,
- mirror_index(old_s, facet_index));
-
- // add the new full_cell to the list of new full_cells
- *new_full_cells++ = new_s;
-
- // check all of |Facet f|'s neighbors
- for (i = 0 ; i <= cur_dim ; ++i)
- {
- if (facet_index == i)
- continue;
- // we define a |Rotor| because it makes it easy to rotate around
- // in a self contained fashion. The corresponding potential
- // boundary facet is Facet(full_cell(rot), index_of_covertex(rot))
- Rotor rot(old_s, i, facet_index);
- // |rot| on line above, stands for Candidate Facet
- while (!is_boundary_facet(rot))
- rot = rotate_rotor(rot);
-
- // we did find the |i|-th neighbor of Facet(old_s, facet_index)...
- // has it already been extruded to center point |v| ?
- Full_cell_handle inside = full_cell(rot);
- Full_cell_handle outside = neighbor(inside, index_of_covertex(rot));
- // "m" is the vertex of outside which is not on the boundary
- Vertex_handle m = inside->mirror_vertex(index_of_covertex(rot), current_dimension()); // CJTODO: use mirror_index?
- // "index" is the index of m in "outside"
- int index = outside->index(m);
- // new_neighbor is the inside cell which is registered as the neighbor
- // of the outside cell => it's either a newly created inside cell or an
- // old inside cell which we are about to delete
- Full_cell_handle new_neighbor = outside->neighbor(index);
-
- // Is new_neighbor still the old neighbor?
- if (new_neighbor == inside)
- {
- task_queue.push(IITH_task(
- Facet(inside, index_of_covertex(rot)), // boundary facet
- index, // index_of_inside_cell_in_outside_cell
- new_s, // future_neighbor
- i, // new_cell_index_in_future_neighbor
- index_of_second_covertex(rot) // index_of_future_neighbor_in_new_cell
- ));
- }
- }
- }
-
- // If there is some neighbor stories to fix
- if (task.future_neighbor != Full_cell_handle())
- {
- // now the new neighboring full_cell exists, we link both
- set_neighbors(new_s,
- task.index_of_future_neighbor_in_new_cell,
- task.future_neighbor,
- task.new_cell_index_in_future_neighbor);
- }
- }
-
- return new_s;
-}
-
-template< class Dim, class Vb, class Fcb >
-template< typename Forward_iterator, typename OutputIterator >
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Vertex_handle
-Triangulation_data_structure<Dim, Vb, Fcb>
-::insert_in_hole(Forward_iterator start, Forward_iterator end, Facet f,
- OutputIterator out) /* Concept */
-{
- CGAL_expensive_precondition(
- ( std::distance(start, end) == 1 )
- || ( current_dimension() > 1 ) );
- Forward_iterator sit = start;
- while( end != sit )
- set_visited(*sit++, true);
- Vertex_handle v = new_vertex();
- insert_in_tagged_hole(v, f, out);
- delete_full_cells(start, end);
- return v;
-}
-
-template< class Dim, class Vb, class Fcb >
-template< typename Forward_iterator >
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Vertex_handle
-Triangulation_data_structure<Dim, Vb, Fcb>
-::insert_in_hole(Forward_iterator start, Forward_iterator end, Facet f) /* Concept */
-{
- Emptyset_iterator out;
- return insert_in_hole(start, end, f, out);
-}
-
-template <class Dim, class Vb, class Fcb>
-void
-Triangulation_data_structure<Dim, Vb, Fcb>
-::clear_visited_marks(Full_cell_handle start) const // NOT DOCUMENTED
-{
- CGAL_precondition(start != Full_cell_handle());
-
- std::queue<Full_cell_handle> queue;
- set_visited(start, false);
- queue.push(start);
- const int cur_dim = current_dimension();
- while( ! queue.empty() )
- {
- Full_cell_handle s = queue.front();
- queue.pop();
- for( int i = 0; i <= cur_dim; ++i )
- {
- if( get_visited(s->neighbor(i)) )
- {
- set_visited(s->neighbor(i), false);
- queue.push(s->neighbor(i));
- }
- }
- }
-}
-
-template <class Dim, class Vb, class Fcb>
-void Triangulation_data_structure<Dim, Vb, Fcb>
-::do_insert_increase_dimension(Vertex_handle x, Vertex_handle star)
-{
- Full_cell_handle start = full_cells_begin();
- Full_cell_handle swap_me;
- const int cur_dim = current_dimension();
- for( Full_cell_iterator S = full_cells_begin(); S != full_cells_end(); ++S )
- {
- if( Vertex_handle() != S->vertex(cur_dim) )
- continue;
- set_visited(S, true);
- // extends full_cell |S| to include the new vertex as the
- // current_dimension()-th vertex
- associate_vertex_with_full_cell(S, cur_dim, x);
- if( ! S->has_vertex(star) )
- { // S is bounded, we create its unbounded "twin" full_cell
- Full_cell_handle S_new = new_full_cell();
- set_neighbors(S, cur_dim, S_new, 0);
- associate_vertex_with_full_cell(S_new, 0, star);
- // here, we could be clever so as to get consistent orientation
- for( int k = 1; k <= cur_dim; ++k )
- associate_vertex_with_full_cell(S_new, k, vertex(S, k - 1));
- }
- }
- // now we setup the neighbors
- set_visited(start, false);
- std::queue<Full_cell_handle> queue;
- queue.push(start);
- while( ! queue.empty() )
- {
- Full_cell_handle S = queue.front();
- queue.pop();
- // here, the first visit above ensured that all neighbors exist now.
- // Now we need to connect them with adjacency relation
- int star_index;
- if( S->has_vertex(star, star_index) )
- {
- set_neighbors( S, cur_dim, neighbor(neighbor(S, star_index), cur_dim),
- // this is tricky :-) :
- mirror_index(S, star_index) + 1);
- }
- else
- {
- Full_cell_handle S_new = neighbor(S, cur_dim);
- for( int k = 0 ; k < cur_dim ; ++k )
- {
- Full_cell_handle S_opp = neighbor(S, k);
- if( ! S_opp->has_vertex(star) )
- set_neighbors(S_new, k + 1, neighbor(S_opp, cur_dim), mirror_index(S, k) + 1);
- // neighbor of S_new opposite to v is S_new'
- // the vertex opposite to v remains the same but ...
- // remember the shifting of the vertices one step to the right
- }
- }
- for( int k = 0 ; k < cur_dim ; ++k )
- if( get_visited(neighbor(S, k)) )
- {
- set_visited(neighbor(S, k), false);
- queue.push(neighbor(S, k));
- }
- }
- if( ( ( cur_dim % 2 ) == 0 ) && ( cur_dim > 1 ) )
- {
- for( Full_cell_iterator S = full_cells_begin(); S != full_cells_end(); ++S )
- {
- if( x != S->vertex(cur_dim) )
- S->swap_vertices(cur_dim - 1, cur_dim);
- }
- }
- if( Full_cell_handle() != swap_me )
- swap_me->swap_vertices(1, 2);
-}
-
-template <class Dim, class Vb, class Fcb>
-typename Triangulation_data_structure<Dim, Vb, Fcb>::Vertex_handle
-Triangulation_data_structure<Dim, Vb, Fcb>
-::insert_increase_dimension(Vertex_handle star) /* Concept */
-{
- const int prev_cur_dim = current_dimension();
- CGAL_precondition(prev_cur_dim < maximal_dimension());
- if( -2 != current_dimension() )
- {
- CGAL_precondition( Vertex_handle() != star );
- CGAL_expensive_precondition(is_vertex(star));
- }
-
- set_current_dimension(prev_cur_dim + 1);
- Vertex_handle v = new_vertex();
- switch( prev_cur_dim )
- {
- case -2:
- { // insertion of the first vertex
- // ( geometrically : infinite vertex )
- Full_cell_handle s = new_full_cell();
- associate_vertex_with_full_cell(s, 0, v);
- break;
- }
- case -1:
- { // insertion of the second vertex
- // ( geometrically : first finite vertex )
- //we create a triangulation of the 0-sphere, with
- // vertices |star| and |v|
- Full_cell_handle infinite_full_cell = star->full_cell();
- Full_cell_handle finite_full_cell = new_full_cell();
- associate_vertex_with_full_cell(finite_full_cell, 0, v);
- set_neighbors(infinite_full_cell, 0, finite_full_cell, 0);
- break;
- }
- default:
- do_insert_increase_dimension(v, star);
- break;
- }
- return v;
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - - - - - VALIDITY CHECKS
-
-template <class Dimen, class Vb, class Fcb>
-bool Triangulation_data_structure<Dimen, Vb, Fcb>
-::is_valid(bool verbose, int /* level */) const /* Concept */
-{
- Full_cell_const_handle s, t;
- Vertex_const_handle v;
- int i, j, k;
-
- if( current_dimension() == -2 )
- {
- if( ! vertices_.empty() || ! full_cells_.empty() )
- {
- if( verbose ) CGAL_warning_msg(false, "current dimension is -2 but there are vertices or full_cells");
- return false;
- }
- }
-
- if( current_dimension() == -1 )
- {
- if ( (number_of_vertices() != 1) || (number_of_full_cells() != 1) )
- {
- if( verbose ) CGAL_warning_msg(false, "current dimension is -1 but there isn't one vertex and one full_cell");
- return false;
- }
- }
-
- for( v = vertices_begin(); v != vertices_end(); ++v )
- {
- if( ! v->is_valid(verbose) )
- return false;
- }
-
- // FUTURE: for each vertex v, gather incident full_cells. then, check that
- // any full_cell containing v is among those gathered full_cells...
-
- if( current_dimension() < 0 )
- return true;
-
- for( s = full_cells_begin(); s != full_cells_end(); ++s )
- {
- if( ! s->is_valid(verbose) )
- return false;
- // check that the full cell has no duplicate vertices
- for( i = 0; i <= current_dimension(); ++i )
- for( j = i + 1; j <= current_dimension(); ++j )
- if( vertex(s,i) == vertex(s,j) )
- {
- CGAL_warning_msg(false, "a full_cell has two equal vertices");
- return false;
- }
- }
-
- for( s = full_cells_begin(); s != full_cells_end(); ++s )
- {
- for( i = 0; i <= current_dimension(); ++i )
- if( (t = neighbor(s,i)) != Full_cell_const_handle() )
- {
- int l = mirror_index(s,i);
- if( s != neighbor(t,l) || i != mirror_index(t,l) )
- {
- if( verbose ) CGAL_warning_msg(false, "neighbor relation is not symmetric");
- return false;
- }
- for( j = 0; j <= current_dimension(); ++j )
- if( j != i )
- {
- // j must also occur as a vertex of t
- for( k = 0; k <= current_dimension() && ( vertex(s,j) != vertex(t,k) || k == l); ++k )
- ;
- if( k > current_dimension() )
- {
- if( verbose ) CGAL_warning_msg(false, "too few shared vertices between neighbors full_cells.");
- return false;
- }
- }
- }
- else
- {
- if( verbose ) CGAL_warning_msg(false, "full_cell has a NULL neighbor");
- return false;
- }
- }
- return true;
-}
-
-// - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-// - - - - - - - - - - - - - - - - - - - - - - - - INPUT / OUTPUT
-
-// NOT DOCUMENTED
-template <class Dim, class Vb, class Fcb>
-template <class OutStream>
-void Triangulation_data_structure<Dim, Vb, Fcb>
-::write_graph(OutStream & os)
-{
- std::vector<std::set<int> > edges;
- os << number_of_vertices() + 1; // add the vertex at infinity
- int count(1);
- for( Vertex_iterator vit = vertices_begin(); vit != vertices_end(); ++vit )
- vit->idx_ = count++;
- edges.resize(number_of_vertices()+1);
- for( Full_cell_iterator sit = full_cells_begin(); sit != full_cells_end(); ++sit )
- {
- int v1 = 0;
- while( v1 < current_dimension() )
- {
- int v2 = v1 + 1;
- while( v2 <= current_dimension() )
- {
- int i1, i2;
- if( Vertex_handle() != sit-> vertex(v1) )
- i1 = sit->vertex(v1)->idx_;
- else
- i1 = 0;
- if( Vertex_handle() != sit-> vertex(v2) )
- i2 = sit->vertex(v2)->idx_;
- else
- i2 = 0;
- edges[i1].insert(i2);
- edges[i2].insert(i1);
- ++v2;
- }
- ++v1;
- }
- }
- for( std::size_t i = 0; i < edges.size(); ++i )
- {
- os << std::endl << edges[i].size();
- for( std::set<int>::const_iterator nit = edges[i].begin();
- nit != edges[i].end(); ++nit )
- {
- os << ' ' << (*nit);
- }
- }
-}
-
-// NOT DOCUMENTED...
-template<class Dimen, class Vb, class Fcb>
-std::istream &
-Triangulation_data_structure<Dimen, Vb, Fcb>
-::read_full_cells(std::istream & is, const std::vector<Vertex_handle> & vertices)
-{
- std::size_t m; // number of full_cells
- int index;
- const int cd = current_dimension();
- if( is_ascii(is) )
- is >> m;
- else
- read(is, m, io_Read_write());
-
- std::vector<Full_cell_handle> full_cells;
- full_cells.reserve(m);
- // read the vertices of each full_cell
- std::size_t i = 0;
- while( i < m )
- {
- Full_cell_handle s = new_full_cell();
- full_cells.push_back(s);
- for( int j = 0; j <= cd; ++j )
- {
- if( is_ascii(is) )
- is >> index;
- else
- read(is, index);
- s->set_vertex(j, vertices[index]);
- }
- // read other non-combinatorial information for the full_cells
- is >> (*s);
- ++i;
- }
-
- // read the neighbors of each full_cell
- i = 0;
- if( is_ascii(is) )
- while( i < m )
- {
- for( int j = 0; j <= cd; ++j )
- {
- is >> index;
- full_cells[i]->set_neighbor(j, full_cells[index]);
- }
- ++i;
- }
- else
- while( i < m )
- {
- for( int j = 0; j <= cd; ++j )
- {
- read(is, index);
- full_cells[i]->set_neighbor(j, full_cells[index]);
- }
- ++i;
- }
-
- // compute the mirror indices
- for( i = 0; i < m; ++i )
- {
- Full_cell_handle s = full_cells[i];
- for( int j = 0; j <= cd; ++j )
- {
- if( -1 != s->mirror_index(j) )
- continue;
- Full_cell_handle n = s->neighbor(j);
- int k = 0;
- Full_cell_handle nn = n->neighbor(k);
- while( s != nn )
- nn = n->neighbor(++k);
- s->set_mirror_index(j,k);
- n->set_mirror_index(k,j);
- }
- }
- return is;
-}
-
-// NOT DOCUMENTED...
-template<class Dimen, class Vb, class Fcb>
-std::ostream &
-Triangulation_data_structure<Dimen, Vb, Fcb>
-::write_full_cells(std::ostream & os, std::map<Vertex_const_handle, int> & index_of_vertex) const
-{
- std::map<Full_cell_const_handle, int> index_of_full_cell;
-
- std::size_t m = number_of_full_cells();
-
- if( is_ascii(os) )
- os << std::endl << m;
- else
- write(os, m, io_Read_write());
-
- const int cur_dim = current_dimension();
- // write the vertex indices of each full_cell
- int i = 0;
- for( Full_cell_const_iterator it = full_cells_begin(); it != full_cells_end(); ++it )
- {
- index_of_full_cell[it] = i++;
- if( is_ascii(os) )
- os << std::endl;
- for( int j = 0; j <= cur_dim; ++j )
- {
- if( is_ascii(os) )
- os << ' ' << index_of_vertex[it->vertex(j)];
- else
- write(os, index_of_vertex[it->vertex(j)]);
- }
- // write other non-combinatorial information for the full_cells
- os << (*it);
- }
-
- CGAL_assertion( (std::size_t) i == m );
-
- // write the neighbors of each full_cell
- if( is_ascii(os) )
- for( Full_cell_const_iterator it = full_cells_begin(); it != full_cells_end(); ++it )
- {
- os << std::endl;
- for( int j = 0; j <= cur_dim; ++j )
- os << ' ' << index_of_full_cell[it->neighbor(j)];
- }
- else
- for( Full_cell_const_iterator it = full_cells_begin(); it != full_cells_end(); ++it )
- {
- for( int j = 0; j <= cur_dim; ++j )
- write(os, index_of_full_cell[it->neighbor(j)]);
- }
-
- return os;
-}
-
-// = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
-
-// FUNCTIONS THAT ARE NOT MEMBER FUNCTIONS:
-
-template<class Dimen, class Vb, class Fcb>
-std::istream &
-operator>>(std::istream & is, Triangulation_data_structure<Dimen, Vb, Fcb> & tr)
- // reads :
- // - the dimensions (maximal and current)
- // - the number of finite vertices
- // - the non combinatorial information on vertices (point, etc)
- // - the number of full_cells
- // - the full_cells by the indices of their vertices in the preceding list
- // of vertices, plus the non combinatorial information on each full_cell
- // - the neighbors of each full_cell by their index in the preceding list
-{
- typedef Triangulation_data_structure<Dimen, Vb, Fcb> TDS;
- typedef typename TDS::Vertex_handle Vertex_handle;
-
- // read current dimension and number of vertices
- std::size_t n;
- int cd;
- if( is_ascii(is) )
- is >> cd >> n;
- else
- {
- read(is, cd);
- read(is, n, io_Read_write());
- }
-
- CGAL_assertion_msg( cd <= tr.maximal_dimension(), "input Triangulation_data_structure has too high dimension");
-
- tr.clear();
- tr.set_current_dimension(cd);
-
- if( n == 0 )
- return is;
-
- std::vector<Vertex_handle> vertices;
- vertices.resize(n);
-
- // read the vertices:
- std::size_t i(0);
- while( i < n )
- {
- vertices[i] = tr.new_vertex();
- is >> (*vertices[i]); // read a vertex
- ++i;
- }
-
- // now, read the combinatorial information
- return tr.read_full_cells(is, vertices);
-}
-
-template<class Dimen, class Vb, class Fcb>
-std::ostream &
-operator<<(std::ostream & os, const Triangulation_data_structure<Dimen, Vb, Fcb> & tr)
- // writes :
- // - the dimensions (maximal and current)
- // - the number of finite vertices
- // - the non combinatorial information on vertices (point, etc)
- // - the number of full cells
- // - the full cells by the indices of their vertices in the preceding list
- // of vertices, plus the non combinatorial information on each full_cell
- // - the neighbors of each full_cell by their index in the preceding list
-{
- typedef Triangulation_data_structure<Dimen, Vb, Fcb> TDS;
- typedef typename TDS::Vertex_const_handle Vertex_handle;
- typedef typename TDS::Vertex_const_iterator Vertex_iterator;
-
- // outputs dimension and number of vertices
- std::size_t n = tr.number_of_vertices();
- if( is_ascii(os) )
- os << tr.current_dimension() << std::endl << n;
- else
- {
- write(os, tr.current_dimension());
- write(os, n, io_Read_write());
- }
-
- if( n == 0 )
- return os;
-
- // write the vertices
- std::map<Vertex_handle, int> index_of_vertex;
- int i = 0;
- for( Vertex_iterator it = tr.vertices_begin(); it != tr.vertices_end(); ++it, ++i )
- {
- os << *it; // write the vertex
- if (is_ascii(os))
- os << std::endl;
- index_of_vertex[it] = i;
- }
- CGAL_assertion( (std::size_t) i == n );
-
- // output the combinatorial information
- return tr.write_full_cells(os, index_of_vertex);
-}
-
-} //namespace CGAL
-
-#endif // CGAL_TRIANGULATION_DATA_STRUCTURE_H
diff --git a/include/gudhi_patches/CGAL/Triangulation_ds_full_cell.h b/include/gudhi_patches/CGAL/Triangulation_ds_full_cell.h
deleted file mode 100644
index 541a6a85..00000000
--- a/include/gudhi_patches/CGAL/Triangulation_ds_full_cell.h
+++ /dev/null
@@ -1,311 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TRIANGULATION_DS_FULL_CELL_H
-#define CGAL_TRIANGULATION_DS_FULL_CELL_H
-
-#include <CGAL/TDS_full_cell_default_storage_policy.h>
-#include <CGAL/TDS_full_cell_mirror_storage_policy.h>
-#include <CGAL/internal/Triangulation/Dummy_TDS.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/Default.h>
-#include <CGAL/array.h>
-
-namespace CGAL {
-
-template< class TDS = void, typename FullCellStoragePolicy = Default >
-class Triangulation_ds_full_cell
-{
- typedef typename Default::Get<FullCellStoragePolicy, TDS_full_cell_default_storage_policy>::type
- Storage_policy;
- typedef Triangulation_ds_full_cell<TDS> Self;
- typedef typename TDS::Maximal_dimension Maximal_dimension;
-
-public:
- typedef TDS Triangulation_data_structure;
- typedef typename TDS::Face Face;
- typedef typename TDS::Vertex_handle Vertex_handle; /* Concept */
- typedef typename TDS::Vertex_const_handle Vertex_const_handle;
- typedef typename TDS::Full_cell_handle Full_cell_handle; /* Concept */
- typedef typename TDS::Full_cell_const_handle Full_cell_const_handle;
- typedef typename TDS::Full_cell_data TDS_data; /* data that the TDS wants to be stored here */
- template< typename TDS2 >
- struct Rebind_TDS /* Concept */
- {
- typedef Triangulation_ds_full_cell<TDS2, FullCellStoragePolicy> Other;
- };
-
-private: // STORAGE
- typedef TFC_data< Vertex_handle, Full_cell_handle,
- Maximal_dimension, Storage_policy > Combinatorics;
- friend struct TFC_data< Vertex_handle, Full_cell_handle,
- Maximal_dimension, Storage_policy >;
- // array of vertices
- typedef typename Combinatorics::Vertex_handle_array Vertex_handle_array;
- // neighbor simplices
- typedef typename Combinatorics::Full_cell_handle_array Full_cell_handle_array;
-
- // NOT DOCUMENTED...
- typename Combinatorics::Xor_type xor_of_vertices(const int cur_dim) const
- {
- return combinatorics_.xor_of_vertices(cur_dim);
- }
-
-public:
- typedef typename Vertex_handle_array::const_iterator Vertex_handle_const_iterator;
- typedef Vertex_handle_const_iterator Vertex_handle_iterator; /* Concept */
-
- Triangulation_ds_full_cell(const int dmax) /* Concept */
- : combinatorics_(dmax), tds_data_()
- {
- CGAL_assertion( dmax > 0 );
- for( int i = 0; i <= dmax; ++i )
- {
- set_neighbor(i, Full_cell_handle());
- set_vertex(i, Vertex_handle());
- set_mirror_index(i, -1);
- }
- }
-
- Triangulation_ds_full_cell(const Triangulation_ds_full_cell & s) /* Concept */
- : combinatorics_(s.combinatorics_), tds_data_(s.tds_data_)
- {}
-
- ~Triangulation_ds_full_cell() {}
-
- int maximal_dimension() const /* Concept */
- {
- return static_cast<int>(vertices().size() - 1);
- }
-
- Vertex_handle_const_iterator vertices_begin() const /* Concept */
- {
- return vertices().begin();
- }
-
- Vertex_handle_const_iterator vertices_end() const /* Concept */
- {
- return vertices().end();
- }
-
- Vertex_handle vertex(const int i) const /* Concept */
- {
- CGAL_precondition(0<=i && i<=maximal_dimension());
- return vertices()[i];
- }
-
- Full_cell_handle neighbor(const int i) const /* Concept */
- {
- CGAL_precondition(0<=i && i<=maximal_dimension());
- return neighbors()[i];
- }
-
- int mirror_index(const int i) const /* Concept */
- {
- CGAL_precondition(0<=i && i<=maximal_dimension());
- return combinatorics_.mirror_index(i);
- }
-
- // Advanced...
- Vertex_handle mirror_vertex(const int i, const int cur_dim) const /* Concept */
- {
- CGAL_precondition(0<=i && i<=maximal_dimension());
- return combinatorics_.mirror_vertex(i, cur_dim);
- }
-
- int index(Full_cell_const_handle s) const /* Concept */
- {
- // WE ASSUME THE FULL CELL WE ARE LOOKING FOR INDEED EXISTS !
- CGAL_precondition(has_neighbor(s));
- int index(0);
- while( neighbor(index) != s )
- ++index;
- return index;
- }
-
- int index(Vertex_const_handle v) const /* Concept */
- {
- // WE ASSUME THE VERTEX WE ARE LOOKING FOR INDEED EXISTS !
- CGAL_precondition(has_vertex(v));
- int index(0);
- while( vertex(index) != v )
- ++index;
- return index;
- }
-
- void set_vertex(const int i, Vertex_handle v) /* Concept */
- {
- CGAL_precondition(0<=i && i<=maximal_dimension());
- vertices()[i] = v;
- }
-
- void set_neighbor(const int i, Full_cell_handle s) /* Concept */
- {
- CGAL_precondition(0<=i && i<=maximal_dimension());
- neighbors()[i] = s;
- }
-
- void set_mirror_index(const int i, const int index) /* Concept */
- {
- CGAL_precondition(0<=i && i<=maximal_dimension());
- combinatorics_.set_mirror_index(i, index);
- }
-
- bool has_vertex(Vertex_const_handle v) const /* Concept */
- {
- int index;
- return has_vertex(v, index);
- }
-
- bool has_vertex(Vertex_const_handle v, int & index) const /* Concept */
- {
- const int d = maximal_dimension();
- index = 0;
- while( (index <= d) && (vertex(index) != v) )
- ++index;
- return (index <= d);
- }
-
- bool has_neighbor(Full_cell_const_handle s) const /* Concept */
- {
- int index;
- return has_neighbor(s, index);
- }
-
- bool has_neighbor(Full_cell_const_handle s, int & index) const /* Concept */
- {
- const int d = maximal_dimension();
- index = 0;
- while( (index <= d) && (neighbor(index) != s) )
- ++index;
- return (index <= d);
- }
-
- void swap_vertices(const int d1, const int d2) /* Concept */
- {
- CGAL_precondition(0 <= d1 && d1<=maximal_dimension());
- CGAL_precondition(0 <= d2 && d2<=maximal_dimension());
- combinatorics_.swap_vertices(d1, d2);
- }
-
- const TDS_data & tds_data() const { return tds_data_; } /* Concept */
- TDS_data & tds_data() { return tds_data_; } /* Concept */
-
- void* for_compact_container() const { return combinatorics_.for_compact_container(); }
- void* & for_compact_container() { return combinatorics_.for_compact_container(); }
-
- bool is_valid(bool verbose = false, int = 0) const /* Concept */
- {
- const int d = maximal_dimension();
- int i(0);
- // test that the non-null Vertex_handles come first, before all null ones
- while( i <= d && vertex(i) != Vertex_handle() ) ++i;
- while( i <= d && vertex(i) == Vertex_handle() ) ++i;
- if( i <= d )
- {
- if( verbose ) CGAL_warning_msg(false, "full cell has garbage handles to vertices.");
- return false;
- }
- for( i = 0; i <= d; ++i )
- {
- if( Vertex_handle() == vertex(i) )
- break; // there are no more vertices
- Full_cell_handle n(neighbor(i));
- if( Full_cell_handle() != n )
- {
- int mirror_idx(mirror_index(i));
- if( n->neighbor(mirror_idx) == Full_cell_handle() )
- {
- if( verbose ) CGAL_warning_msg(false, "neighbor has no back-neighbor.");
- return false;
- }
- if( &(*(n->neighbor(mirror_idx))) != this )
- {
- if( verbose ) CGAL_warning_msg(false, "neighbor does not point back to correct full cell.");
- return false;
- }
- }
- }
- return true;
- }
-
-private:
- // access to data members:
- Full_cell_handle_array & neighbors() {return combinatorics_.neighbors_; }
- const Full_cell_handle_array & neighbors() const {return combinatorics_.neighbors_; }
- Vertex_handle_array & vertices() {return combinatorics_.vertices_; }
- const Vertex_handle_array & vertices() const {return combinatorics_.vertices_; }
-
- // DATA MEMBERS
- Combinatorics combinatorics_;
- mutable TDS_data tds_data_;
-};
-
-// FUNCTIONS THAT ARE NOT MEMBER FUNCTIONS:
-
-template < typename TDS, typename SSP >
-std::ostream &
-operator<<(std::ostream & O, const Triangulation_ds_full_cell<TDS,SSP> &) /* Concept */
-{
- /*if( is_ascii(O) )
- {
- // os << '\n';
- }
- else {}*/
- return O;
-}
-
-template < typename TDS, typename SSP >
-std::istream &
-operator>>(std::istream & I, Triangulation_ds_full_cell<TDS,SSP> &) /* Concept */
-{
- /*if( is_ascii(I) )
- {}
- else {}*/
- return I;
-}
-
-// Special case: specialization when template parameter is void.
-
-// we must declare it for each possible full_cell storage policy because :
-// (GCC error:) default template arguments may not be used in partial specializations
-template< typename StoragePolicy >
-class Triangulation_ds_full_cell<void, StoragePolicy>
-{
-public:
- typedef internal::Triangulation::Dummy_TDS TDS;
- typedef TDS Triangulation_data_structure;
- typedef TDS::Vertex_handle Vertex_handle;
- typedef TDS::Vertex_const_handle Vertex_const_handle;
- typedef TDS::Full_cell_handle Full_cell_handle;
- typedef TDS::Full_cell_const_handle Full_cell_const_handle;
- typedef TDS::Vertex_handle_const_iterator Vertex_handle_const_iterator;
- typedef TDS::Full_cell_data TDS_data;
- template <typename TDS2>
- struct Rebind_TDS
- {
- typedef Triangulation_ds_full_cell<TDS2, StoragePolicy> Other;
- };
- Vertex_handle_const_iterator vertices_begin();
- Vertex_handle_const_iterator vertices_end();
-};
-
-} //namespace CGAL
-
-#endif // CGAL_TRIANGULATION_DS_FULL_CELL_H
diff --git a/include/gudhi_patches/CGAL/Triangulation_ds_vertex.h b/include/gudhi_patches/CGAL/Triangulation_ds_vertex.h
deleted file mode 100644
index 381b97e1..00000000
--- a/include/gudhi_patches/CGAL/Triangulation_ds_vertex.h
+++ /dev/null
@@ -1,154 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TRIANGULATION_DS_VERTEX_H
-#define CGAL_TRIANGULATION_DS_VERTEX_H
-
-#include <CGAL/Compact_container.h>
-#include <CGAL/internal/Triangulation/Dummy_TDS.h>
-
-namespace CGAL {
-
-/* The template parameter TDS must be a model of the concept
- * 'TriangulationDataStructure' that stores vertices of type
- * 'Triangulation_ds_vertex<TDS>'
- */
-template< class TDS = void >
-class Triangulation_ds_vertex
-{
- typedef Triangulation_ds_vertex<TDS> Self;
-
-public:
- typedef TDS Triangulation_data_structure;
- typedef typename TDS::Full_cell_handle Full_cell_handle; /* Concept */
-
- template <typename TDS2>
- struct Rebind_TDS /* Concept */
- {
- typedef Triangulation_ds_vertex<TDS2> Other;
- };
-
-protected: // DATA MEMBERS
- Full_cell_handle full_cell_; // A handle to an incident full_cell
-
-public:
- // Constructs a vertex with incident full_cell 's'
- Triangulation_ds_vertex(Full_cell_handle s) : full_cell_(s) /* Concept */
- {
- CGAL_assertion( Full_cell_handle() != s );
- }
- // Constructs a vertex with no incident full_cell
- Triangulation_ds_vertex() : full_cell_() {} /* Concept */
-
- ~Triangulation_ds_vertex() {}
-
- /// Set 's' as an incident full_cell
- void set_full_cell(Full_cell_handle s) /* Concept */
- {
- full_cell_ = s;
- }
-
- /// Returns a full_cell incident to the vertex
- Full_cell_handle full_cell() const /* Concept */
- {
- return full_cell_;
- }
-
- bool is_valid(bool verbose = false, int /* level */ = 0) const /* Concept */
- {
- if( Full_cell_handle() == full_cell() )
- {
- if( verbose )
- CGAL_warning_msg(false, "vertex has no incident full cell.");
- return false;
- }
- bool found(false);
- // These two typename below are OK because TDS fullfils the
- // TriangulationDataStructure concept.
- typename TDS::Full_cell::Vertex_handle_iterator vit(full_cell()->vertices_begin());
- typedef typename TDS::Vertex_handle Vertex_handle;
- while( vit != full_cell()->vertices_end() )
- {
- if( Vertex_handle() == *vit )
- break; // The full cell has no more vertices
- if( this == &(**vit) )
- {
- found = true;
- break;
- }
- ++vit;
- }
- if( ! found )
- {
- if( verbose )
- CGAL_warning_msg(false, "vertex's adjacent full cell does not contain that vertex.");
- return false;
- }
- return true;
- }
-
-public: // FOR MEMORY MANAGEMENT
-
- void* for_compact_container() const { return full_cell_.for_compact_container(); }
- void* & for_compact_container() { return full_cell_.for_compact_container(); }
-
-}; // end of Triangulation_ds_vertex
-
-// FUNCTIONS THAT ARE NOT MEMBER FUNCTIONS:
-
-template < class TDS >
-std::istream &
-operator>>(std::istream & is, Triangulation_ds_vertex<TDS> &) /* Concept */
-{
- /*if( is_ascii(is) )
- {}
- else {}*/
- return is;
-}
-
-template< class TDS >
-std::ostream &
-operator<<(std::ostream & os, const Triangulation_ds_vertex<TDS> &) /* Concept */
-{
- /*if( is_ascii(os) )
- {
- os << '\n';
- }
- else {}*/
- return os;
-}
-
-// Special case: specialization when template parameter is void.
-
-template<>
-class Triangulation_ds_vertex<void>
-{
-public:
- typedef internal::Triangulation::Dummy_TDS Triangulation_data_structure;
- typedef Triangulation_data_structure::Full_cell_handle Full_cell_handle; /* Concept */
- template <typename TDS2>
- struct Rebind_TDS /* Concept */
- {
- typedef Triangulation_ds_vertex<TDS2> Other;
- };
-};
-
-} //namespace CGAL
-
-#endif // CGAL_TRIANGULATION_DS_VERTEX_H
diff --git a/include/gudhi_patches/CGAL/Triangulation_face.h b/include/gudhi_patches/CGAL/Triangulation_face.h
deleted file mode 100644
index bc9c1781..00000000
--- a/include/gudhi_patches/CGAL/Triangulation_face.h
+++ /dev/null
@@ -1,111 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TRIANGULATION_FACE_H
-#define CGAL_TRIANGULATION_FACE_H
-
-#include <CGAL/basic.h>
-#include <CGAL/internal/Static_or_dynamic_array.h>
-
-namespace CGAL {
-
-template< typename TDS >
-class Triangulation_face
-{
- typedef typename internal::Dimen_plus_one<typename TDS::Maximal_dimension>::type Dimen_plus;
-public:
- typedef TDS Triangulation_data_structure;
- typedef typename TDS::Full_cell_handle Full_cell_handle; /* Concept */
- typedef typename TDS::Vertex_handle Vertex_handle; /* Concept */
- typedef internal::S_or_D_array<int, Dimen_plus> Indices;
-
-protected:
- Full_cell_handle full_cell_;
- Indices indices_;
-
-public:
- explicit Triangulation_face(Full_cell_handle s) /* Concept */
- : full_cell_(s), indices_(s->maximal_dimension()+2)
- {
- CGAL_assertion( Full_cell_handle() != s );
- clear();
- }
-
- explicit Triangulation_face(const int maximal_dim) /* Concept */
- : full_cell_(), indices_(maximal_dim+2)
- {
- clear();
- }
-
- Triangulation_face(const Triangulation_face & f) /* Concept */
- : full_cell_(f.full_cell_), indices_(f.indices_)
- {}
-
- int face_dimension() const /* Concept */
- {
- int i(0);
- while( -1 != indices_[i] ) ++i;
- return (i-1);
- }
-
- Full_cell_handle full_cell() const /* Concept */
- {
- return full_cell_;
- }
-
- int index(const int i) const /* Concept */
- {
- CGAL_precondition( (0 <= i) && (i <= face_dimension()) );
- return indices_[i];
- }
-
- Vertex_handle vertex(const int i) const /* Concept */
- {
- int j = index(i);
- if( j == -1 )
- return Vertex_handle();
- return full_cell()->vertex(j);
- }
-
-// - - - - - - - - - - - - - - - - - - UPDATE FUNCTIONS
-
- void clear() /* Concept */
- {
- const std::size_t d = indices_.size();
- for(std::size_t i = 0; i < d; ++i )
- indices_[i] = -1;
- }
-
- void set_full_cell(Full_cell_handle s) /* Concept */
- {
- CGAL_precondition( Full_cell_handle() != s );
- full_cell_ = s;
- }
-
- void set_index(const int i, const int idx) /* Concept */
- {
- CGAL_precondition( (0 <= i) && ((size_t)i+1 < indices_.size()) );
- CGAL_precondition( (0 <= idx) && ((size_t)idx < indices_.size()) );
- indices_[i] = idx;
- }
-};
-
-} //namespace CGAL
-
-#endif // CGAL_TRIANGULATION_FACE_H
diff --git a/include/gudhi_patches/CGAL/Triangulation_full_cell.h b/include/gudhi_patches/CGAL/Triangulation_full_cell.h
deleted file mode 100644
index a0c5246f..00000000
--- a/include/gudhi_patches/CGAL/Triangulation_full_cell.h
+++ /dev/null
@@ -1,148 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TRIANGULATION_SIMPLEX_H
-#define CGAL_TRIANGULATION_SIMPLEX_H
-
-#include <CGAL/Triangulation_ds_full_cell.h>
-#include <CGAL/internal/Triangulation/utilities.h>
-#include <CGAL/Iterator_project.h>
-#include <CGAL/Default.h>
-
-namespace CGAL {
-
-struct No_full_cell_data {};
-
-template< class TriangulationTraits, typename Data_ = No_full_cell_data, class TDSFullCell = Default >
-class Triangulation_full_cell : public Default::Get<TDSFullCell, Triangulation_ds_full_cell<> >::type
-{
- // The default type for TDSFullCell is Triangulation_ds_full_cell<> :
- typedef typename Default::Get<TDSFullCell, Triangulation_ds_full_cell<> >::type
- Base;
- typedef Triangulation_full_cell<TriangulationTraits, Data_, TDSFullCell> Self;
-public:
- typedef Data_ Data;
- typedef typename Base::Vertex_handle Vertex_handle;
- typedef typename Base::Vertex_const_handle Vertex_const_handle;
- typedef typename Base::Vertex_handle_const_iterator Vertex_handle_const_iterator;
- typedef typename Base::Full_cell_const_handle Full_cell_const_handle;
- typedef typename TriangulationTraits::Point_d Point;
- typedef typename TriangulationTraits::Point_d Point_d;
-
-private: // DATA MEMBERS
- Data data_;
-
-public:
-
- using Base::vertices_begin;
- using Base::vertices_end;
-
- template< class TDS2 >
- struct Rebind_TDS
- {
- typedef typename Base::template Rebind_TDS<TDS2>::Other TDSFullCell2;
- typedef Triangulation_full_cell<TriangulationTraits, Data_, TDSFullCell2> Other;
- };
-
- Triangulation_full_cell(const int d)
- : Base(d), data_() {}
-
- Triangulation_full_cell(const Self & s)
- : Base(s), data_(s.data_) {}
-
- const Data & data() const
- {
- return data_;
- }
-
- Data & data()
- {
- return data_;
- }
-
- struct Point_from_vertex_handle
- {
- typedef Vertex_handle argument_type;
- typedef Point result_type;
- result_type & operator()(argument_type & x) const
- {
- return x->point();
- }
- const result_type & operator()(const argument_type & x) const
- {
- return x->point();
- }
- };
-
-protected:
-
- typedef CGAL::Iterator_project<
- Vertex_handle_const_iterator,
- internal::Triangulation::Point_from_vertex_handle<Vertex_handle, Point>
- > Point_const_iterator;
-
- Point_const_iterator points_begin() const
- { return Point_const_iterator(Base::vertices_begin()); }
- Point_const_iterator points_end() const
- { return Point_const_iterator(Base::vertices_end()); }
-};
-
-// FUNCTIONS THAT ARE NOT MEMBER FUNCTIONS:
-
-inline
-std::istream &
-operator>>(std::istream & is, No_full_cell_data &)
-{
- return is;
-}
-
-inline
-std::ostream &
-operator<<(std::ostream & os, const No_full_cell_data &)
-{
- return os;
-}
-
-template < typename TDS, typename Data, typename SSP >
-std::ostream &
-operator<<(std::ostream & O, const Triangulation_full_cell<TDS, Data, SSP> & s)
-{
- /*if( is_ascii(O) )
- {
- // os << '\n';
- }
- else {}*/
- O << s.data();
- return O;
-}
-
-template < typename TDS, typename Data, typename SSP >
-std::istream &
-operator>>(std::istream & I, Triangulation_full_cell<TDS, Data, SSP> & s)
-{
- /*if( is_ascii(I) )
- {}
- else {}*/
- I >> s.data();
- return I;
-}
-
-} //namespace CGAL
-
-#endif // CGAL_TRIANGULATION_SIMPLEX_H
diff --git a/include/gudhi_patches/CGAL/Triangulation_vertex.h b/include/gudhi_patches/CGAL/Triangulation_vertex.h
deleted file mode 100644
index f364717f..00000000
--- a/include/gudhi_patches/CGAL/Triangulation_vertex.h
+++ /dev/null
@@ -1,128 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_TRIANGULATION_VERTEX_H
-#define CGAL_TRIANGULATION_VERTEX_H
-
-#include <CGAL/Triangulation_ds_vertex.h>
-#include <CGAL/Default.h>
-
-namespace CGAL {
-
-struct No_vertex_data {};
-
-template< class TriangulationTraits, typename Data_ = No_vertex_data, class TDSVertex = Default >
-class Triangulation_vertex : public Default::Get<TDSVertex, Triangulation_ds_vertex<> >::type
-{
- // The default type for TDSVertex is Triangulation_ds_vertex<> :
- typedef typename Default::Get<TDSVertex, Triangulation_ds_vertex<> >::type
- Base;
- typedef Triangulation_vertex<TriangulationTraits, Data_, TDSVertex> Self;
-public:
- typedef Data_ Data;
- typedef typename TriangulationTraits::Point_d Point;
- typedef typename TriangulationTraits::Point_d Point_d;
- typedef typename Base::Full_cell_handle Full_cell_handle;
-
- template <typename TDS2>
- struct Rebind_TDS
- {
- typedef typename Base::template Rebind_TDS<TDS2>::Other TDSVertex2;
- typedef Triangulation_vertex<TriangulationTraits, Data_, TDSVertex2> Other;
- };
-
-private: // DATA MEMBERS
- Point point_;
- Data data_;
-
-public:
- template< typename T >
- Triangulation_vertex(Full_cell_handle s, const Point & p, const T & t)
- : Base(s), point_(p), data_(t) {}
- Triangulation_vertex(Full_cell_handle s, const Point & p)
- : Base(s), point_(p), data_() {}
- template< typename T >
- Triangulation_vertex(const Point & p, const T & t)
- : Base(), point_(p), data_(t) {}
- Triangulation_vertex(const Point & p)
- : Base(), point_(p), data_() {}
- Triangulation_vertex() : Base(), point_(), data_() {}
-
- ~Triangulation_vertex() {}
-
- /// Set the position in space of the vertex to 'p'
- void set_point(const Point & p)
- {
- point_ = p;
- }
-
- /// Returns the position in space of the vertex
- const Point & point() const
- {
- return point_;
- }
-
- const Data & data() const
- {
- return data_;
- }
-
- Data & data()
- {
- return data_;
- }
-
-}; // end of Triangulation_vertex
-
-// NON CLASS-MEMBER FUNCTIONS
-
-inline
-std::istream &
-operator>>(std::istream & is, No_vertex_data &)
-{
- return is;
-}
-
-inline
-std::ostream &
-operator<<(std::ostream & os, const No_vertex_data &)
-{
- return os;
-}
-
-template < class A, typename Data, class B >
-std::istream &
-operator>>(std::istream & is, Triangulation_vertex<A, Data, B> & v)
-{
- is >> v.point();
- return (is >> v.data());
-}
-
-template< class A, typename Data, class B >
-std::ostream &
-operator<<(std::ostream & os, const Triangulation_vertex<A, Data, B> & v)
-{
- os << v.point();
- os << v.data();
- return os;
-}
-
-} //namespace CGAL
-
-#endif // CGAL_TRIANGULATION_VERTEX_H
diff --git a/include/gudhi_patches/CGAL/argument_swaps.h b/include/gudhi_patches/CGAL/argument_swaps.h
deleted file mode 100644
index aa16f29b..00000000
--- a/include/gudhi_patches/CGAL/argument_swaps.h
+++ /dev/null
@@ -1,88 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_ARGUMENT_SWAPS_H
-#define CGAL_ARGUMENT_SWAPS_H
-
-#include <CGAL/config.h>
-#include <utility>
-
-#ifndef CGAL_CXX11
-#include <boost/preprocessor/repetition.hpp>
-#include <boost/utility/result_of.hpp>
-#endif
-
-namespace CGAL {
-
-#ifdef CGAL_CXX11
-
-namespace internal {
-
-template<int,class...> struct Apply_to_last_then_rest_;
-
-template<int d,class F,class T,class... U>
-struct Apply_to_last_then_rest_<d,F,T,U...> {
- typedef typename Apply_to_last_then_rest_<d-1,F,U...,T>::result_type result_type;
- inline result_type operator()(F&&f,T&&t,U&&...u)const{
- return Apply_to_last_then_rest_<d-1,F,U...,T>()(
- std::forward<F>(f),
- std::forward<U>(u)...,
- std::forward<T>(t));
- }
-};
-
-template<class F,class T,class... U>
-struct Apply_to_last_then_rest_<0,F,T,U...> {
- typedef decltype(std::declval<F>()(std::declval<T>(), std::declval<U>()...)) result_type;
- inline result_type operator()(F&&f,T&&t,U&&...u)const{
- return std::forward<F>(f)(std::forward<T>(t), std::forward<U>(u)...);
- }
-};
-
-} // namespace internal
-
-
-struct Apply_to_last_then_rest {
- template<class F,class T,class...U> inline
- typename internal::Apply_to_last_then_rest_<sizeof...(U),F,T,U...>::result_type
- operator()(F&&f,T&&t,U&&...u)const{
- return internal::Apply_to_last_then_rest_<sizeof...(U),F,T,U...>()(
- std::forward<F>(f),
- std::forward<T>(t),
- std::forward<U>(u)...);
- }
-};
-
-#else // CGAL_CXX11
-
-struct Apply_to_last_then_rest {
-#define CGAL_CODE(Z,N,_) template<class F,class T,BOOST_PP_ENUM_PARAMS(N,class T)> \
- typename boost::result_of<F(T,BOOST_PP_ENUM_PARAMS(N,T))>::type \
- operator()(F const&f, BOOST_PP_ENUM_BINARY_PARAMS(N,T,const&t), T const&t) const { \
- return f(t,BOOST_PP_ENUM_PARAMS(N,t)); \
- }
- BOOST_PP_REPEAT_FROM_TO(1,11,CGAL_CODE,_)
-#undef CGAL_CODE
-};
-
-#endif // CGAL_CXX11
-
-} // namespace CGAL
-
-#endif // CGAL_ARGUMENT_SWAPS_H
diff --git a/include/gudhi_patches/CGAL/determinant_of_vectors.h b/include/gudhi_patches/CGAL/determinant_of_vectors.h
deleted file mode 100644
index e1bad64e..00000000
--- a/include/gudhi_patches/CGAL/determinant_of_vectors.h
+++ /dev/null
@@ -1,117 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_DETVEC_H
-#define CGAL_DETVEC_H
-#include <CGAL/determinant.h>
-#include <CGAL/predicates/sign_of_determinant.h>
-
-namespace CGAL {
- // TODO: determine whether it is better to pass them by lines or columns.
-
- template <class NT, class Vector> inline
- NT determinant_of_vectors(Vector const&a, Vector const&b){
- return determinant<NT>(a[0],a[1],b[0],b[1]);
- }
- template <class NT, class Vector> inline
- typename Sgn<NT>::result_type
- sign_of_determinant_of_vectors(Vector const&a, Vector const&b){
- return sign_of_determinant<NT>(a[0],a[1],b[0],b[1]);
- }
-
- template <class NT, class Vector>
- NT determinant_of_vectors(Vector const&a, Vector const&b,
- Vector const&c){
- return determinant<NT>(a[0],a[1],a[2],b[0],b[1],b[2],c[0],c[1],c[2]);
- }
- template <class NT, class Vector>
- typename Sgn<NT>::result_type
- sign_of_determinant_of_vectors(Vector const&a, Vector const&b,
- Vector const&c){
- return sign_of_determinant<NT>(a[0],a[1],a[2],b[0],b[1],b[2],c[0],c[1],c[2]);
- }
-
- template <class NT, class Vector>
- NT determinant_of_vectors(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d){
- return determinant<NT>(
- a[0],a[1],a[2],a[3],
- b[0],b[1],b[2],b[3],
- c[0],c[1],c[2],c[3],
- d[0],d[1],d[2],d[3]);
- }
- template <class NT, class Vector>
- typename Sgn<NT>::result_type
- sign_of_determinant_of_vectors(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d){
- return sign_of_determinant<NT>(
- a[0],a[1],a[2],a[3],
- b[0],b[1],b[2],b[3],
- c[0],c[1],c[2],c[3],
- d[0],d[1],d[2],d[3]);
- }
-
- template <class NT, class Vector>
- NT determinant_of_vectors(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e){
- return determinant<NT>(
- a[0],a[1],a[2],a[3],a[4],
- b[0],b[1],b[2],b[3],b[4],
- c[0],c[1],c[2],c[3],c[4],
- d[0],d[1],d[2],d[3],d[4],
- e[0],e[1],e[2],e[3],e[4]);
- }
- template <class NT, class Vector>
- typename Sgn<NT>::result_type
- sign_of_determinant_of_vectors(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e){
- return sign_of_determinant<NT>(
- a[0],a[1],a[2],a[3],a[4],
- b[0],b[1],b[2],b[3],b[4],
- c[0],c[1],c[2],c[3],c[4],
- d[0],d[1],d[2],d[3],d[4],
- e[0],e[1],e[2],e[3],e[4]);
- }
-
- template <class NT, class Vector>
- NT determinant_of_vectors(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e, Vector const&f){
- return determinant<NT>(
- a[0],a[1],a[2],a[3],a[4],a[5],
- b[0],b[1],b[2],b[3],b[4],b[5],
- c[0],c[1],c[2],c[3],c[4],c[5],
- d[0],d[1],d[2],d[3],d[4],d[5],
- e[0],e[1],e[2],e[3],e[4],e[5],
- f[0],f[1],f[2],f[3],f[4],f[5]);
- }
- template <class NT, class Vector>
- typename Sgn<NT>::result_type
- sign_of_determinant_of_vectors(Vector const&a, Vector const&b,
- Vector const&c, Vector const&d, Vector const&e, Vector const&f){
- return sign_of_determinant<NT>(
- a[0],a[1],a[2],a[3],a[4],a[5],
- b[0],b[1],b[2],b[3],b[4],b[5],
- c[0],c[1],c[2],c[3],c[4],c[5],
- d[0],d[1],d[2],d[3],d[4],d[5],
- e[0],e[1],e[2],e[3],e[4],e[5],
- f[0],f[1],f[2],f[3],f[4],f[5]);
- }
-
-}
-#endif
diff --git a/include/gudhi_patches/CGAL/internal/Combination_enumerator.h b/include/gudhi_patches/CGAL/internal/Combination_enumerator.h
deleted file mode 100644
index f411e827..00000000
--- a/include/gudhi_patches/CGAL/internal/Combination_enumerator.h
+++ /dev/null
@@ -1,148 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_INTERNAL_COMBINATION_ENUMERATOR_H
-#define CGAL_INTERNAL_COMBINATION_ENUMERATOR_H
-
-#include <CGAL/basic.h>
-#include <vector>
-
-namespace CGAL {
-
-namespace internal {
-
-class Combination_enumerator
-{
- // types and member data
- typedef std::vector<int> Combination;
- Combination combi_;
- const int k_;
- const int min_;
- const int max_;
- const int max_at_pos_0_;
-
-public:
-
- // For generating all the combinations of |k| distinct elements in the
- // interval [min, max] (both included)
- Combination_enumerator(const int k, const int min, const int max)
- : combi_(k), k_(k), min_(min), max_(max), max_at_pos_0_(max + 1 - k)
- {
- CGAL_assertion_msg( min <= max, "min is larger than max");
- CGAL_assertion_msg( 1 <= k && k <= ( max - min + 1 ), "wrong value of k");
- init();
- }
-
- Combination_enumerator(const Combination_enumerator & c)
- : combi_(c.combi_), k_(c.k_), min_(c.min_), max_(c.max_), max_at_pos_0_(c.max_at_pos_0_)
- {}
-
- int number_of_elements()
- {
- return k_;
- }
-
- void init()
- {
- combi_.resize(k_);
- for( int i = 0; i < k_; ++i )
- element(i) = min_ + i;
- }
-
- bool end() const
- {
- return ( element(0) > max_at_pos_0_ );
- }
-
- int element(const int i) const
- {
- CGAL_assertion( 0 <= i && i < k_ );
- return combi_[i];
- }
-
- int & element(const int i)
- {
- CGAL_assertion( 0 <= i && i < k_ );
- return combi_[i];
- }
-
- int operator[](const int i) const
- {
- return element(i);
- }
-
- int & operator[](const int i)
- {
- return element(i);
- }
-
- void operator++()
- {
- int i = k_ - 1;
- int max_at_pos_i(max_);
- while( ( i >= 0 ) && ( element(i) >= max_at_pos_i ) )
- {
- --i;
- --max_at_pos_i;
- }
- if( -1 == i )
- {
- if( element(0) == max_at_pos_0_ )
- ++element(0); // mark then end of the enumeration with an impossible value
- // Note than when we have arrived at the end of the enumeration, applying
- // operator++() again does not change anything, so it is safe to
- // apply it too many times.
- }
- else
- {
- ++element(i);
- for( int j = i + 1; j < k_; ++j )
- element(j) = element(i) + j - i;
- }
- }
-
- Combination_enumerator operator++(int)
- {
- Combination_enumerator tmp(*this);
- ++(*this);
- return tmp;
- }
-
- // - - - - - - - - - - - - - - - - - - - - - - - - - - - TESTING
-#if 0
- void test()
- {
- std::cerr << '\n';
- while( ! end() )
- {
- std::cerr << '\n';
- for( int i = 0; i < k_; ++i )
- std::cerr << element(i) << ' ';
- ++(*this);
- }
- init();
- }
-#endif
-};
-
-} // end of namespace internal
-
-} // end of namespace CGAL
-
-#endif // CGAL_INTERNAL_COMBINATION_ENUMERATOR_H
diff --git a/include/gudhi_patches/CGAL/internal/Static_or_dynamic_array.h b/include/gudhi_patches/CGAL/internal/Static_or_dynamic_array.h
deleted file mode 100644
index ee6195d9..00000000
--- a/include/gudhi_patches/CGAL/internal/Static_or_dynamic_array.h
+++ /dev/null
@@ -1,116 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_INTERNAL_STATIC_OR_DYNAMIC_ARRAY_H
-#define CGAL_INTERNAL_STATIC_OR_DYNAMIC_ARRAY_H
-
-#include <CGAL/Compact_container.h>
-#include <CGAL/Dimension.h>
-#include <CGAL/array.h>
-#include <vector>
-
-namespace CGAL {
-
-namespace internal {
-
-// Utility for adding one to an Dimension_tag:
-
-template<typename D>
-struct Dimen_plus_one;
-
-template<>
-struct Dimen_plus_one<Dynamic_dimension_tag>
-{
- typedef Dynamic_dimension_tag type;
-};
-
-template<int D>
-struct Dimen_plus_one<Dimension_tag<D> >
-{
- typedef Dimension_tag<D+1> type;
-};
-
-// A SMALL CONTAINER UTILITY FOR DYNAMIC/STATIC MEMORY MANAGEMENT
-
-// stores an array of static or dynamic size, depending on template parameter <B>.
-
-template< typename Containee, typename D, bool WithCompactContainerHelper = false>
- struct S_or_D_array; // S = static, D = dynamic
-
-// The case of static size:
-template< typename Containee, int D, bool WithCompactContainerHelper >
-struct S_or_D_array< Containee, Dimension_tag< D >, WithCompactContainerHelper >
-: public array<Containee, D>
-{
- typedef array<Containee, D> Base;
- S_or_D_array(const int)
- : Base()
- {}
- S_or_D_array(const int, const Containee & c)
- : Base()
- {
- assign(c);
- }
- void* for_compact_container() const
- {
- return (*this)[0].for_compact_container();
- }
- void* & for_compact_container()
- {
- return (*this)[0].for_compact_container();
- }
-};
-
-// The case of dynamic size
-template< typename Containee >
-struct S_or_D_array< Containee, Dynamic_dimension_tag, false >
-: public std::vector<Containee>
-{
- typedef std::vector<Containee> Base;
- // TODO: maybe we should use some "small-vector-optimized" class.
- S_or_D_array(const int d)
- : Base(d)
- {}
- S_or_D_array(const int d, const Containee & c)
- : Base(d, c)
- {}
-};
-
-// The case of dynamic size with for_compact_container
-template< typename Containee >
-struct S_or_D_array< Containee, Dynamic_dimension_tag, true >
-: public std::vector<Containee>
-{
- typedef std::vector<Containee> Base;
- S_or_D_array(const int d)
- : Base(d), fcc_(NULL)
- {}
- S_or_D_array(const int d, const Containee & c)
- : Base(d, c), fcc_(NULL)
- {}
- void* fcc_;
- void* for_compact_container() const { return fcc_; }
- void* & for_compact_container() { return fcc_; }
-};
-
-} // end of namespace internal
-
-} // end of namespace CGAL
-
-#endif // CGAL_INTERNAL_STATIC_OR_DYNAMIC_ARRAY_H
diff --git a/include/gudhi_patches/CGAL/internal/Triangulation/Dummy_TDS.h b/include/gudhi_patches/CGAL/internal/Triangulation/Dummy_TDS.h
deleted file mode 100644
index b3a0ec98..00000000
--- a/include/gudhi_patches/CGAL/internal/Triangulation/Dummy_TDS.h
+++ /dev/null
@@ -1,49 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_INTERNAL_TRIANGULATION_DUMMY_TDS_H
-#define CGAL_INTERNAL_TRIANGULATION_DUMMY_TDS_H
-
-namespace CGAL {
-
-namespace internal {
-namespace Triangulation {
-
-struct Dummy_TDS
-{
- struct Vertex {};
- struct Vertex_handle {};
- struct Vertex_iterator {};
- struct Vertex_const_handle {};
- struct Vertex_const_iterator {};
- struct Full_cell {};
- struct Full_cell_handle {};
- struct Full_cell_iterator {};
- struct Full_cell_const_handle {};
- struct Full_cell_const_iterator {};
- struct Vertex_handle_const_iterator {};
- struct Full_cell_data {};
-};
-
-} // namespace Triangulation
-} // namespace internal
-
-} //namespace CGAL
-
-#endif // CGAL_INTERNAL_TRIANGULATION_DUMMY_TDS_H
diff --git a/include/gudhi_patches/CGAL/internal/Triangulation/Triangulation_ds_iterators.h b/include/gudhi_patches/CGAL/internal/Triangulation/Triangulation_ds_iterators.h
deleted file mode 100644
index 7e360026..00000000
--- a/include/gudhi_patches/CGAL/internal/Triangulation/Triangulation_ds_iterators.h
+++ /dev/null
@@ -1,154 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus (Well... `copy, paste and hack' of Monique Teillaud's work)
-
-#ifndef CGAL_INTERNAL_TRIANGULATION_TRIANGULATION_DS_ITERATORS_H
-#define CGAL_INTERNAL_TRIANGULATION_TRIANGULATION_DS_ITERATORS_H
-
-namespace CGAL {
-
-namespace internal {
-namespace Triangulation {
-
-template< typename TDS >
-class Triangulation_ds_facet_iterator
-{
- typedef typename TDS::Full_cell_handle Full_cell_handle;
- typedef typename TDS::Facet Facet;
-
- typedef Facet value_type;
- typedef const Facet * pointer;
- typedef const Facet & reference;
- typedef std::size_t size_type;
- typedef std::ptrdiff_t difference_type;
- typedef std::bidirectional_iterator_tag iterator_category;
-
- typedef Triangulation_ds_facet_iterator<TDS> Facet_iterator;
-
- TDS & tds_;
- Facet ft_;
- const int cur_dim_;
-
-public:
- Triangulation_ds_facet_iterator(TDS & tds)
- : tds_(tds), ft_(tds.full_cells_begin(), 0), cur_dim_(tds.current_dimension())
- {
- CGAL_assertion( cur_dim_ > 0 );
- while( ! canonical() )
- raw_increment();
- }
-
- Triangulation_ds_facet_iterator(TDS & tds, int)
- : tds_(tds), ft_(tds.full_cells_end(), 0), cur_dim_(tds.current_dimension())
- {
- CGAL_assertion( cur_dim_ > 0 );
- CGAL_assertion( canonical() );
- }
-
- Facet_iterator & operator++()
- {
- increment();
- return (*this);
- }
-
- Facet_iterator operator++(int)
- {
- Facet_iterator tmp(*this);
- increment();
- return tmp;
- }
-
- Facet_iterator & operator--()
- {
- decrement();
- return (*this);
- }
-
- Facet_iterator operator--(int)
- {
- Facet_iterator tmp(*this);
- decrement();
- return tmp;
- }
-
- bool operator==(const Facet_iterator & fi) const
- {
- return (&tds_ == &fi.tds_) &&
- (tds_.index_of_covertex(ft_) == fi.tds_.index_of_covertex(fi.ft_)) &&
- (tds_.full_cell(ft_) == fi.tds_.full_cell(fi.ft_));
- }
-
- bool operator!=(const Facet_iterator & fi) const
- {
- return !(*this == fi);
- }
-
- reference operator*() const
- {
- return ft_;
- }
-
- pointer operator->() const
- {
- return &ft_;
- }
-
-private:
- bool canonical()
- {
- if( tds_.full_cells_end() == tds_.full_cell(ft_) )
- return ( 0 == tds_.index_of_covertex(ft_) );
- return ( tds_.full_cell(ft_) <
- tds_.full_cell(ft_)->neighbor(tds_.index_of_covertex(ft_)) );
- }
-
- void raw_decrement()
- {
- int i = tds_.index_of_covertex(ft_);
- if( i == 0 )
- ft_ = Facet(--tds_.full_cell(ft_), cur_dim_);
- else
- ft_ = Facet(tds_.full_cell(ft_), i - 1);
- }
-
- void raw_increment()
- {
- int i = tds_.index_of_covertex(ft_);
- if( i == cur_dim_ )
- ft_ = Facet(++tds_.full_cell(ft_), 0);
- else
- ft_ = Facet(tds_.full_cell(ft_), i + 1);
- }
-
- void decrement()
- {
- do { raw_decrement(); } while( ! canonical() );
- }
-
- void increment()
- {
- do { raw_increment(); } while( ! canonical() );
- }
-};
-
-} // namespace Triangulation
-} // namespace internal
-
-} //namespace CGAL
-
-#endif // CGAL_INTERNAL_TRIANGULATION_TRIANGULATION_DS_ITERATORS_H
diff --git a/include/gudhi_patches/CGAL/internal/Triangulation/utilities.h b/include/gudhi_patches/CGAL/internal/Triangulation/utilities.h
deleted file mode 100644
index a1ffc775..00000000
--- a/include/gudhi_patches/CGAL/internal/Triangulation/utilities.h
+++ /dev/null
@@ -1,154 +0,0 @@
-// Copyright (c) 2009-2014 INRIA Sophia-Antipolis (France).
-// All rights reserved.
-//
-// This file is part of CGAL (www.cgal.org).
-// You can redistribute it and/or modify it under the terms of the GNU
-// General Public License as published by the Free Software Foundation,
-// either version 3 of the License, or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Samuel Hornus
-
-#ifndef CGAL_INTERNAL_TRIANGULATION_UTILITIES_H
-#define CGAL_INTERNAL_TRIANGULATION_UTILITIES_H
-
-#include <CGAL/basic.h>
-
-namespace CGAL {
-
-namespace internal {
-namespace Triangulation {
-
-template< class TDS >
-struct Dark_full_cell_data
-{
- typedef typename TDS::Full_cell_handle Full_cell_handle;
- Full_cell_handle light_copy_;
- int count_;
- Dark_full_cell_data() : light_copy_(), count_(0) {}
-};
-
-template< class TDS >
-struct Compare_faces_with_common_first_vertex
-{
- typedef typename TDS::Face Face;
-
- const int d_;
-
-public:
-
- Compare_faces_with_common_first_vertex(const int d)
- : d_(d)
- {
- CGAL_assertion( 0 < d );
- }
-
- explicit Compare_faces_with_common_first_vertex();
-
- bool operator()(const Face & left, const Face & right) const
- {
- CGAL_assertion( d_ == left.face_dimension() );
- CGAL_assertion( d_ == right.face_dimension() );
- for( int i = 1; i <= d_; ++i )
- {
- if( left.vertex(i) < right.vertex(i) )
- return true;
- if( right.vertex(i) < left.vertex(i) )
- return false;
- }
- return false;
- }
-};
-
-template< class T >
-struct Compare_vertices_for_upper_face
-{
- typedef typename T::Vertex_const_handle VCH;
-
- const T & t_;
-
-public:
-
- Compare_vertices_for_upper_face(const T & t)
- : t_(t)
- {}
-
- explicit Compare_vertices_for_upper_face();
-
- bool operator()(const VCH & left, const VCH & right) const
- {
- if( left == right )
- return false;
- if( t_.is_infinite(left) )
- return true;
- if( t_.is_infinite(right) )
- return false;
- return left < right;
- }
-};
-
-template< class T >
-struct Compare_points_for_perturbation
-{
- typedef typename T::Geom_traits::Point_d Point;
-
- const T & t_;
-
-public:
-
- Compare_points_for_perturbation(const T & t)
- : t_(t)
- {}
-
- explicit Compare_points_for_perturbation();
-
- bool operator()(const Point * left, const Point * right) const
- {
- return (SMALLER == t_.geom_traits().compare_lexicographically_d_object()(*left, *right));
- }
-};
-
-template< class T >
-struct Point_from_pointer
-{
- typedef const typename T::Geom_traits::Point_d * argument_type;
- typedef const typename T::Geom_traits::Point_d result_type;
- result_type & operator()(argument_type & x) const
- {
- return (*x);
- }
- const result_type & operator()(const argument_type & x) const
- {
- return (*x);
- }
-};
-
-template< typename Vertex_handle, typename Point >
-struct Point_from_vertex_handle
-{
- typedef Vertex_handle argument_type;
- typedef Point result_type;
- result_type & operator()(argument_type & x) const
- {
- return x->point();
- }
- const result_type & operator()(const argument_type & x) const
- {
- return x->point();
- }
-};
-
-} // namespace Triangulation
-} // namespace internal
-
-} //namespace CGAL
-
-#endif // CGAL_INTERNAL_TRIANGULATION_UTILITIES_H
diff --git a/include/gudhi_patches/CGAL/iterator_from_indices.h b/include/gudhi_patches/CGAL/iterator_from_indices.h
deleted file mode 100644
index 110bb4be..00000000
--- a/include/gudhi_patches/CGAL/iterator_from_indices.h
+++ /dev/null
@@ -1,75 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_ITERATOR_FROM_INDICES_H
-#define CGAL_ITERATOR_FROM_INDICES_H
-#include <CGAL/config.h>
-#include <boost/iterator/iterator_facade.hpp>
-namespace CGAL {
-template <class Ref_>
-struct Default_coordinate_access {
- typedef Ref_ result_type;
- template<class T> Ref_ operator()(T const& t, std::ptrdiff_t i)const{
- return t[i];
- }
-};
-
-//TODO: default type for Value_: typename same_cv<Container_,typename remove_cv<Container_>::type::value_type>::type
-template <class Container_, class Value_, class Ref_=
-#ifdef CGAL_CXX11
- decltype(std::declval<Container_>()[0])
-#else
- Value_&
-#endif
- , class Coord_access = Default_coordinate_access<Ref_>
- >
-class Iterator_from_indices
-: public boost::iterator_facade<Iterator_from_indices<Container_,Value_,Ref_,Coord_access>,
- Value_, std::bidirectional_iterator_tag, Ref_>
-{
- friend class boost::iterator_core_access;
- //FIXME: use int to save space
- //TODO: use a tuple to save space when Coord_access is empty
- typedef std::ptrdiff_t index_t;
- Container_* cont;
- index_t index;
- Coord_access ca;
- void increment(){ ++index; }
- void decrement(){ --index; }
- void advance(std::ptrdiff_t n){ index+=n; }
- ptrdiff_t distance_to(Iterator_from_indices const& other)const{
- return other.index-index;
- }
- bool equal(Iterator_from_indices const& other)const{
- return index==other.index;
- }
- Ref_ dereference()const{
- //FIXME: use the functor properly
- //Uh, and what did I mean by that?
- return ca(*cont,index);
- }
- public:
- Iterator_from_indices(Container_& cont_,std::size_t n)
- : cont(&cont_), index(n) {}
- template<class T>
- Iterator_from_indices(Container_& cont_,std::size_t n,T const&t)
- : cont(&cont_), index(n), ca(t) {}
-};
-}
-#endif // CGAL_ITERATOR_FROM_INDICES_H
diff --git a/include/gudhi_patches/CGAL/transforming_iterator.h b/include/gudhi_patches/CGAL/transforming_iterator.h
deleted file mode 100644
index 15ea19a5..00000000
--- a/include/gudhi_patches/CGAL/transforming_iterator.h
+++ /dev/null
@@ -1,123 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_TRANSFORMING_ITERATOR_H
-#define CGAL_TRANSFORMING_ITERATOR_H
-#include <boost/iterator/iterator_adaptor.hpp>
-#include <boost/utility/result_of.hpp>
-#include <boost/type_traits/is_empty.hpp>
-#include <boost/type_traits/is_reference.hpp>
-#include <boost/type_traits/is_integral.hpp>
-#include <boost/mpl/if.hpp>
-#include <boost/mpl/or.hpp>
-#include <CGAL/Default.h>
-#include <utility>
-
-// Inspired by the boost version, but more compact and
-// without any iterator_category games.
-
-namespace CGAL {
-namespace internal {
-
-// non-empty case
-template<class T,bool=boost::is_empty<T>::value> struct Functor_as_base {
- Functor_as_base(){}
- Functor_as_base(T const& t):f(t){}
- //template<class T2> Functor_as_base(Functor_as_base<T2> const&g):f(g.functor()){}
- T const& functor()const{return f;}
- T & functor() {return f;}
- private:
- T f;
-};
-
-// empty case
-template<class T> struct Functor_as_base<T,true> : public T {
- Functor_as_base(){}
- Functor_as_base(T const& t):T(t){}
- //template<class T2> Functor_as_base(Functor_as_base<T2> const&g):T(g.functor()){}
- T const& functor()const{return *this;}
- T & functor() {return *this;}
-};
-
-template <typename Derived, typename F, typename Iter, typename Ref, typename Val>
-class transforming_iterator_helper
-{
- typedef std::iterator_traits<Iter> Iter_traits;
- typedef typename Iter_traits::reference Iter_ref;
- typedef typename Default::Get<Ref,
-#ifdef CGAL_CXX11
- decltype(std::declval<F>()(std::declval<Iter_ref>()))
-#else
- typename boost::result_of<F(typename Iter_traits::value_type)>::type
- // should be reference instead of value_type
-#endif
- >::type reference_;
-
- typedef typename Default::Get<Val,typename boost::remove_cv<typename boost::remove_reference<reference_>::type>::type>::type value_type;
-
- // Crappy heuristic. If we have *it that returns a Weighted_point and F that returns a reference to the Point contained in the Weighted_point it takes as argument, we do NOT want the transformed iterator to return a reference to the temporary *it. On the other hand, if *it returns an int n, and F returns a reference to array[n] it is not so good to lose the reference. This probably should be done elsewhere and should at least be made optional...
- typedef typename boost::mpl::if_<
- boost::mpl::or_<boost::is_reference<Iter_ref>,
- boost::is_integral<Iter_ref> >,
- reference_, value_type>::type reference;
-
- public:
- typedef boost::iterator_adaptor<
- Derived,
- Iter,
- value_type,
- typename Iter_traits::iterator_category,
- reference
- > type;
-};
-}
-
-template <typename F, typename Iter, typename Ref=Default, typename Val=Default>
-class transforming_iterator
-: public internal::transforming_iterator_helper<transforming_iterator<F,Iter,Ref,Val>,F,Iter,Ref,Val>::type,
-private internal::Functor_as_base<F>
-{
- friend class boost::iterator_core_access;
- typedef typename internal::transforming_iterator_helper<transforming_iterator,F,Iter,Ref,Val>::type Base;
- typedef internal::Functor_as_base<F> Functor_base;
- typename Base::reference dereference()const{
- return functor()(*this->base_reference());
- }
- public:
- using Functor_base::functor;
- transforming_iterator(){}
- explicit transforming_iterator(Iter i,F const& f=F())
- :Base(i),Functor_base(f){}
- template<class F2,class I2,class R2,class V2>
- transforming_iterator(
- transforming_iterator<F2,I2,R2,V2> const&i,
- typename boost::enable_if_convertible<I2, Iter>::type* = 0,
- typename boost::enable_if_convertible<F2, F>::type* = 0)
- : Base(i.base()),Functor_base(i.functor()) {}
-
-};
-
-template <typename F, typename Iter> inline
-transforming_iterator<F,Iter> make_transforming_iterator(Iter i, F const&f=F()) {
- return transforming_iterator<F,Iter>(i,f);
-}
-
-}
-
-#endif // CGAL_TRANSFORMING_ITERATOR_H
diff --git a/include/gudhi_patches/CGAL/transforming_pair_iterator.h b/include/gudhi_patches/CGAL/transforming_pair_iterator.h
deleted file mode 100644
index 48dac132..00000000
--- a/include/gudhi_patches/CGAL/transforming_pair_iterator.h
+++ /dev/null
@@ -1,127 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_TRANSFORMING_PAIR_ITERATOR_H
-#define CGAL_TRANSFORMING_PAIR_ITERATOR_H
-// Should be a combination of transform_iterator and zip_iterator,
-// but boost's iterator_category games are a pain.
-
-#include <CGAL/transforming_iterator.h>
-#include <CGAL/assertions.h>
-#include <boost/type_traits/is_convertible.hpp>
-
-
-
-
-namespace CGAL {
-namespace internal {
-template <class Cat1, class Cat2, bool=boost::is_convertible<Cat1,Cat2>::value>
-struct Min_category {
- CGAL_static_assertion((boost::is_convertible<Cat2,Cat1>::value));
- typedef Cat1 type;
-};
-
-template <class Cat1, class Cat2>
-struct Min_category<Cat1,Cat2,true> {
- typedef Cat2 type;
-};
-
-
-template <typename Derived, typename F, typename It1, typename It2, typename Ref, typename Val>
-class transforming_pair_iterator_helper
-{
- typedef typename Min_category<
- typename std::iterator_traits<It1>::iterator_category,
- typename std::iterator_traits<It1>::iterator_category>
- ::type iterator_category;
-
- typedef typename Default::Get<Ref,
-#ifdef CGAL_CXX11
- decltype(std::declval<F>()(std::declval<typename std::iterator_traits<It1>::reference>(),std::declval<typename std::iterator_traits<It2>::reference>()))
-#else
- typename boost::result_of<F(typename std::iterator_traits<It1>::value_type,typename std::iterator_traits<It2>::value_type)>::type
- // should be reference instead of value_type
-#endif
- >::type reference;
-
- typedef typename Default::Get<Val,typename boost::remove_cv<typename boost::remove_reference<reference>::type>::type>::type value_type;
-
- public:
- typedef boost::iterator_facade<
- Derived,
- value_type,
- iterator_category,
- reference
- // expect ptrdiff_t is good enough for difference
- > type;
-};
-}
-
-template <typename F, typename It1, typename It2, typename Ref=Default, typename Val=Default>
-class transforming_pair_iterator
-: public internal::transforming_pair_iterator_helper<transforming_pair_iterator<F,It1,It2,Ref,Val>,F,It1,It2,Ref,Val>::type,
-private internal::Functor_as_base<F>
-{
- It1 iter1; It2 iter2;
- friend class boost::iterator_core_access;
- typedef typename internal::transforming_pair_iterator_helper<transforming_pair_iterator,F,It1,It2,Ref,Val>::type Base;
- typedef internal::Functor_as_base<F> Functor_base;
- typename Base::reference dereference()const{
- return functor()(*iter1,*iter2);
- }
- bool equal(transforming_pair_iterator const&i)const{
- bool b=(iter1==i.iter1);
- CGAL_assertion(b==(iter2==i.iter2));
- //FIXME: or do we want only one driving iterator
- return b;
- }
- void increment(){ ++iter1; ++iter2; }
- void decrement(){ --iter1; --iter2; }
- void advance(std::ptrdiff_t n){
- std::advance(iter1,n);
- std::advance(iter2,n);
- }
- std::ptrdiff_t distance_to(transforming_pair_iterator const&i)const{
- std::ptrdiff_t dist=std::distance(iter1,i.iter1);
- CGAL_assertion(dist==std::distance(iter2,i.iter2));
- return dist;
- }
- public:
- using Functor_base::functor;
- transforming_pair_iterator(){}
- explicit transforming_pair_iterator(It1 i1,It2 i2,F const& f=F())
- :Functor_base(f),iter1(i1),iter2(i2){}
- template<class F2,class J1,class J2,class R2,class V2>
- transforming_pair_iterator(
- transforming_pair_iterator<F2,J1,J2,R2,V2> const&i,
- typename boost::enable_if_convertible<J1, It1>::type* = 0,
- typename boost::enable_if_convertible<J2, It2>::type* = 0,
- typename boost::enable_if_convertible<F2, F>::type* = 0)
- : Functor_base(i.functor()),iter1(i.iter1),iter2(i.iter2) {}
-
-};
-
-template <typename F, typename It1, typename It2> inline
-transforming_pair_iterator<F,It1,It2> make_transforming_pair_iterator(It1 i1, It2 i2, F const&f=F()) {
- return transforming_pair_iterator<F,It1,It2>(i1,i2,f);
-}
-
-}
-
-#endif // CGAL_TRANSFORMING_PAIR_ITERATOR_H
diff --git a/include/gudhi_patches/CGAL/typeset.h b/include/gudhi_patches/CGAL/typeset.h
deleted file mode 100644
index d4e24281..00000000
--- a/include/gudhi_patches/CGAL/typeset.h
+++ /dev/null
@@ -1,117 +0,0 @@
-// Copyright (c) 2014
-// INRIA Saclay-Ile de France (France)
-//
-// This file is part of CGAL (www.cgal.org); you can redistribute it and/or
-// modify it under the terms of the GNU Lesser General Public License as
-// published by the Free Software Foundation; either version 3 of the License,
-// or (at your option) any later version.
-//
-// Licensees holding a valid commercial license may use this file in
-// accordance with the commercial license agreement provided with the software.
-//
-// This file is provided AS IS with NO WARRANTY OF ANY KIND, INCLUDING THE
-// WARRANTY OF DESIGN, MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-//
-// $URL$
-// $Id$
-//
-// Author(s) : Marc Glisse
-
-#ifndef CGAL_TYPESET_H
-#define CGAL_TYPESET_H
-#include <CGAL/config.h>
-#ifdef CGAL_CXX11
-#include <type_traits>
-#else
-#include <boost/type_traits.hpp>
-#endif
-
-// Sometimes using tuple just to list types is overkill (takes forever to
-// instantiate).
-
-namespace CGAL {
-#ifdef CGAL_CXX11
- template<class...> struct typeset;
- template<class H,class...U> struct typeset<H,U...> {
- typedef H head;
- typedef typeset<U...> tail;
- typedef typeset type;
- template<class X> using contains = typename
- std::conditional<
- std::is_same<H,X>::value,
- std::true_type,
- typename tail::template contains<X>
- >::type;
- template<class X> using add = typename
- std::conditional<
- contains<X>::value,
- typeset<H,U...>,
- typeset<H,U...,X>
- >::type;
- };
- template<> struct typeset<> {
- typedef typeset type;
- template<class X> using contains = std::false_type;
- template<class X> using add = typeset<X>;
- };
-#else
- template<class,class> struct typeset;
- template<class H=void, class T=typename
- boost::mpl::if_<boost::is_same<H,void>, void, typeset<void, void> >::type >
- struct typeset {
- typedef typeset type;
- typedef H head;
- typedef T tail;
- template<class X> struct contains :
- boost::mpl::if_<boost::is_same<H,X>,boost::true_type,typename tail::template contains<X> >::type
- {};
- template<class X,class=void> struct add;
- //boost::mpl::if_<boost::is_same<H,X>,typeset,typeset<X,typeset> >::type
- };
- template<> struct typeset<> {
- typedef typeset type;
- template<class X> struct contains : boost::false_type {};
- template<class X> struct add : CGAL::typeset<X> {};
- };
-
- template<class H,class T>
- template<class X,class>
- struct typeset<H,T>::add : typeset<H,typename T::template add<X>::type> {};
- template<class H,class T>
- template<class V>
- struct typeset<H,T>::add<H,V> : typeset<H,T> {};
-#endif
-
- template<class T1, class T2> struct typeset_union_ :
- typeset_union_<typename T1::template add<typename T2::head>::type, typename T2::tail>
- {};
- template<class T> struct typeset_union_ <T, typeset<> > : T {};
-
- template<class T1, class T2>
- struct typeset_intersection_ {
- typedef typename T1::head H;
- typedef typename typeset_intersection_<typename T1::tail,T2>::type U;
- typedef typename
-#ifdef CGAL_CXX11
- std::conditional<T2::template contains<H>::value,
-#else
- boost::mpl::if_<typename T2::template contains<H>,
-#endif
- typename U::template add<H>::type, U>::type type;
- };
- template<class T>
- struct typeset_intersection_<typeset<>,T> : typeset<> {};
-
-#ifdef CGAL_CXX11
- template<class T1, class T2>
- using typeset_union = typename typeset_union_<T1,T2>::type;
- template<class T1, class T2>
- using typeset_intersection = typename typeset_intersection_<T1,T2>::type;
-#else
- template<class T1, class T2>
- struct typeset_union : typeset_union_<T1,T2>::type {};
- template<class T1, class T2>
- struct typeset_intersection : typeset_intersection_<T1,T2>::type {};
-#endif
-}
-#endif